Development Of Medicine Flashcards

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Explain small molecule drug discovery research and how it leads to the desired compound

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Small molecule drug discovery integrates genomics, proteomics, and computer-aided design to identify and screen potential drug molecules at high throughput speeds. Targets, often proteins like receptors or enzymes, are identified through research collaborations. Computer models predict molecule-target interactions, which are refined through automated screening techniques. Lead molecules are optimized by medicinal chemists to enhance efficacy and reduce side effects before advancing to development stage

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2
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Explain how monoclonal antibodies are used in medicine

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In contrast a small molecule medicines, biological medicines are often identical or similar to existing proteins e.g. insulin growth hormone and monoclonal antibodies the latter of which are similar to human immune system antibodies

Monoclonal antibodies are often the product of genetic engineering in creating fusion proteins where two or more genes are joined together to create a protein which has the biological activity from both genes for example cancer antibodies have one protein that specifically binds to cancer cells and I know that is toxic to it

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3
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Explain the concept of me to medicines

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Me-too medicines are drugs similar to existing ones, with the same mechanism of action but slight chemical modifications. They compete in the same market and may offer benefits like improved efficacy, fewer side effects, or better dosing.

Examples:
• Statins: Atorvastatin (Lipitor) vs. Simvastatin (Zocor).
• PPIs: Omeprazole (Prilosec) vs. Esomeprazole (Nexium).

Pros: More treatment options, potential improvements, lower costs.
Cons: Often lack true innovation and are marketing-driven.

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4
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What is pharmacokinetics?

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How likely it is to be absorbed distributed metabolism and excreted by the body

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5
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What is pharmacodynamics?

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How the potential medicine acts on the body it’s biochemical and physiological effects

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6
Q

What are the first three stages of pre-clinical development and what is their aim?

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In Silico (computer model) and in vivo which (animal studies) , in vitro (cell studies) are used to assess the pharmacokinetic, pharmacodynamicity, toxicity, efficacy

Drugs are not allowed to move to being tested in people due to strict legislation meaning that scientist and doctors need to be confident they can do human test without any undo risks to humans

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7
Q

Which pre-clinical safety studies are required before human trials

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Safety pharmacological studies focusing on effects on the cardiovascular, respiratory and nervous system

Short-term general toxicity up to 28 days repeat dosing in two species each of which should be a non-rodent

Genotoxicity looking for the effects of the medicine on DNA structure and integrity. This is usually AMES and chromosomes aberration test.

Long-term medicines also need their potential to cause cancer assessed

Other studies include reproductive toxicology adverse effect to feel development and offspring of treated animal as well as pre-and postnatal Tal development, fertility reproductive performances as well as long-term repeat dose toxicology stays

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8
Q

Explain the non-clinical safety evaluation of medicine

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Characterisation of toxic effects with respect to target organs

Dose depend

Establishing no effect level

Investigation of the relationship with exposure to the active ingredient

The potential for effects to be reversed

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9
Q

Explain the concept of good lab practice

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Good love practice and bodies principles that provide a framework which studies are planned performed monitored recorded reported and archived and is to help assure a regular authorities that the data is true reflection of the results obtained

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10
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What is good manufacturing practice?

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A minimum standard that must be met during the manufacturing of the active ingredient and the dosage which must match intended use as required by marketing authorisation and product specification

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11
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Who is responsible for inspections to assess GMP?

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The medicines and healthcare products regulatory agency or MHRAN agency if the department of health regularly does checks to comply with the GMP

Registered qualified person is legally responsible for certain batches of medical products using clinical trial prior to the release for sale

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12
Q

What is translational medicine?

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This is the skill of transferring research effectively from pre-Clinical (animal) to early clinical research in Man

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13
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Before a trial begins who gives permission for clinical trials to begin

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A Clinical Trial Authorisation (CTA) must be obtained from the MHRA, along with approval from the Health Research Authority (HRA) for governance and legal compliance. Independent medical, scientific, and ethical experts review the application. If the CTA is granted, the new medicine undergoes rigorous clinical trials before the company can seek marketing authorisation from a regulatory organisation.

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14
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What is the declaration of Helsinki and how does it relate to clinical trials?

