Enzymes Flashcards
enzyme specificity
Absolute specificity
Protease -> protein
Lipase-> lipida
Group specificity
Enzyme act on a group of compounds
Stereospecificity
Enzyme that cat on optimal isomer
Race made and epimerase
Racemase- act on molecule with 1 chiral carbon
Epimerase - multiple chiral carbon
Enzyme purification is based on what
Size difference
Solubility diff
Charge diff
Selective absorption
Size diff is based on what
Dialysis
Ultrafiltration
Centrifugation
Gel filtration
Dialysis what is it and what is the problem
Enzyme is placed in a dyalisys bag and small molecule can diffuse bc of the small pores
Problems: every time there is an equilibrium dialysis cannot completely move the molecule
Ultrafiltration
Apply pressure in one side and force smaller molecule through membrane
Centrifugation
Larger molecules settle down faster
Gel filtration
Larger ones go down more quickly
Separation based on solubility is based on
Isoeletric preciptation
Salt fractionation
Solvent precepitation
Isoeletric preciptation
PH is adjust u t’il the net charge is neutral. PH ranges, diff enzymes have diff pIs and this is used to separate enzymes
Salt fractionation
Salts can alter charges on enzymes molecules
If you add salt more soluble
Solvent preciptation
Acetone or ethanol are used or decrease water activity you need to chill solvent to 0-4 degrés before adding the enzyme to prevent enzyme denaturation
Separation based on charge differences are based on
Ion exchange chromatography
Electrophoresis
Isolectric focusing
Ion exchange chromatography
Cation exchanger when + binds to -
Anion is the inverse
Electrophoresis
Based on size and charge
The larger the molecule the faster
Isoélectrique focusing
We genetate pH gradient in the gel by using ampholytes
Separation based on specific binding based on
affinity chromatography and hydrophobic interaction chromatography
Affinity chromatography
Ligand are bound to enzymes with resin
The principle of affinity chromatography is that the stationary phase consists of a support medium (e.g. cellulose beads) on which the substrate (or sometimes a coenzyme) has been bound covalently, in such a way that the reactive groups that are essential for enzyme binding are exposed. As the mixture of proteins is passed through the chromatography column, those proteins that have a binding site for the immobilised substrate will bind to the stationary phase, while all otter proteins will be eluted in the void volume of the column.
HIC: hydrophobic interaction chromatography
Bind hydrophobic material to enzymes after the unbound material are eluted and the bound material are next removed by pH change
Enzyme purity is tested by
Test for homeogeonity
Chromatographic behaviour
Active testing
Isolectric fusing
Test for homogeonity
Make sure is homogenous by electrophoresis. Serial band = pure