Enzymes Flashcards

1
Q

Give examples of processes enzymes are used for.

A
  • Digestion
  • DNA and RNA synthesis
  • Energy production
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2
Q

What are the characteristics of enzymes?

A
  • Proteins
  • Biological Catalysts
  • Lower activation energy
  • Not altered or consumed during reaction
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3
Q

What are the two functional groups within the active site?

A
  • BINDING SITE - where substrate binds
  • CATALYTIC SITE - where reaction catalysed
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4
Q

Describe the enzyme-substrate complex.

A
  • Transiton state at high energy state
  • Intermediate between substrate and product
  • Reaction occurs by making/breaking bonds to form product
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5
Q

What are three types of specificity and what contributes to enzyme specificity?

A
  • ABSOLUTE - Catalyse one reaction type for single substrate
  • GROUP - Similar to absolute - for similar substrates
  • LINKAGE - Similar to absolute - for specific bond type
  • Tertiary structure contributes to specificity
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6
Q

Do enzymes alter ΔG?

A

No

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7
Q

Describe the lock-and-key model

A
  • Active site has a rigid shape
  • Only substrates with matching shape fit active site
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8
Q

Describe the induced fit model.

A
  • Active site is flexible
  • Shapes of enzyme, active site and substrate adjust to maximise fit, improving catalysis
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9
Q

Why is the optimum temperature for most enzymes 37 degrees?

A
  • Temperature at which enzymatic reaction occurs fastest
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10
Q

What occurs when pH increases to physiological pH?

A
  • Ionisation of functional groups
  • Optimum pH is usually 7
  • Varies depending on level of acidity of environment
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11
Q

When does Vmax occur?

A

Vmax - maximal activity
- Occurs when enzyme is saturated - all enzymes have bound substrate

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12
Q

What is the difference between an apoenzyme and holoenzyme?

A
  • APOENZYME - Inactive enzyme without its cofactor
  • HOLOENZYME - Active enzyme with its cofactor
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13
Q

What are cofactors?

A
  • Inorganic/organic non-protein components
  • Bound covalently or loosely to enzyme
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14
Q

What are coenzymes?

A
  • Organic non-protein components
  • Loosely bound to apoenzyme by non-covalent bonds
  • EXAMPLE: NAD and FAD
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15
Q

What are prosthetic groups?

A
  • Permanent part of tertiary structure
  • Tightly bound to apoenzyme by covalent bonds
  • EXAMPLE: Haem group in Hb
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16
Q

What is the purpose of ADH in the liver?

A
  • Oxidation of ethanol to acetaldehyde
  • Contains NAD
17
Q

Describe irreversible inhibition.

A
  • Covalent interaction with enzyme
  • Leads to modification of active site
  • Modified enzyme needs to be replaced
18
Q

Give example of irreversible inhibitors.

A
  • Neurotoxins
  • Inhibit acetylcholinesterase in synapses
19
Q

Define competitive inhibition.

A
  • Similar shape and chemical properties to substrate
  • Binds to and blocks active site
  • Greater inhibitor concentration = greater inhibition
  • Inhibition overcome by increasing [substrate]
20
Q

Define non-competitive inhibition.

A
  • Binds to site on enzyme other than active site
  • Reduced enzyme activity - no effect on substrate binding
  • Inhibition is reversible
21
Q

How does cyanide behave as a non-competitive inhibitor?

A
  • Binds to allosteric site of cytochrome C
  • ATP synthesis blocked due to inhibition of ETC
  • Cells respire anaerobically and lactic acid builds up
22
Q

Define uncompetitive inhibition.

A
  • Binds to ES complex
  • Increases enzyme affinity for substrate
  • Forms ES-inhibitor complex - inactive
23
Q

Define allosteric inhibition.

A
  • Inhibitor binds to modulator site
  • Enzyme conformation altered
  • Decreased catalytic activity of substrate at active site
24
Q

Define feedback inhibition

A
  • Enzyme inhibited by end product in biochemical pathway
  • Occurs with buildup of product
  • Negative feedback slows down production