Enzymes Flashcards
Define “enzymes”
Protein catalysts of biologic origin which enhance the rates of biochemical reactions at a rate as to be compatible with life
What are the 5 general properties of enzymes?
- Not altered or consumed during the reaction
- Only small amounts of enzyme are required
- Enzymes accelerate the speed at which a chemical reaction reaches equilibrium, but does not alter the equilibrium constant
- Each enzyme is highly specific for a given reaction; they act on only one substrate
- Enzymes act by lowering activation energy
Occurs when the 3D structure begins to uncoil
Denaturation
High or low (blank) causes denaturation in enzymes
Temperature and pH
What is a cofactor?
Non-protein compounds required by some enzymes to make them active
What is an inorganic cofactor?
Activator
What is an organic cofactor?
Coenzyme
Complete cofactor: enzyme complex
Holoenzyme
What is a bound cofactor called?
Prosthetic group
The protein portion of the enzyme is the ____
Apoenzyme
A unique sequence and orientation of amino acids to form a pocket or groove that provides for the enzyme’s specificity for only a unique substrate
Active site
A region other than the active site where a separate compound reacts, altering the shape of the active site, altering its fit w/ the substrate; is used to regulate enzyme activity
Allosteric site
Different physical forms of an enzyme that all catalyze the same reaction
Isoenzymes
The quantity of an enzyme that will catalyze the reaction of one micromole of substrate per minute under defined conditions
International unit
Amount of enzyme catalyzed w/ a reaction rate of one mole per second
Katal
The rate of enzymatic activity increases as the concentration of substrate increased until the maximum velocity of the reaction is achieved. This max is called the _____?
Vmax
Half of the Vmax
Km
List examples of activators (inorganic cofactors) and coenzymes (organic cofactors)
Inorganic: Zn2+, Fe2+, Cu2+, Mg2+, Mn2+
Organic: NAD+, NADH, NADP+, NADPH, pyrixodal-5-phosphate
Why is enzyme activity, rather than ezyme concentration, measured in the lab?
The amount of enzyme is so small, that it’s difficult to devise assays sensitive enough. Instead, the rate of product formed or amount of substrate consumed during reaction is measured. The more enzyme present, the faster the reaction proceeds.
Initial period when enzyme and substrate are first mixed, but no product is formed yet, so there is no detectable change in absorbance
Phases of an enzymatic reaction:
lag phase
Rate of product formed is linear w/ time, so reaction follows Beer’s Law
Phases of an enzymatic reaction:
log (linear) phase
No change in absorbance b/c there is no substrate left to be converted to product. Rate of reaction is dependent on substrate concentration not enzyme concentration.
Phases of enzymatic reaction:
Substrate depletion phase
Why should enzyme measurements be made during the log phase?
It corresponds to zero order kinetics! It follows Beers Law so it is an accurate measurement
For a typical enzyme measurement curve, how are the axis labeled?
X: time (seconds)
Y: change in absorbance
Enzyme Curve Zero order kinetics
- Define
- Where on graph
- The rate of the reaction is independent of reactant (substrate)
- Corresponds to Log (linear) phase on the graph
Differentiate endpoint and kinetic (multiple point/rate/continuous monitoring) enzyme methods, including why kinetic methods are preferred to endpoint methods for enzyme assays
Substrate depletion is observable telling us to dilute the sample
Michaelis-Menten curve:
- Zero Order kinetics
- Where on curve
At the end of the curve when it starts to flatten out
Michaelis-Menten curve:
- First Order kinetics
- Where on curve
At the beginning of the curve were it is increasing
Michaelis-Menten curve:
How are the axis labeled?
X: [S], concentration of substrate (mol/L)
Y: V, initial reaction rate (mol/Ls)
Michaelis-Menten curve:
Vmax and Km on the curve
Vmax: Highest point curve goes
Km: half way up the Vmax
6 factors that influence enzymatic activity
- enzyme concentration
- substrate concentration
- temperature
- pH
- presence of cofactors
- presence of inhibitors
Define plasma-specific enzymes
Expected to be in higher concentration in blood b/c they function there (i.e., coag factors–fibrinogen, thrombin)
Define non-plasma specific enzymes
Have no function in the plasma; function in tissues (cellular metabolism, etc.) (e.g., LD or CK)
Two GENERAL mechanisms for increased enzymes
- increase in rate of enzyme being released into bloodstream
- increase in rate of production of enzyme
7 specific causes of cell damage or death
- hypoxia
- chemicals and drugs
- physical agents
- microbiological agents
- immune mechanisms
- genetic defects
- nutritional disorders
2 specific causes of increased enzyme production
- Enzyme induction (via drugs, alcohol, etc)
2. Proliferation of cells that produce that enzyme (cancer)
List 5 physiological factors which affect enzyme reference ranges
- Sampling time
- age
- sex
- race
- exercise (lack of and excessive)
Cholinesterase (ChE)
- In vivo reaction that is catalyzed
Hydrolysis of choline esters to form choline and the corresponding fatty acid at the neuromuscular junction
What are the 5 major liver enzymes?
