DNA Flashcards

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1
Q

nucleoside

A

sugar + base

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2
Q

deoxyribose + thymine

A

=> deoxy-thymidine

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3
Q

deoxyribose + adenine

A

deoxy-adenosine

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4
Q

deoxyribose + guanine

A

deoxy-guanosine

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5
Q

deoxyribose + cytosine

A

deoxy-cytidine

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6
Q

telomeres

A
  • highly repetitive DNA
  • that allow chromosomes ends to be replicated
  • also protect ends of chromosomes being mistaken as broken
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7
Q

origin of replication

A
  • special seq where duplication of DNA begins
  • each chromosome has many origins
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8
Q

how is dsDNA molecule packaged in eukaryotic cells?

A
  • packaged into chromosomes…
  • through interactions with specialised proteins
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9
Q

nucleoli

A

regions where…

  • chromosomes carrying RNA cluster
  • rRNAs are synthesised
  • ribosomes are assembled
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10
Q

2 types of chromatin

A

euchromatin:

  • less compact DNA form (“open”)
  • contains genes that are frequently expressed

heterochromatin:

  • more compact
  • contains DNA that is not transcribed
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11
Q

genome

A

complete set of genes of organism

(all DNA in cell)

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12
Q

genomics

A
  • genome-wide analysis of…
  • gene structure & expression
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13
Q

gene

A

section of DNA that codes for a protein

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14
Q

what does notation Tt mean to geneticists?

A
  • 1 dom allele
  • 1 recessive allele
  • would see phenotype of T
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15
Q

explain why RNA is less stable than DNA

A
  • RNA chemically more reactive than DNA -> due to ribose sugar having 2’ OH group (attracts ox.)
  • RNA more prone to mutation -> Cytosine deanimation to Uracil cannot be detected & repaired by RNA
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16
Q

suggest why transcription may not take place

A
  • RNA polymerase doesn’t bind to DNA without transcription factors present
  • transcription factors must bind to control region

^if these things don’t happen => no transcription

17
Q

what types of RNA are transcribed from DNA?

A
  • mRNA -> encodes proteins
  • tRNA -> act in protein synthesis as adaptors between specific codon seqs on mRNA & a.a
  • rRNA (ribosomal) -> forms part of ribosome & catalyses protein synthesis
  • small RNAs (eg. small nuclear RNA snRNA) -> used in…
    -> pre-mRNA processing
    -> transport of proteins to ER
    -> other cellular processes
  • miRNAs (micro) -> act in regulation of gene expression, inc. inhibiting translation & cleaving mRNAs
18
Q

the central dogma

A

DNA ——–> RNA ——-> a.a chain ——-> protein
transcription - translation - folding

19
Q

what do you need to replicate DNA in a test tube?

A
  • DNA polymerase enzyme & Mg²⁺
  • dNTPs (dATP, dCTP, dGTP, dTTP)
  • single stranded template DNA
  • primer 3’-OH

-> DNA synthesis will proceed in 5’ -> 3’ direction

20
Q

lagging strand synthesis in bacteria

A
  1. primase synthesises short RNA oligonucleotides (primer) copied from DNA
  2. DNA pol. 3 elongates RNA primers with new DNA
  3. DNA pol. 1 removes RNA at 5’ end of neighbouring fragment & fills gap
  4. DNA ligase connects adjacent fragments
21
Q

explain why E.coli (bacteria) has a faster bp/s than eukaryotes

A

E.coli has high processivity because DNA pol. attaches to sliding clamp