Cell growth + division Catherine Flashcards

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1
Q

Transcriptional activation of cell cycle

A
  • +ve feedback (move to next stage and repress previous)
  • pRb binds E2F to repress expression in G1, Cyclin D-Cdk4/6 phosph pRb
  • E2F induces cyclin E expression → cyclin E further phosph pRb → transcribes cyclin A
  • Cyclin A = -ve feedback, phosph E2F
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2
Q

Degradation of mitotic proteins

A
  1. SCF
    - Controls G1/S and G2/M boundaries
    - SCF substrates = cyclin D/E + CKIs like p27
  2. APC
    - Co-activators = Cdc20 + cdh1
    - Activated cyclin B → activated Cdc20
    - If free kinetochores, APC/C is inhibited by MCC
    - MCC turned over by TRIP13 → free APC
    - When kinetochores are attached to microtubules, ↓ formation of MCC but turnover of TRP13 carries on, ↓ inhibition on APC/C
    - Cyclin B then degraded
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3
Q

Regulation of proteolysis machinery

A
  • APC/C needs Cdc20/Cdh1 to bind
  • In early M, CDK phosph APC/C → Cdc20 binds → cyclins destroyed → ↓ CDK → anaphase
  • Cdh1 is phosphorylated during S, G2 + M, x bind APC
  • When exits M, Cdh1 is dephosph to activate APC. This ubiquit Cdc20 so x simultaneous activation of both
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4
Q

CKIs

A

Yeast
- Sic1p phosph Cdc28-cyclin, prevents premature S phase entry

Mammals

  • INK4 + CIP/KIP
  • p27 highest in Go + early G1, ↓ ↓ in G1/S
  • Prevent activation of cyclinE-Cdk2 or cyclinD-Cdk4
  • E2F → p27 transcription → cyclin E/ cdk2 inhibited → x pRb phosph (-ve feedback)
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5
Q

Regulation by phosphorylation

A
  • Cdc2 = inhibited at Thr14/Tyr-15 + activated at Thr161
  • Wee1/Cdc25
  • CAK = activating phosph
  • Cdk1 activates own activator Cdc25 + inhibits inhibitor, w/o cyclin B Cdk1 ↓, wee1 ↑ cdc25 ↓
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6
Q

DNA replication control

A
  • CDT1 needs to be free + dephosph
  • Geminin sequesters CDT1 but destroyed by APC in A
  • Cdt1 removed during DNA replication so PIC x re-assemble
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7
Q

GFR as oncogene more

A
  • Ligand binds to ectodomain → dimerisation → activates IC tyr kinase domain
  • Phosphotyr activates ds components
  • Point mutation to one that causes dimerisation + activated w/o ligand
  • Or chromosomal translocation, replaces EC domain w/ segment that dimerises
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8
Q

Intracellular transducer as oncogenes more

A
  • Ras mutations in Q61, G12 + G13
  • Q61 interfers w/ H20 coordination needed for nucleophilic attack
  • G12/G13 prevent van der waal btw Ras + GAP through steric hindrance which affects orientation of catalytic Gly at 61
  • Raf becomes oncogenic by mutation at Val600→ Glu600 (mimics activation loop)
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9
Q

TF as oncogenes more

A
  • Ras affects myc expression in 2 ways
    1. P13K = ds of Ras, inhibits GSK3 → prevents Myc being proteolysed
    2. Ras activates Raf-1 → activates MEK pathway → phosph of c-Myc
  • Myc = 40% of tumours
  • ↑ effects e.g. cyclin D, CDKs (activates Cdc25), E2F (myc stimulates CDK → phosph pRb → frees E2F, directly w/ E2F promoter) + CKIs
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10
Q

Oncogenes not involved in cell proliferation

A
  • Bcl-2 inhibits apoptosis
  • Tumour suppressors = also important e.g. p53
  • Telomerase + VEGF also oncogenes
  • Protein acts is important e.g. at branch vs in linear pathway
    + how easy to mutate
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11
Q

p53 vs pRb

Activation

A
  • p53 = phosph + stabilised by several kinases, Mdm2, ARF

- pRb = phosph

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12
Q

p53 vs pRb

Effects - cell cycle

A
  • pRb acts through E2F target genes, p53 acts directly via p53 target genes
  • pRb binds E2F and blocks transcription (can repair damage)
  • p53 acts through p21 (inhibit Cdk2, prevents inactivation by Prb)
  • p21 null mice are deficient in cell cycle arrest
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13
Q

p53 vs pRb

Effects - CIN

A
  • Experiments knockout
  • BubR1 can physically assoc. w/ + activate -53 during SAC checkpoint activation + p53 activates BUBR1
  • pRb loss affects mitotic fidelity
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14
Q

p53 vs pRb

Effects - Apoptosis

A
  1. Extrinsic
    - Phosph pRb means genes like caspase 7 are expressed
    - p53 induces expression of Fas TNF receptor
  2. Intrinsic
    - pRb induces MOMP by binding BAX
    - p53 induces expression of pro-apoptic genes
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15
Q

p53 vs pRb

Effects - metabolism

A
  • E2F null mice
  • p53 suppresses glucose transport directly by preventing GLUT1/4 transcription
  • Oxidative metabolism
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16
Q

p53 vs pRb

Effects - angiogenesis

A
  • E2F target genes = bFGF
  • Loss of pRb → activation of Id2
  • p53 inhibits HIF
17
Q

Apoptosis initiation

A

Extrinsic pathway

  • TM receptor-ligand or NK or cytotoxic T cell-mediated injection of granzymes
  • Death receptor - ligand → IC domain recruits adaptor
  • FADD recruits initiator caspases → form DISC → form executive caspases

Intrinsic pathway

  • Bax/Bad inhibited by Bcl2/Xl but BH3 sequesters Bcl2.XL → free Bax/Bad to homodimerise → outer membrane pore
  • Frees cytc which binds APAF1 + forms apoptosome → CARD domain recruits caspase 9 → activates executioner caspases like 3 + 7
  • Smac/Diablo → AIF + endonuc G
18
Q

Apoptosis execution

A

Nuclear effects

  • MOMP → AIF + endonuc G
  • Caspase dependent = RAIDD + RIPK1 compete for binding to PIDD + lead to survival or apoptosis
  • Caspase 2 = us of caspase 3 which cleaves ICAD → DNA fragment
  • Nuclear lamina degraded by caspase

Cytoskeletal effects

  • Caspases cleave ↑ components e.g. actin + myosin
  • Caspase-mediated proteolysis of ROCK1
19
Q

Apoptosis degradation

A
  • Phospholipid asymmetry + externalised PS
  • Bridge molecules = phagocyte recognition ligand
  • Some receptors bind directly to apoptotic cell
  • Internalise particle
20
Q

Apoptosis regulation

A
  • Bcl2/Xl block apoptosis by sequestering Bak/Bax
  • Pro-survival genes must be overwhelmed
  • Mit fission
  • Bcl2 = regulated by p53