Embryology workshops 1 +2 Flashcards

1
Q

Explain the breif version of how mRNA is made from a gene?

A

Transcription factor binds to the promotor region
Primary transcript is formed by transcription
Undergoes splicing to remove introns
Addition of a 5’ cap and a poly A tail, this regulates mRNA translation, that will result in a protein

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2
Q

What makes up the structure of chromatin?

A

Nucleosomes (146bp) wrapped around histone proteins
Histones have tails that stick out from the complex

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3
Q

What is the function of histone tails?

A

The regions that are modified by epigenetics, undergo acetylation.

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4
Q

What is the difference between condensed and uncondensed histones?

A

Condensed nucelosomes - histone tails are largely methylated, compact complex
Uncondensed nucleosomes - histone tails are largerly acetylated, uncondensed complex

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5
Q

What is important to remember about histone modification?

A

There are many different types of chromatin compaction, each with different histone modifications.

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6
Q

What is the difference between hetero and euchrochromatin?

A

Heterochromatin - refers to chromatin that is highly condensed and is not readily available for transcription
Euchrochromatin - is not highly condensed and is easily accessible for transcription

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7
Q

What does collinearty mean in relation to hox genes?

A

They are arranged in the genome to reflect the order that they are expressed along the anterior/posterior axis of the body.

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8
Q

What is meant by a homeotic gene?

A

Regulates the development of anatomical structures in an organism.
They are typically regulatory genes, that act as transcription factors.
Give bodily sections an indentity.

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9
Q

What is the difference between patterning and segmentation?

A

Segmentation - splitting up into segments (indea that there are two different parts)
Patterning - identifying that a part will become a hand/leg, involves hox genes.

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10
Q

What is the difference between hox genes, homeotic genes and homeobox genes?

A

Hox genes - determine the identity of a segment
Homeotic genes - including hox genes, regulate organs that develop in the specific segment identity
Homeobox genes - includes homeotic genes, are a super family of transcription factors that regulate body plans and developmental control..

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11
Q

Why are enhancers and regulatory genes more important than the actual genes themsevles?

A

It is not how many genes we have but how we use them.
The same genes can be expressed in different regions, in different combinations with other genes and in different levels of expression
This is all regulated by enhancers.

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12
Q

What is the function of Pax6?

A

Expressed and functions in the lens, cornea, retina, neural tube and pancreas development.
Regulated by enhancers.
Mutations are responsible for malformations, often vision loss.

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13
Q

What is the legal time limit on growing a human embryo?

A

14 days.
However, since 2016 it is scientificially possible to grow an embryo past this stage.
Law in question due to the potentialy research and scientific gains from extending this time limit.

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14
Q

What is single cell transcriptomes?
What does analysising this tell us about cell identity?

A

Analysing the gene expression in one cell by comparing the level of mRNA
Differences between cells is due to different combinations and quantities of gene expression, not just the absence and presence of genes.

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15
Q

At what stage of gestation does it develop from an embryo to a foetus?

A

Embryo is week 3 to 8
A foetus is week 12 to 9 months

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16
Q

Define cleavage in relation to embryology.

A

Cell division by mitosis in the absence of cell growth

17
Q

Define implanatation in regards to embryogenesis

A

When the blastocyst implants into the endometrium wall. Occurs when trophoblast cells use L-selectin receptors to bind to oligosaccharides on the endometrial wall to form a loose connection, then solidified by integrin molecules
Tissue infiltration is mediated by enzymes that proteolyse extracellular tissue.

18
Q

Define gastrulation

A

Formation of the ectoderm, mesoderm and endoderm

19
Q

Define ingression in embryogenesis.

A

The movement of epiblast mesenchymal cells down through the primitive streak

20
Q

Define migration in the term of early embryogenesis.

A

Underlies morphogenic changes in embryological development
Mesenchymal behaviour throughout development

21
Q

Define chromatin

A

A combination of protein and nucleic acid regulated by acetylation.

22
Q

Where is an enhancer region located compared to the RNA polymerase docking site?

A

The enhancer region

23
Q

What is a basic protein that has a promnent tail?

A

Histone

24
Q

What is a megabase?

A

Used when determining the length of DNA
One megabase is 1 million bases long

25
Q

What is the most common aetiology in congenital heart malformations?

A

Mutation affecting a transcription factor gene leading to abnormal morphogenesis.

26
Q

What musculoskeletal cells give rise to tissue in the cranium and not in the trunk?

A

Neural crest

27
Q

What transcription factor genes are involved in the patterning of axes?

A

Hox genes

28
Q

What is the embryoblast another term for?

A

The inner cell mass in the blastocyst

29
Q

What is the blastocele?

A

The fluid filled cavity in the blastopore.

30
Q

Define chromosome

A

A thread like structures of DNA and protein that is tighlty coiled and compacted.
Made of condensed chromatin fibres.

31
Q

What process accompanies pre-somitic mesoderm formation?

A

Epithelial to mesenchymal transition

32
Q

What is a molecule of thousands of coding and non-coding sequences in a genetic stand point?

A

Chromosome.
NOT a gene because a gene is not a molecule