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The declaration of Helsinki states that participants well-being in a clinical trial proceeds over gaining of any new scientific knowledge and it is considered within the international set of standards known as the ICH good clinical practice (GCP)

This is an EU directive which began as the EU Clinical Trails directive in 2001 and is now the EU clinical trials regulation 2014 although the UK has not caught up to this due to Brexit

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15
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What is an investigational medicinal product?

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This is where pharmaceutical industry sponsors have to demonstrate the safety quality and efficacy of a potential new medicine through a rigourous series of trials in humans in order to obtain a license so that doctors can give the medicines to patients?

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16
Q

Which phases of clinical trials take place whilst the medicine is on the market?

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Phase 4 clinical trials involve many thousands of millions of patients out in the world they are looking for additional characteristics of the benefit and risk through Pharma vigilance

How effective the medicine is impatient outside of Clinical trial how does the new medicine compare with similar medicines?

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17
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Give a brief overview of phase 1 clinical trials

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50 to 200 healthy subjects or patient who are not expected to benefit from the investigational medicinal product

Looking for safety profile in humans pharmacokinetics pharmacodynamics

Might be IMP be effective in treating patients with the target disease

This stage can also be described as a non-therapeutic unlike phase 23 and four

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18
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A brief overview of phase, two clinical trials

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100 to 400 patients with the target disease

Still assessing safety profile similar to phase one however efficacy can be tested as this is the first stage with people with the target disease

This is the first therapeutic stage or the first stage where the medicine has the intention of treating an illness and it involves different dosages to establish whether the compound is tolerated as well as in a healthy volunteers determining dosage for large scale studies phase 3

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19
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Explain phase 3 clinical trials

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1000 5000 patients with the target disease although some can be very large of 15 to 20,000 large numbers that allow for precise statistical evaluation of results and analysis of common side-effects

Further characterisation of safety and in-depth investigation into efficacy

Only occurs if phase 2 has good results and includes the new medicine compared with a placebo or active comparator medicine already in license patients are allocated randomly to one of the groups And neither the doctor nor the patient knows (randomise double blind control trial)

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20
Q

Data shows that only 64 to 67% of IMP progress to phase one to 2 and only 10 to 15% progress to the final stage of marketing and use in the public. What are the common reasons for this?

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They are not well tolerated or safe enough in humans

Pharmacokinetic or pharmacodynamic profile in humans is not good enough

Do not work or do not work well enough in patience with target disease

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21
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Explain phase 4 clinical trials

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Post marketing phase 4 trials are studied and performed while the drug is in the market

They study how well it works in the broader real word patient population it’s a long-term benefits and rare risks that cannot be picked up in clinical trials and the most effective way to use it

These may include post authorisation safety studies and post authorisation efficacy studies which may have been a requirement for granting marketing authorisation and these studies may yield important data on the economic aspects of the medicine and the health technology assessment

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22
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23
Q

Explain case control studies

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This is an epidemiological observational study which compares patients with the disease and past exposure to a certain factor to people who do not have the disease and if the exposure factor is higher in disease and in controls the suggests that the factor is associated with a particular disease

24
Q

Explain cross-sectional studies

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Give information about a medical situation at a particular time, for example, how many people have diabetes in the UK right now?