- aspartate aminotransferase (AST)
- alanine aminotransferase (ALT)
- Alkaline phosphatase (ALP)
- Gamma-glutamyltransferase (GGT)
- Cholinesterase (ChE)
Aspartate Aminotransferase (AST) - Three biological sources
- Heart
- Skeletal muscle
- Liver
(4. Kidney)
Aspartate Aminotransferase (AST) - typical appearance, peak, and return to normal after myocardial infarction
Rises w/in 12 hours after onset of chest pain; peaks at 18-24 hours; normal w/in 4-5 days
Aspartate Aminotransferse (AST) - Two liver diseases that give rise to the greatest elevations
Liver (hepatocellular) Disease
- Viral hepatitis
- Liver carcinoma
Aspartate Aminotransferase (AST) - One muscular disease in which AST is elevated
Skeletal muscle disease (Muscular Dystrophy)
Aspartate Aminotransferase (AST) - If hemolyzed specimens are unacceptable
UNACCEPTABLE due to high intracellular concentration of AST
Alanine Aminotransferase (ALT) - principle biological source
Liver
Alanine Aminotransferase (ALT) - Relative use in the dianosis of liver disease, compared to AST
Useful in the diagnosis of acute and chronic liver disease; parallels the rise in AST activity
Alanine Aminotransferase (ALT) - Liver disease in which ALT is elevated
Hepatitis; ALT is higher and persists longer than AST
Alanine Aminotransferase (ALT) - If hemolyzed specimen is unacceptable
NO HEMOLYSIS
Alkaline Phosphatase (ALP) - Four principle biological sources of total ALP
- Liver
- Bone
- Intestine
- Placenta
Alanine Aminotransferase (ALT) - Two liver diseases that gives rise to the greatest elevations
- Hepatitis
2. hepatocellular carcinoma
Alkaline Phosphatase (ALP) - Hepatobiliary diseases in which ALP is increased
- Biliary obstruction
- Hepatitis
- Cirrhosis
- Infectious mono
- Metastic carcinoma
Alkaline Phosphatase (ALP) - Hepatobiliary disease which gives rise to ALP's highest elevations
Biliary obstruction
Alkaline Phosphatase (ALP) - Bone diseases in which ALP is increased
- Bone tumors
- Paget’s disease
- Rickets
- Osteomalacia
- Hyperparathyroidism
- Healing fractures
Alkaline Phosphatase (ALP) - Two bone diseases which give rise to ALP's highest elevations
- Bone tumors
2. Paget’s disease
Alkaline Phosphatase (ALP) - If hemolyzed specimens are unacceptable
Gross hemolysis NOT acceptable (slight is ok, but must be documented)
Alkaline Phosphatase (ALP) - Principle of the Bowers and McComb procedure using p-Nitrophenylphosphate
Reference method; kinetic method that uses pNPP as a substrate and measures the rate of p-Nitrophenoxide release in AMP buffer
Which specific isoenzymes may be distinguished using the heat stability, urea denaturation, amino acid inhibition, and electrophoretic techniques?
Alkaline Phosphatase (ALP)
Alkaline Phosphatase (ALP) - Why is the reference range higher in children than in adults?
Due to rapid bone growth
Gamma-glutamyltransferase (GGT)
- Two principle biological sources
- Liver mainly
2. Kidney
Gamma-glutamyltransferase (GGT)
- clinical usefulness in the diagnosis and monitoring of chronic alcoholism
GGT is induced by alcohol and other drugs; used as a marker to check for abstinence from alcohol
Cholinesterase (ChE)
- Three clinical applications of measuring decreased ChE activity
- Assess exposure to organophosphates found in insecticides and nerve gas
- Check how patient will react to general anesthesia
- Assess presence of cirrhosis, hepatitis, liver carcinoma (due to decreased production)
Acetylcholinesterase (AChE)
- Biological sources
- RBCs
2. CNS
Cholinesterase (ChE)
- Biological sources
- Liver
- White matter of brain
- Serum
Creatine Kinase (CK) - In vivo reaction it catalyzes
Catalysis for ATP formation and phosphorylation of creatinine in energy production or usage
Creatine Kinase (CK) - Three principle tissue sources
- Skeletal muscle
- Cardiac muscle
- Brain
Creatine Kinase (CK) - dimeric composition and sources of its three isoenzymes
Composed of two subunits (M and B)
Isoenzymes formed: CKMM, CKMB, CKBB
Creatine Kinase (CK) - Typical appearance, peak, and return to normal after a myocardial infarction
Rises 3-8 hours after the onset of chest pain (1st to rise)
Activity peaks at 10-36 hours
Levels return to normal in 3-4 days
Creatine Kinase (CK) - One muscular disease that gives rise to CK's highest elevations
Duchenne’s Muscular Dystrophy (CKMM)
Creatine Kinase (CK) - Cerebral diseases in which CK is elevated
Cerebral vascular accident (CVA), stroke, verebral ischemia (CKBB)
Creatine Kinase (CK) - Principle of the Oliver and Rosalki method
