DNA repair Flashcards

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1
Q

when we think of repair what are the methods of repair based on ?

A

whether the damage is on one single strand or double strand

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2
Q

what are the methods of repair if the damage is happening to a single strand ?

A

either
base excision repair
nucleotide excision repair
mismatch repair

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3
Q

what are the different cycles of cell replication ?

A

G1 : growth and preparation
S : DNA replication
G2 : DNA error checking
M : mitosis

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4
Q

what is the process in which base excision repair happens ?

A

first enzyme involved is DNA glycosylase
lets go of the damaged base (AP base )
then AP endonuclease rmoves thee 5’ end of the chain
AP lyase attacks the 3’ end of thee chain
DNA polymerasee adds a nucleeotide
DNA ligasee glues the end together

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5
Q

at what stage of the cell cycle does base excision repair happen ?

A

all through out the cell cycle

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6
Q

at what stage of the cycle does nucleotide excision repair happen ?

A

happens in the G1 phase

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7
Q

when does nucleotide excision repair need to happen and not the other repair types ?

A

when there is a pyrimidine dimer that iis aa result off UV damage

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8
Q

what is the clinical association of nucleotide excision repair ?

A

if it is defective it is associated with xeroderma pigmentosum

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9
Q

when does nucleotide excision repair happen ?

A

active in the S and G1 phase

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10
Q

when does mismatch repair happen ?

A

during the s phase
happens when the proof-reading effect off dna polymerase leaves mistakes

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11
Q

removal of any base pair is facilitated by what type of enzyme ?

A

endonuclease

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12
Q

iff there is a defect in the mismatch repair system what is the end result ?

A

we gget micrrosateellitee iinstability

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13
Q

what does lots of micro-satellite instability lead to clinically ?

A

HNPCC also known as lynch syndrome

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14
Q

what are thee mutations sen in lynch syndrome ?

A

MLH1 and MSH2

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15
Q

what are the methods of repair when there is double strand damage ?

A

homologous end joining
non homologous end joining

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16
Q

what are the differences between homologous and non homologous end joining ?

A

sister chromatid is used as a template in homologous , slower but more accurate process

non homologous there is no sister chromatid , fasteer but less accurate process

17
Q

what if there is a dysfunction in homologous and non homologous end joining ?

A

homologus - BRCA1 and BRCA2 fanconis anemia
non homologus - ataxia tenelgectasia