Diseases and Mutations Flashcards
Chromsome for NF1
17
- Mode of Inheritance: Autosomal Dominant
- Defective gene:- loss of function mutations of NF1 gene, neurofibromin
- chromosome 17
- disorder of nervous system
- Phenotype: eyes (lisch nodules/multiple iris hamartomas), skeleton, skin (café au lait spots), benign and malignant tumors of nervous system,
- Pleiotropic - variable expressivity -allelic heterogeneity - Signs develop during childhood
- Affects tumor suppressor protein Ras GTPase
Neurofibromatosis (NF1)
Chromosome for Achondroplasia?
4
Defective gene for Achondroplasia?
FGFR3
- Mode of Inheritance: Autosomal Dominant, gain of function
- Defective gene: Mutation in fibroblast growth factor receptor 3 gene (FGFR3)
- Chromosome 4
- Most common mutation is in Guanine at position 1,138
- Phenotype: Small stature, short limbs, large head, low nasal bridge, prominent forehead, lumbar lordosis
- new gain-of-function mutation
Achondroplasia
- Mode of Inheritance: Autosomal Dominant
- Cutaneous xanthomas, premature coronary artery disease, high blood cholesterol levels
- mutation in Low-Density Lipoprotein (LDL) receptor
Familial Hyperchoesterolemia
- Mode of Inheritance: Autosomal Dominant
- Defective Gene: mutation in PKD1 (chromosome 16) and PKD2 (chromosome 4)
- cyst development requires “two-hit” mechanism, both alleles of either PKD1 or PKD2 must lose function for cysts to form
- Progressive renal failure, renal and hepatic cysts, intracranial saccular aneurysms, mitral valve prolapse, colonic diverticula
Polycystic Kidney Disease
Chromsome for Marfan’s
15
Defective gene for Marfan’s?
FBN1
- Mode of Inheritance: Autosomal Dominant
- Phenotype: Disproportionate tall stature and skeletal abnormalities, hypermobile joints, ocular abnormalities (detached lenses), cardiovascular diseases, aortic rupture
- Defective gene: Mutation in the FBN1 gene coding for fibrillin-1 - chromosome 15
Marfan’s Syndrome
- Mode of Inheritance: X-linked Recessive
- Phenotype: blood fails to clot normally, bleeding into soft tissues, muscles, and weight bearing joints
- Defective gene: Due to deficiency of factor VIII (F8) gene
- incidence is 1 in 5000-10000 newborn males
Hemophilia A
- Mode of Inheritance: X-linked Recessive
- Phenotype: blood fails to clot normally, bleeding into soft tissues, muscles, and weight bearing joints
- Defective gene: Due to deficiency in factor IX (F9) gene
- incidence is rare at 1 in 100000
Hemophilia B
- Mode of Inheritance: X-linked recessive
- Phenotype: progressive myopathy
- Defective gene: deletion of dystrophin gene
- Frequently due to de novo mutations of large deletions (60-65%) and duplications, or small deletions, insertions or nucleotide changes
Duchenne Muscular Dystrophy (DMD)
- Mode of Inheritance: X-linked Dominant
- normal prenatal and neonatal growth and development followed by rapid onset of neurological symptoms and loss of milestones between 6 mos and 18 mos of age
- Phenotype: spastic, ataxic, autistic features, irritable behavior, purposeless flapping movements, seizures (50%)
- patients become severely retarded
- Defective gene: mutation in MECP2, methyl-CpG-binding protein 2, which mediates transcriptional silencing
Rett Syndrome
- Defective gene: mutation in MECP2, methyl-CpG-binding protein 2, which mediates transcriptional silencing
Rett Syndrome
Chromsome for Huntington’s
4
- Mode of inheritance: Autosomal Dominant
- Progressive disorder: motor: chorea and dystonia (involuntary movements and spasms), cognitive, and psychiatric changes
- Age of onset about 35-44 yrs
- Defective gene:Caused by an expanded polyglutamin repeat in the protein Huntington (Htt) causing protein to aggregate and damage neurons
- Expansion of CAG trinucleotide repeats in Htt
- Chromosome 4p16.3
- CAG codes for glutamine, normal 40 CAG repeats
Huntington Disease
- Defective gene: Caused by abnormal CGG repeat >200 leading to hyper-methylation of 5’ UTR and decreased FMR1 (Fragile X Mental Retardation 1) expression
Fragile X Syndrome
- Mode of inheritance: X-linked Dominant
- Phenotype: Big ears, big upper jaw, mental retardation and macroorchidism and deep plantar creases
- Defective gene: Caused by abnormal CGG repeat >200 leading to hyper-methylation of 5’ UTR and decreased FMR1 (Fragile X Mental Retardation 1) expression
Fragile X Syndrome
Chromsome for Myotonic Dystrophy-
19
- Defective gene: DMPK (dystrophia myotonica-protein kinase) gene undergoes repeat expansion of CUG triplet in the 3’ UTR of the mRNA
Myotonic Dystrophy
- Mode of inheritance: Autosomal Dominant
- notorious lack of penetrance, pleiotropy, and variable expression in clinical severity and age of onset
- phenotype: distal weakness and wasting, facial weakness, myotonia, cataracts, heart issues, GI issues, respiratory muscle issues, mental retardation, diabetes, hypogonadism
