Day 4.2.1 Flashcards
What is the first step in the replicative cycle of viruses?
attachment through a receptor
what are the specific receptors for hiv
cd4 on t cells
what are the specific receptors for rhinoviruses
ICAM on upper respiratory epithelial cells
what are the specific receptors for polio virus
immunoglobulin-like receptors
how do viruses enter a cell
after binding to specific recpetors - 2 methods -
receptor mediated endocytosis
membrane fusion
what method does influenza virus enter a cell with
receptor mediated endocytosis
what method do paramyxoviruses enter cells with
membrane fusion
name two viruses that enter cells through membrane fusion
herpesviruses
paramyxoviruses
name two viruses that enter a cell by receptor mediated endocytosis
influenza
adenovirus
how is uncoating of viruses triggered
by pH changes in endosomes
name a virus that undergoes uncoating due to pH changes
influenza A virus
name the processes by which viruses replicate and produce viral protein
transcription
translation
where do all dna viruses replicate
nucleus
what is the exception in dna viruses wrt site of replication
poxviruses (cytoplasm)
what enzyme do dna viruses use to replicate
host cell rna polymerase
where do all rna viruses replicate
in the cytoplasm of host cell
what enzyme do rna viruses use to replicate
own rna polymerase
what are the exceptions wrt site of replication in rna viruses
retroviruses
orthomyxoviruses
what are the steps in replicative cycle of viruses
attachment entry uncoating replication and viral protein production asssembly release
how are replicated viruses released from host cell?
2 methods
- budding
- host plasma membrane rupture
phases of one step growth analysis
- adsorption of virus
- eclipse phase
- synthetic phase
- latent period
how long does eclipse phase last
10-12 hours
what does the eclipse phase correspond to
the period during which the input virus becomes uncoated
what is the peculiar feature of the eclipse phase
no infectious virus can be detected during this time because it is undergoing uncoating
when does the synthetic phase start
around 12 hours post-infection
what does synthetic phase correspond to
the time during which new virus particles are assembled
during what period can no extracellular virus be detected?
latent period
what characteristics do orthomyxoviruses and paramyxoviruses share
spherical shape
single stranded rna
hemagglutinin
negative sense rna
what is the cytopathic effect of paramyxoviruses
syncytia formation
What virus doesn’t cross placenta?
measles
list viruses that cross placenta
rubella
herpes
hiv
cmv
viruses that cause respi disease in children
respiratory syncytial virus
parainfluenza viruses 1-4
rhinoviruses
adenoviruses
common viral causes of pharyngitis
coxsackievirus a
adenoviruses
orthomyxoviruses (influenza viruses)
EBV
common causes of viral gastroenteritis
rotavirus
noroviruses
sapoviruses
adenoviruses and astroviruses
what is the most common cause of viral gastroenteritis in children
rotavirus
noroviruses aka
norwalk virus
common cause of viral gastroenteritis in adults
adenoviruses and astroviruses
viruses that cause common cold
rhinoviruses
coronaviruses
adenoviruses
coxsackieviruses
most common pediatric viral diseases with a rash
measles rubella roseola (hhv 6) erythema infectiosum vzv
most common causes of aseptic meningitis
coxsackievirus
echoviruses
mumps viruses
what are the only dsRNA viruses
reoviruses
what are the most common cause of infectious diarrhea in infants and young children
rotaviruses
most common human disease caused by an arbovirus
dengue fever
most common cause of epidemic encephalitis
Japanese encephalitis virus
most common viral cause of mental retardation in US
cmv
which family comprises the genera rubiviruses and alphaviruses?
togaviruses
example of rubiviruses
rubella virus
example of alphavirus
arthropod borne viruses
how is rubella virus different from other togaviruses?
respiratory virus
does not cause readily detectable cytopathologic effects
five classic childhood exanthems
rubella measles roseola fifth disease chickenpox
typical picture of rubella
maculopapular rash that appears first on face and neck then quickly spreads to trunk and upper extremities then to legs
what disease shows first distinct then flushed appearance of lesions
rubella
what is the onset of rash accompanied by in rubella
low grade fever
how long does the rash in rubella last
3-5 days
rubella aka
3 day measles
how long does fever persist
not more than 24 hours
most prominent and characteristic symptom of rubella
lymphadenopathy of postauricular, occipital and posterior cervical lymph nodes
can lymphadenopathy in rubella occur in absence of rash
yes
what can be the effects of rubella infection during pregnancy
stillbirth
spontaneous abortion
congenital rubella syndrome
congenital rubella syndrome classical triad
cataracts
heart defects
deafness
how is staph aureus different from other staph
coagulase positive
how does s aureus infection begin
by traumatic inoculation of organism
what kinds of skin lesions do s aureus cause
boils
carbuncles
impetigo
scalded skin syndrome
what other than skin lesions do s aureus cause
abscesses sepsis osteomyelitis pneumonia endocarditis food poisoning toxic shock syndrome
what kind of toxins does s aureus produce
cytolytic
exfoliative
enterotoxins
toxic shock syndrome toxin
name the cytolytic toxins produced by s aureus
alpha beta delta gamma Panton-Valentine leukocidin
name the exfoliative toxins produced by s aureus
A
B
name the enterotoxins produced by s aureus
A - E, G, I.
