Drug Metabolism Flashcards
xenobiotic
drug or nonessential exogenous compound
metabolism
chemical modification of compounds by enzymes
sites of drug metabolism
liver gastrointestinal tract lungs kidneys brain skin
oral bioavailability
fraction of total dose that reaches systemic circulation
factors that influence bioavailability
solubilty
membrane permeability
P-gp efflux
presystemic first pass metabolism (intestinal, hepatic)
metabolism of a drug where in systemic circulation is most important for most drugs?
hepatic metabolism
Phase I drug metabolism
chemical modification (biotransformation) including oxidation, hydroxylation, etc. to introduce new functional group or expose group for Phase II reactions
Phase II drug metabolism
conjugation of polar group with drug
What is often the purpose of Phase II drug metabolism?
usually kills the activity of the drug - used for excretion
termination of xenobiotic action can be caused by which processes?
bioinactivation
detoxification
elimination
Bioinactivation and detoxification
the drug metabolite may be less active or completely inactive
Elimination
metabolism increases the polarity of drug molecules
How do you increase the polarity of drug molecules?
decreasing lipid solubility
increasing water solubility
Prodrug
the drug metabolite may be more active than the parent compound, or the parent compound may require activation for biological activity (bioactivation)
Toxification
compounds may be activated to biologically active metabolites that frequently cause adverse toxic effects
Explain the genotoxicity of polyaromatic hydrocarbons (found in cigarette smoke)
Phase I drug metabolism of these compounds can create reactive epoxides on the molecule. The planar molecule can then easily insert into DNA and create mutagenic DNA adducts.
What is the most frequent reason that new therapeutic agents are not approved by the FDA?
drug-induced hepatic damage
Explain the hepatoxicity of acetaminophen.
Acetaminophen is metabolized by cytochrome P450 to a reactive form that is normally conjugated to glutathione and eliminated. If you take too much acetaminophen you exhaust the supply of glutathione in the liver and the extremely reactive form created by CYP450 starts to react with many other things, causing toxicity.
How many cytochrome P450 enzymes are in humans?
57
1/3 of all drugs are metabolized by
CYP3A4
1/5 of all drugs are metabolized by
CYP2D6
What does the active site of CYP contain?
iron-heme confactor
maximal light absorption (Soret peak) of CYPs
450 nm
Important intrinsic factors for drug metabolism?
topography of protein binding site and steric hindrance of the access to the catalytic heme group
Factors that determine binding strength
coordination strength with heme iron
hydrophobic contacts with binding site of CYP
specific contacts with binding site residues
which molecules typically have a stronger affinity to the heme iron than molecules that coordinate with oxygen or carbon atoms
molecules with nitrogen as sixth iron-coordinating ligand
What can stabilizes the ligand-protein binding of CYPs?
additional hydrophobic contacts
Azo antifungal drugs (ketoconazole) are?
strong inhibitors for CYPs
Mechanism-based inhibition (MBI, suicide inhibition)
metabolism of substrate generates reactive metabolite that irreversibly interacts with the heme or residues in the binding site
significance of mechanism-based inhibition
further metabolism of same or other drug is delayed as CYP needs to be resynthesized