- Defective gene: DMPK (dystrophia myotonica-protein kinase) gene undergoes repeat expansion of CUG triplet in the 3’ UTR of the mRNA
- Chromosome 19
Myotonic Dystrophy
Chromsome for Friedreich Ataxis
9
- Defective gene: due to GAA repeat expansion of 100-1,200 in the first intron of Frataxin gene impairing transcriptional elongation
Friedreich Ataxia (FRDA)
- Mode of Inheritance: Autosomal recessive
- incoordination of limb movements, difficulty with speech, diminished/absent tendon reflexes, cardiomyopathy, scoliosis, foot deformities
- Defective gene: due to GAA repeat expansion of 100-1,200 in the first intron of Frataxin gene impairing transcriptional elongation
- chromosome 9
Friedreich Ataxia (FRDA)
- Defective gene: mutations in 1 or more of RET (receptor tyrosine kinase), RET ligand GDNF (glial cell line-derived neurotrophic factor), EDNRB (endothelin B receptor) and its ligand endothelin3 (EDN3)
Hirschsprung Disease (HSCR)
- Mode of possible Inheritance: Autosomal Dominant (LOF), recessive, and multifactorial
- Complete absence of some or all of the intrinsic ganglion cells in the colon
- severe constipation, megacolon
- Defective gene: mutations in 1 or more of RET (receptor tyrosine kinase), RET ligand GDNF (glial cell line-derived neurotrophic factor), EDNRB (endothelin B receptor) and its ligand endothelin3 (EDN3)
- chromosome 10q11.2, 3p21, and 19q12
Hirschsprung Disease (HSCR)
- Autoimmune destruction of islet Beta cells in pancreas
- Loss of insulin production
- usually manifests in children or adolescence
- polydipsia, polyuria
- a genetic factor is MHC class II locus (HLA-DR3 or HLA-DR4) - DQB10201 allele (DR3) or DQB10302 allele (DR4)
Type 1 Diabetes Mellitus
- Late onset after age 60
- protein misfolding of Amyloid Precursor Protein (APP) creating neurotoxic peptide (AB1-42)
- loss of memory, dementia, mood swings, B-amyloid neuritic plaques, neurofibrillary tangles, abnormal cleavage of amyloid precursor protein by alpha, beta, gamma secretases
- Tau protein normally organizes microtubules but abnormal post-translation hyperphosphorylation causes tangles
- ApoE (apolipoprotein E-involved in cearing LDL from the liver) gene disfunction [chromosome 19] e4 allele
Alzheimer Disease
-failure of fusion of the arches of the vertebrae with varying degrees of severity, typically in lumbar region
Spina bifida
- most common congenital malformation
- failure of fusion of the frontal process with maxillary process
- maternal smoking is a known risk factor
Cleft Lip and Palate
- genetic and environmental factors
- males have a higher risk
- hypertension, obesity, and diabetes mellitus are risk factors
- environment factors are diet, physical activity, and smoking
- obstruction of arteries feeding the heart
- kills about 450,000 people in the US yearly
Coronary Artery Disease (CAD)
- symptoms include fever, difficulty breathing, productive cough with greenish sputum
- history of recurrent lower respiratory tract infections and foul smelling diarrhea
- mild cyanosis, tachycardia, clubbing of fingernails
- high sweat sodium and chloride concentrations in sweat test
- Defective gene: Caused by autosomal recessive mutation in CFTR gene (deltaF508): a deletion of phenylalanine at position 508 leading to inability of protein to escape the ER - inability of cells to transport chloride and water to body secretions (lung, pancreas, sweat glands)
- Modifier genes: Mannose-Binding Lectin (MBL2) - plasma protein in innate immune system aiding in destruction of pathogenic organisms Transforming Growth Factor B1 (TGFB1) - promotes lung scarring and fibrosis after inflammation
- chromosome 7q31-7q32
Cystic Fibrosis
- IgG antibodies produced by the mother Rh- mother pass through the placenta and attack the RBCs of the Rh+ fetus causing hemolysis
- Treatment by injection of anti-Rh antibodies (Rho(D) immune globulin or RhoGAM) to destroy the fetal erythrocytes in her blood
Hemolytic Disease of the Newborn
- autosomal recessive
- iron overload
- mutant HFE gene in linkage disequilibrium with HLA-A*0301
Hemochromatosis
I = q^2
Autosomal Recessive (HWeq)
2q = I
Autosomal Dominant (HWeq)
I = q I = affected males
X-linked Recessive (HWeq)
- autosomal recessive
- post-axial polydactyly, congenital heart defects, prenatal tooth eruption, fingernail dysplasia, short-limbed dwarfism, short ribs, cleft palate, malformation of the wrist bones
Ellis-van Creveld (EVC) syndrome
- loss of genetic variation that occurs when a new population is established by a very small number of individuals from a larger population. As a result of the loss of genetic variation, the new population may be distinctively different, both genetically and phenotypically, from the parent population from which it is derived.
