Developmental Biology Flashcards

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1
Q

Techniques for analysing development

A
  1. Description
    - Cellular description = direct observation of living embryos, needs transparency
  2. Physical manipulation
    - Removal of cells/tissues like cell isolation
  3. Genetics/molecular experiment
    - Forward genetics
    - Reverse genetics
    - Temp sensitive/epistasis
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2
Q

Developmental principles

A
  1. Development occurs by epigenesis
  2. Development starts with a single cell
  3. Progressive restriction in developmental potential
  4. Proliferation vs cell death
  5. Oriented + asymmetric cell divisions
  6. Epithelial sheets importance
  7. Developmental induction
  8. Developmental fields
  9. Boundaries (fields result in boundaries)
  10. Signalling between cells
  11. Choice of fate
  12. Morphogenesis and cell affinities
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3
Q

Benefits of using C elegans

A
  • Simple but has all major cell types
  • Easy to grow
  • Transparent
  • Different anatomy for XX vs XO
  • Genetic analysis can be used to study development
  • Vulva formation is a good example of tissue remodelling
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4
Q

Steps in vulval development

A
  1. Generating VPCs (3 fates 1o,2o,3o
  2. Vulval precuror patterning (in L3, signal from the gonad specifies 3 VPCs to generate vulval cells, typically 3-3-2-1-2-3)
  3. Generation of adult cells (can be VulA-F)
  4. Anchor cell invasion (forms hole in epidermis)
  5. Morphogenesis (forms 7 distinct toroids)
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5
Q

Generating VPCs

A
  • 11pnp cells are formed during L1 Laval stage

- How gene lin-39 = major determinant of VPC group + is expressed in p3p-p8p

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6
Q

VPC 1o, 2o and 3o pattern formation

A
  • 2 systems cooperate :
    1. graded signal of Lin-3 acting via Let-23
    2. sequential signal of DSL ligand acting via LIN-12
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7
Q

Anchor cell

A
  • Ablation prior to L3 stage completely blocks vulval development
  • AC produce Lin-3, whose action is graded
  • Vulvaless/multivulvaless mutations
  • Lin3-let23-sem5-let60-lin45-lin-1
  • Signalling terminates with modulation of TF like lin-1 that controls morphogenesis
  • Lin-31/lin-1 ETS complex are phosph. by MAPK → no inhibition of vulva
  • P6p receives most Lin-3, , p3p + p8p have negligible
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8
Q

Lateral inhibition

A
  • Stops adjacent cells also adopting primary fate
  • ## Genes involved in lin-12 activation are unregulated by Ras in p6p, lead to activation of lin-12/notch in p5p/p7p, helping p5p/p7p adopt 2o fate
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9
Q

Negative regulation of induction

A
  • 3 classes of SynMuv gene
  • Need mutation in 1 class A + 1 class B
  • Prevents wrong LIN-3 expression
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10
Q

Formation of axes

A
  • asymmetric divisions establish 3 major axes

- 5 asymmetric divisions produce 6 founder cells: AB, MS, E, C, D, P4

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11
Q

Establishing A/P axis

A
  1. Breaking symmetry (sperm assembles PCM, CYK-4, 1st cleavage → Ab1 + P1)
  2. PAR proteins (PAR 3+6 form complex w/ PKC-3, needs cdc-42 to maintain polarity, PAR1+2 localise in posterior cortex)
  3. P granules (form germline, start in cytoplasm, move to posterior of cell)
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12
Q

Spindle positioning

A
  • Heterotrimeric G protein acts ds of PAR to transduce polarity
  • GOA-1 + GPA-16
  • GRP1/2
    Dynein
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13
Q

Formation of D/V axis

A
  • 1st division → big AB, smaller P
  • AB = symmetrical division, controlled by PAR
  • P1 = asymmetric division, spindle oriented on AP axis
  • 2nd division → ABa, Abp, P2 + EMS
  • D + V axis different (only AB daughter cell has GLP-1 receptor, P2 has APX-1)
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14
Q

Formation of L/R axis

A
  • Determined by division of ABa/ABp
  • LH daughter are ↑ anterior to RH, causes cell to contract
  • EMS divides 1st to make E + MS
  • Then P2 divides to make C + P3 which divide again to make D + P4
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15
Q

Breaking symmetry

A
  • All cells have same developmental potential

- However end point = differentiation

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16
Q

1st step of symmetry breaking

A
  1. Maternal specification

2. De novo program

17
Q

Drosphilia Origins of polarity

A
  • A-P polarity of embryo
  • Maternal effect genes
  • Cooperation btw nurse and follicle cells
18
Q

Movement of oocyte nucleus

A
  • Nucleus moves from central posterior → asymmetrical anterior
  • Involves GRK, EGFR
  • Gurken mRNA
19
Q

Mutagenesis study

A
  • Heidelberg screen
    1. Maternal
    1. Zygotic
20
Q

Following fertilisation

A
  • Bicoid + hunchback gradients along AP axis
  • 3’UTR of nos can be replaced w/ 3’UTR of bcd mRNA
  • Nos inhibits translation of hb + bcd mRNA
  • BCD gradient
21
Q

Embryo segmentation

A
  • Mitosis
  • Syncytium
  • 13th division, 600 nuclei
22
Q

Gap genes

A
  • Mutant screens (3 points)
  • Regulated by maternal TF
  • Hunchback, Kruppel (7 total)
  • Gap proteins = TF, diffuse into syncytial cytoplasm
  • Regulate expression of pair-rule genes
23
Q

Pair rule genes

A
  • Transcribed in 7 broad strips
  • Some genes (even-skipped) are controlled directly by GAP proteins
  • Each stripe = gene activation
  • Regulatory elements = fused to LacZ reporter
  • Each stripe of pair rule protein defines a stripe of segment polarity expression
  • Each segment polarity gene is induced by 2 pair rule proteins → 14 segment polarity stripes
  • Nucleus → Cytoplasm
  • Makes a gradient
24
Q

Segment polarity genes

A
  • Overlaps of pair rule gene pattern causes activation of segment polarity
  • TF like engrailed
  • Mediate cell interactions
25
Q

Body patterning

A
  • Segments need to take on individual identities
  • ANT-C (head + anterior thorax)
  • BX-C (posterior thorax)
  • Homeodomain protein, homeobox
  • Hox genes
26
Q

Let-23 signalling

A
  • Originally ‘graded’ signal model (P6p most, decreases for others)
  • But, Let23 only needed in p6p
  • Sequential signal model