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Explain longitude or studies with mention to cohort study
Longitude or studies can be perspective or retrospective and show how a disease or treatment progresses over a period of time Cohort studies are when a group of people who are initially disease-free are followed over a study period of time this can be months days or years Framingham study of 5000 inhabitants of Massachusetts over a number of decades including their children and children spouses is a good example in the study of the risk factors for cardiovascular disease diseases
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Explain Pharma economic studies
These are studies which draw conclusions on the cost effectiveness of different treatments which provide evidence to the UK health and technology assessment buddies and the institute for health and care excellence (NICE)
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Why is it important to choose the correct clinical trial participants and what criteria are used?
Results and criteria can greatly differ depending on the cohort of participants used as drugs react differently in young old etc due to this we have to think about participants deeply and consider the following. It is important to include many different backgrounds so the results mirror the people who are going to use Disease severity Disease duration Patient’s age Patient body mass Existing medicines, pregnancy risk factors for harmful reaction Number of disease episodes per year if recurrent
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Explain why placebo trials aren’t used in clinical trials
In a placebo trial a placebo and non-effective substance is given to patients and this is used as the baseline however ethically it’s deemed that people need to be treated regardless so instead Group a is the IMP and group B is a comparative drug already in the market and all group a has to do is prove non-inferiority or superiority
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Explain the concept of double blind and random grouping
When neither the patient or doctor know which treatment the patient is the new medicine until the trial is finished To avoid bias in the person sorting the groups it is randomly assigned
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Clinical trials need to be scientifically sound and described in clear detailed protocol what type of things are included in this protocol?
Trial design must be shown Selection of subjects Treatment to be administered, including dose dosing schedule and treatment. Assessments to be made Other permitted and non-permitted medication How to monitor patient compliance How to assess efficacy How to assess safety including recordings and reporting adverse effects A description of the statistical methods to be employed The number of subjects plan to be enrolled Criteria for the termination of the trial
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Why has the current clinical trials directive been criticised by patient’s research is an industry?
Disproportionate regulatory requirements high cost lack of harmonisation the following features have led to a significant decline in clinical trials in the EU. Thus it is being replaced with the new EU clinical trial regulation which aims to restore the use competitiveness in clinical research with a patient orientated research back to Europe.
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Drugs have to go to approval from the MHRA and an independent research ethics committee via the HRA approval process. What does the independent ethics committee assess?
That the study is important and cannot be answered with an existing evidence The investigators are properly qualifies Patients are safeguarded and their information is adequate comprehensible and appropriate Sufficient resource resources, staff and finances are available The benefits will outweigh the risk Usually include an independent data monitoring committee known as a data and safety monitoring board which assess if the study should be continued or stopped based on interim evaluations. This may be if the side effects are larger than unexpected.
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What is the European public assessment report?
This is a copy of all trial results positive and negative given to the European medicines evaluations agency EMA these have the ability to change the marketing authorisation for the drugs okay? Got to statistics
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Explain what standard deviation is and how to calculate it
What is Standard Deviation? One standard deviation is calculated 68% of data point are expected to be within one standard deviation and 95% are expected to be within two Standard deviation (SD) is a measure of how spread out the values in a dataset are. It tells you how much the individual data points deviate from the mean (average) of the dataset. • A low standard deviation means the data points are close to the mean (less variability). • A high standard deviation means the data points are more spread out from the mean (more variability). How to Calculate Standard Deviation 1. Formula for Standard Deviation For a population (every possible data point is included):  For a sample (a subset of data is used):  Where: •  = population standard deviation •  = sample standard deviation •  = each data point •  = population mean •  = sample mean •  = total number of values in the population •  = total number of values in the sample 2. Step-by-Step Calculation 1. Find the Mean ():  Add all data points and divide by the number of values. 2. Subtract the Mean from Each Data Point:  This finds the difference between each value and the mean. 3. Square Each Difference:  Squaring removes negative values. 4. Find the Mean of Squared Differences: • For a population: Divide by  (total number of values). • For a sample: Divide by  (one less than the sample size). 5. Take the Square Root:  This gives the standard deviation. Example Calculation Suppose you have these five values: 2, 4, 6, 8, 10 1. Mean:  2. Subtract the mean from each value:  3. Square each difference:  4. Find the mean of the squared differences:  5. Take the square root:  Final Answer: Standard deviation = 2.83 This means that, on average, the data points are 2.83 units away from the mean.