Founder Effect
- chronic inflammatory disease of the gastrointestinal tract - primarily adolescents and young adults
- Crohn disease (IBD1 locus linkage) and ulcerative colitis are 2 major categories
- NOD2 protein (nucleotide-binding oligomerization domain containing 2) gene- binds to gram-negative bacterial cell walls and participates in the inflammatory response to bacteria by activating the NF-κB transcription factor in mononuclear leukocytes; variants reduced ability of NOD2 to activate NF-κB leading to an abnormal inflammatory response
Inflammatory Bowel Disease (IBD)
- nocturnal abdominal pain, diarrhea, gradual weight loss - usually ileum and ascending colon
- granulomatous inflammation causing narrowing and scarring - arthritis of spine and joints, uveitis, skin issues, hypercoagulability, erythema nodosum
- treatment by corticosteroids, anti-inflammatory meds, antibiotics, immune modulators -presents in adolescence or young adulthood
Crohn Disease (CD)
- Defective gene: missense mutation in the 6th codon of the beta globin gene
- glutamate to valine missense
- hemoglobin with 2 normal alpha chains and 2 mutant beta chains (HbS)
- causes HbS hemoglobin to polymerize under deoxygenated condtions - anemia, failure to thrive, splenomegaly, repeated infections, and dactylitis
Sickle Cell Anemia
- Mode of Anticancer: Autosomal Dominant
- unstable hemoglobin with substitution of conserved phenylalanine with serine
- heme drops out of pocket, hemoglobin precipitates, low oxygen affinity, cyanosis
Hb Hammersmith
- Mode of Inheritance: autosomal recessive
- b-chain has a substitution at sixth amino acid from glutamic acid to lysine
- less soluble than Hb A, tends to crystallize in RBCs causing hemolysis
Hb C
- Mode of Inheritance: Autosomal Dominant
- His92 to Tyr - oxidized heme iron incapable of reversible oxygenation - cyanotic
Hb Hyde Park (a Hb M)
- Mode of Inheritance: Autosomal Dominant
- Asp99 to Asn - locks hemoglobin into relaxed structure with high oxygen affinity - polycythemia
Hb Kempsey
- disorder of alpha-globin production (chromosome 16)
- Hydrops fetalis- no alpha globin chains with high levels of Hb Bart’s (gamma globin tetramer = ineffective)
- Hb H - (4 beta subunits) loss of 3 alpha globin genes - severe anemia, splenomegaly - alpha - thalassemia trait - 2 functional alpha genes
- mild anemia and microcytosis - ZF deletion of alpha1-globin gene at 3’ end of LUC7L gene leading to antisense alpha2-globin RNA causing hypermethylation and thus gene silencing
alpha - Thalassemia disorders
- single-base pair substitution/point mutation
- severe anemia (Cooley’s anemia/thalassemia major) in B0 - B0 = no Hb A present - B+ = 10 to 30% Hb A detectable - hypochromic anemia, microcytic RBCs in B+ - chipmunk face
beta - Thalassemia
a benign condition because the remaining g gene or genes remain active after birth and Hb F (a2g2) compensates for the absence of Hb A
Hereditary Persistence of Fetal Hemoglobin (HPFH)