Analytical procedure for total CK; increase in absorbance as NADP+ is oxidized and is measured at 340nm
Creatine Kinase (CK) - If hemolyzed specimens are acceptable
ACCEPTABLE
Lactate Dehydrogenase (LDH) - In vivo reaction it catalyzes
Catalyzes the interconversion of pyruvate and lactate in glycolytic pathway
Lactate Dehydrogenase (LDH) - Seven principle biological sources
- Brain
- RBCs
- WBCs
- Kidney
- Liver
- Lung
- Cardiac muscle
- Skeletal muscle
Lactate Dehydrogenase (LDH) - Typical appearance, peak, and return to normal after a myocardial infarction
Rises 8-18 hours after onset of chest pain
Peaks ~48-72 hours
Levels return to normal in 6-10 days
Lactate Dehydrogenase (LDH) - Liver diseases in which LDH is elevated
- Obstructive jaundice
- Cirrhosis
- Viral hepatitis
- infectious mononucleosis
- Toxic jaundice
Lactate Dehydrogenase (LDH) - Liver disease that gives rise to LDH's highest elevation
Hepatobiliary disease (metastatic cancer)
Lactate Dehydrogenase (LDH) - Two types of anemias in which LDH is elevated
- Megaloblastic anemia (can’t absorb vitamin B12)
2. Pernicious anemia
Lactate Dehydrogenase (LDH) - If hemolyzed specimen is unacceptable
Acceptable, but make a comment. Hemolysis increases LDH in vivo or in vitro
Aldolase (ALS)
- Three principle biological sources
- Skeletal muscle
- Liver
- Brain
Aldolase (ALS)
- One disease state in which ALS is elevated
Muscle dystrophy; can measure along w/ CK, which will also be greatly elevated
Amylase (AMS)
- In vivo reaction it catalyzes
Breakdown of starch into amylose
Amylase (AMS)
- Two principle biological sources
- Pancreas (40% of total AMS)
2. Salivary glands (60% of total AMS)
Amylase (AMS)
-Clinical significance of macroamylase
AMS is bound to IgG or IgA, causing an increase in total AMS w/o apparent disease
Amylase (AMS)
- Clinical usefulness of AMS measurements in the diagnosis of acute pancreatitis, chronic pancreatitis, and the mumps
Acute pancreatitis - Increased in serum shortly after onset (may be detectable in urine) - Peaks w/in 24 hours - Returns to normal w/in 4 days Chronic pancreatitis - ?? Mumps - AMS is increased
Amylase (AMS)
- What method measures amount of sugars formed from hydrolytic activity of AMS
Saccharogenic
Lipase (LPS)
- Two diseases in which LPS is elevated
Acute and chronic pancreatitis
Lipase (LPS)
- A comparison b/w the usefulness of LPS and AMS measurements in the diagnosis of pancreatitis
Levels parallel AMS appearance, but LPS is more specific than AMS
Lipase (LPS)
- Principles of turbidimetric/nephelometric procedures
Olive oil emulsion is hydrolyzed by LPS, causing a DECREASE in turbidimetry
Lipase (LPS)
- Principle of coupled enzymatic analytical procedure
LPS hydrolyzes fatty acids to form free glycerol which is quantitated colorimetrically
Acid Phosphatase (ACP) - Clinical usefulness of performing ACP measurements
Used to diagnose diseases of the prostate; can also do a prostatic acid phosphatase (PAP) and PSA
Glucose-6-phosphate dehydrogenase (G-6-PD)
- Biological sources
RBCs, adrenal cortex, LN, thymus, spleen
Glucose-6-phosphate dehydrogenase (G-6-PD)
-Disease state associated w/ LOW levels of G-6-PD
Hemolytic anemia (low levels of NADPH and glutathione which destroys Hgb causing RBCs to lyse)
Four major coenzymes used in electron transfer reactions commonly employed in enzyme assays in the lab, including specific wavelength for measurement
NAD+, NADH, NADP+, NADPH @ 340nm
Clinically significant enzymes/lab findings
- Myocardial infarction
Increase in: CKMB, AST, LDH
Clinically significant enzymes/lab findings
- Liver (hepatocellular) disease
AST, ALT
Clinically significant enzymes/lab findings
- Liver (hepatobiliary) disease
GGT, ALP
Clinically significant enzymes/lab findings
- Bone disease
ALP
Clinically significant enzymes/lab findings
- Brain disease
CKBB
Clinically significant enzymes/lab findings
- Prostate cancer and hypertrophy
ACP
Clinically significant enzymes/lab findings
- Acute and chronic pancreatitis
LPS, AMS
Clinically significant enzymes/lab findings
- Muscle disease and muscular dystrophy
CKMM, ALS
Amylase (AMS)
- What method uses dye-labeled starch substrates; as AMS hydrolyzes the starch, an increase in color is quantified
Chromilytic
Amylase (AMS)
- What method measures the decrease in starch substrate concentration as AMS works on starch?
Amyloclastic assays
Amylase (AMS)
- What method consists of a glucose coupled reaction and a hexokinase coupled reaction?
Enzymatic assays