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Explain relative risk and how you would work it out also called risk ratio
Risk Ratio (Relative Risk) – Key Points • Definition: Measures how much more or less likely an event (e.g., disease) is in an exposed group compared to an unexposed group. • Interpretation: • RR > 1: Exposure increases risk of the outcome. • RR < 1: Exposure reduces risk (protective effect). • RR = 1: No difference in risk between groups. • How to Calculate: 1. Find the risk in the exposed group (cases ÷ total exposed). 2. Find the risk in the unexposed group (cases ÷ total unexposed). 3. Divide the exposed risk by the unexposed risk. • Example: If smokers have a 10% risk of lung cancer and non-smokers have a 2% risk: • Risk Ratio = 10% ÷ 2% = 5.0 • Smokers are 5 times more likely to develop lung cancer. • Used In: Cohort studies to compare risk between groups.
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Explain absolute risk reduction and how you would work it out
Absolute Risk Reduction (ARR) – Key Points • Definition: Measures the actual difference in risk between two groups (e.g., those who receive treatment vs. those who do not). It shows how much a treatment or intervention reduces risk in absolute terms. • Interpretation: • Higher ARR: The treatment is more effective at reducing risk. • Lower ARR: The treatment has little impact. • How to Calculate: 1. Find the risk in the untreated/control group (cases ÷ total in control). 2. Find the risk in the treated/intervention group (cases ÷ total in treatment). 3. Subtract the treated risk from the control risk. • Example: • In a study, 10% of patients without a vaccine get the flu. • Only 2% of vaccinated patients get the flu. • ARR = 10% - 2% = 8% • The vaccine reduces flu cases by 8 percentage points. • Used In: Clinical trials to measure the actual benefit of a treatment.
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Explain relative risk reduction and how you would work it out
Relative Risk Reduction (RRR) – Key Points Essentially percentage change worked out with absolute risk reduction over control times 100 • Definition: Measures how much a treatment or intervention reduces risk relative to the original (untreated) risk. It shows the percentage reduction in risk due to the treatment. • Interpretation: • Higher RRR: The treatment is more effective at reducing risk. • Lower RRR: The treatment has less impact. • How to Calculate: 1. Find the absolute risk reduction (ARR) (risk in control group – risk in treatment group). 2. Divide ARR by the risk in the control group. 3. Multiply by 100 to express as a percentage. • Example: • Control group risk: 10% of patients without a vaccine get the flu. • Treatment group risk: 2% of vaccinated patients get the flu. • ARR = 10% - 2% = 8% • RRR = (8% ÷ 10%) × 100 = 80% • The vaccine reduces flu risk by 80% relative to the control group. • Used In: Clinical trials to compare the proportional benefit of treatments.
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Explain p value and confidence levels and it’s importance in tests
P-Value and Confidence Intervals – Key Points 1. P-Value • Definition: The probability of getting the observed results (or more extreme) if the null hypothesis is true. • Purpose: Helps determine whether an effect is statistically significant or just due to chance. • Threshold: Typically p < 0.05 is considered significant, meaning there is less than a 5% chance the result occurred by random variation. 2. Confidence Intervals (CI) • Definition: A range of values that is likely to contain the true population value with a given level of confidence (e.g., 95%). • Example: A 95% CI of 2.5 to 5.0 means we are 95% confident the true effect lies within this range. • Narrow CI: More precise estimate. • Wide CI: Less precise, more uncertainty. How They Are Related • A p-value < 0.05 suggests statistical significance, but a confidence interval gives more information by showing the range of possible values. • If a 95% CI does not include zero (for differences) or does not include 1 (for risk ratios), the result is statistically significant (p < 0.05). • CI helps understand the magnitude and reliability of an effect, while p-values only indicate significance. Example A study shows a new drug reduces blood pressure by 4 mmHg with: • p = 0.03 → Statistically significant. • 95% CI: 1.2 to 6.8 mmHg → The true effect is likely between 1.2 and 6.8 mmHg. • Since zero is not in the CI, the effect is likely real (p < 0.05). Takeaway: • Use p-values for significance (yes/no). • Use confidence intervals for precision and effect size (how big and reliable the effect is).
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Explain Number needed to treat and how you would work this out
Number Needed to Treat (NNT) – Key Points • Definition: The number of patients who need to receive a treatment for one additional person to benefit compared to a control. • Purpose: Helps assess how effective a treatment is in practical terms. How to Calculate NNT 1. Find the Absolute Risk Reduction (ARR) (risk in control group – risk in treatment group). 2. Calculate NNT:  (Use ARR as a decimal, not a percentage.) Example • A new drug reduces heart attack risk from 10% (control group) to 5% (treatment group). • ARR = 10% - 5% = 5% (or 0.05 as a decimal). • NNT = 1 / 0.05 = 20. Interpretation • NNT = 20 → You need to treat 20 people for one extra person to benefit. • Lower NNT = More effective treatment (e.g., NNT of 2 means treatment is very effective). • Higher NNT = Less effective treatment (e.g., NNT of 100 means limited benefit). Key Takeaways • Used in clinical trials to evaluate treatment impact. • Helps compare treatments to see which is more beneficial. • A lower NNT is better, but it must be balanced with risks and side effects.
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What features are statistically relevant in regards to sample size when planning a clinical trial?
