DNA Structure Flashcards

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1
Q

How many hydrogen bonds does A - T have

A

2

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2
Q

How many hydrogen bonds does G - C

A

3

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3
Q

DNA Helicase

A

unwinds the DNA strands, producing a Y-shaped replication fork

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4
Q

Topoisomerase

A

Cuts and rejoins DNA to prevent twisting in circular bacterial chromosomes

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5
Q

What keeps the opened DNA strands from reforming?

A

Single Stranded Binding Proteins

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6
Q

DNA replications happens in what direction? Meaning what direction are the parental helixes and what direction is DNA synthesized?

A

DNA replication happens: 5 to 3

The parental leading strand is 3 to 5 and the lagging is 5 to 3

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7
Q

Semi Conservative Replication

A

Each new strand of DNA has an old strand of DNA

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8
Q

What is at the end of each 3’?

A

Hydroxl Group

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9
Q

Ligase

A

Restitches DNA after it had been cut by topoisomerase

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10
Q

What does the Primase Enzyme do?

A

Lays down RNA primers

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11
Q

What does primase need in order to synthesize the RNA primer?

A

Hydroxl group on the 3’ end

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12
Q

In what direction does Primer lay down the RNA?

A

5’ to 3’

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13
Q

Primase and Polymerase read the strand?

A

3 to 5

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14
Q

What does Polymerase need to synthesize?

A

The hydroxl group on the 3’ end

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15
Q

Leading strand

A

only needs one primer to go continuously

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16
Q

Lagging strand

A

Has multiple Sequences of both Primer and DNA

17
Q

Okazaki Fragments

A

These are the multiple strands of DNA that are left after DNA polymerase type 1 gets rid of the primer

18
Q

What gets rid of the RNA primers?

A

DNA polymerase type 1

19
Q

DNA polymerase needs what in order to synthsize?

A

the OH group

20
Q

DNA Ligase

A

reattach the strands after DNA polymerase type 1 has synthesized the new DNA strands after getting rid of the primers.

20
Q

Difference between DNA polymerase Type 1 and 3

A

Type 1 takes off the primers and then synthesizes

Type 3 builds off of the primer RNA strand and synthesizes

21
Q

Conservative replication model

A

The old DNA strands are used as a template for the new DNA be made, however the old DNA rewind back together

22
Q

Dispersive replication model

A

each pair of DNA has pieces of the old and the new when it is replicated

23
Q

Sliding DNA clamp

A

attaches to the end of the DNA polymerase and increases rate of synthesis

24
Place when DNA replication starts
Origin of Replication (ori)
25
Ligase
After DNA Polymerase type 3 synthesizes along the Okazaki fragments, Ligase rejoins the strands
26
Why does the chromosome shorten?
Because once the primer is removed, there is only a 5' left and without that OH group, it shortens with each replication
27
Telomere
At the ends of each chromosome that have noncoding DNA
28
Telomerase
Expresses complementary nucleotides at the end of the 5' that is on the Telomer Active only in rapidly dividing embryonic cells, in germ cells – and in cancerous somatic cells
29
Proofreading mechanism
allows DNA polymerases to back up and remove mispaired nucleotides using 3′→5′ exonuclease activity to remove the newly added incorrect nucleotide
30
Base-excision repair
removing the erroneous base and replacing it with the correct one based on complementary pairing rules
31
Nucleotide-excision repair
removing an entire segment of DNA to repair bulky distortions