Level of significance which is usually 0.0 5AP value of lesson 0.05 means that there is less than a 5% chance of incorrectly reporting a positive effect known as a type one error Power of the study when there is a difference will we be able to detect it? This is a Type II error and is usually set at 80% however sometimes 90 Expected effect of intervention or effect size involves making an estimate of how much difference the interval makes usually unlimited information a drug expected to have or shown a large effect may require smaller sample however the one with a smaller effect may require larger sample size Be expected degree of variability or standard deviation if you’re measuring a stock which is very variable you’ll need more people rather than a stat that is more tightly bound
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Explain an event driven clinical trial
This is a clinical trial where there is a specified end point based on events and a certain level of statistical data being hit instead of planning out and attempting to reach the amount of data to become significant for example the trial ends 100 people have had a heart attack
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What is a non-inferiority study and who sets the boundaries?
This is a study where two medicines are being conferred but just to make sure that the new one is no worse than the other although the new one may have better dosing schedule for example or alternative benefits Boundaries for non-inferiority are set beforehand and are accepted by regular two bodies such as the European medicines agency The accepted difference is generally smaller than the treatment benefit found in the placebo controlled superiority trials and the sample size required is usually bigger than those for superiority trials
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Explain how to account for missing data in the clinical trial
Intention to treat an ITT analysis is used this is where all randomise patients in the medicine group which regardless of the treatment they actually received there with draw and deviation from protocol counted. This does introduce an increased risk for type two errors. An alternative way to do this is ITT analysis with last observed carried forward with the last available measurement prior to the withdrawal is retained analysis Alternatively MITT which allows the exclusion of randomise subjects in a justified way for example they never started treatment Per protocol is an alternative form which is only performed on patients who have completed treatment specified in protocol Superiority trial is made by ITT although non-inferiority is both ITT and per protocol
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Explain autism, dominant and recessive inheritance
Dominant Inheritance • One mutated gene from one parent causes disease. • 50% chance of passing to children. • Seen in every generation. • Examples: Huntington’s, Marfan syndrome. Autosomal Recessive Inheritance • Two mutated genes (one from each parent) needed for disease. • 25% chance of affected child if both parents are carriers. • May skip generations. • Examples: Cystic fibrosis, Sickle cell anemia.
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Explain x linked inheritance
X-Linked Recessive • More common in males (who have only one X chromosome). • Females can be carriers (one faulty X) or affected (if both X chromosomes carry the mutation, which is rare). • Example diseases: Hemophilia, Duchenne muscular dystrophy, Red-green color blindness. • Inheritance pattern: • Affected fathers cannot pass it to sons (sons inherit Y from the father). • Carrier mothers have a 50% chance of passing it to sons (who will be affected) and a 50% chance of passing it to daughters (who will be carriers). 2. X-Linked Dominant • Affects both males and females, but females may have milder symptoms due to X-inactivation. • Example diseases: Rett syndrome, Fragile X syndrome. • Inheritance pattern: • Affected fathers pass it only to daughters (who inherit his X). • Affected mothers have a 50% chance of passing it to both sons and daughters. Key Points: • Males are more vulnerable to X-linked recessive conditions. • Fathers cannot pass X-linked traits to their sons. • X-inactivation in females can lead to variable expression of symptoms.
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Explain Y linked inheritance and given an example
This is when the gene on the Y chromosome is affected such as Y chromosome infertility which will affect all sons as they only get the Y chromosome from their father
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Explain codominant inheritance
Two different versions of alleles that are both expressed and both make slightly different protein example is ABO the group
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Explain mitochondrial inheritance
This is sometimes referred to his maternal inheritance as only females can pass mutations in the mitochondrial DNA to children while males can be affected. They cannot pass this on.
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Explain reduced penetrance
Reduced Penetrance – Key Points • Definition: When a person inherits a disease-causing mutation but does not show symptoms or has milder symptoms than expected. • Penetrance: The percentage of people with the mutation who actually develop the disease. • Complete penetrance = 100% (everyone with the mutation shows symptoms). • Reduced penetrance = Less than 100% (some people with the mutation do not show symptoms). Example • BRCA1 mutation: Increases breast cancer risk, but not all carriers develop cancer (penetrance is incomplete). • Huntington’s disease: Has high penetrance, meaning most people with the mutation will develop symptoms. Why Does It Happen? • Other genes may modify disease expression. • Environmental factors can influence symptom development. • Random chance—some people may never show signs despite having the mutation. Key Takeaway Reduced penetrance means having the gene does not always mean developing the disease.
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