superantigens
toxins (polypeptides) that bind to class ii MHC molecules on macrophages — interact with specific T cell receptors — massive release of cytokines by both macrophages and T cells
name 3 superantigens
Exfoliative toxin A
enterotoxins
TSST 1
what forms of coagulase do s aureus strains contain
2 - bound and free
function of bound coagulase
it is bound to the cell wall and can directly convert fibrinogen to insoluble fibrin and cause staph to clump
how does cell-free coagulase cause staph clumping
cell-free coagulase + globulin plasma factor (coagulase-reacting factor) = staphylothrombin (thrombin-like factor) —> catalyses conversion of fibrinogen to fibrin
how does staph clumping help staph
it helps them from phagocytosis
what other enzymes do staph produce
hyaluronidase
fibrinolysin
lipases
nuclease
hyaluronidase
hydrolyses hyaluronic acids
fibrinolysin aka
staphylokinase
what staph produce lipases
all s aureus strains
more than 30% coagulase negative staph
what is the function of lipases with staph
they hydrolyze lipids and ensure the survival of staph in sebaceous areas of the body
function of nuclease with staph
it is thermostable and hydrolyzes viscous dna
what is s aureus unable to do
invade through intact skin or mucous membranes
what does the cell wall of s aureus contain
ribitol phosphate teichoic acid
what kind of clusters do s aureus form
like bunches of grapes
what are s aureus
pyogenic gram positive cocci
predominant type of bacteria on skin
staph
corynebacteria
predominant bacteria on conjunctiva
sparse - gram positive cocci and gram negative rods
predominant bacteria on teeth
strep
lactobacilli
predominant bacteria on oral mucosa
strep
lactic acid bacteria
predominant bacteria in nares (nasal membranes(
staph
corynebacteria
(same as skin)
predominant bacteria in pharynx
strep
neisseria
gram negative rods
cocci
predominant bacteria in lower respiratory tract
none
predominant bacteria in stomach
H pylori
what % of stomach bacteria is H pylori
50%
predominant bacteria in in small intestine
lactics
enterics
enterococci
bifidobacteria
predominant bacteria in colon
bacteroides lactics enterics enterococci clostridia
difference between colon and small intestinal dominant bacteria
bifidobacteria exclusive to small intestine and bacteroides and clostridia exclusive to colon
predominant bacteria in anterior urethra
sparse - staph, corynebacteria, enterics (similar to skin, and enterics)
predominant bacteria in vagina during child-bearing years
lactic acid bacteria
predominant bacteria in vagina during non-child-bearing years
mixed
Main pathogenic Lancefield groupings for humans
A B C D G
what are lancefield groupings based on
antigenic characteristics of cell wall carb - C substance
common characteristics of streptococci
gram positive cocci arranged in pairs or chains most are facultative anaerobes catalase negative
schemes used to classify strep
serologic properties
hemolytic patterns
biochemical properties
serologic classification of strep
Lancefield groupings:
a, b, c, d, g
hemolytic patterns classification of strep
complete (beta [b])
incomplete (alpha [a])
no hemolysis (gamma [g])
what strains of strep are pathogenic for humans
group A
90 % of strep disease in humans is caused by
group A beta hemolytic strep - S pyogenes
what defines the virulence of the bacteria - strep
M protein
important components in the cell wall of S pyogenes
M protein
lipoteichoic acid
F protein
Toxins produced by Group A beta hemolytic strep
Streptococcal pyrogenic exptoxins (Spe) A, B, C,F
DNases A to D
Streptolysins O, S
Hyaluronidase
Streptokinase A, B
superantigens produced by Strep pyogenes
SpeA
SpeB
Spe = Streptococcal pyrogenic exotoxin
what are SpeA and SpeB associated with
severe infections characterised by:
rash
hypotension
multiorgan failure
high mortality rate
most common organisms to cause subacute endocarditis
oral streptococci
why? Alpha-hemolytic
what strep are alpha-hemolytic (oral strep)?
S viridans
S mutans
S sanguis
S salivarius
characteristic phases of population growth in bacteria
A - lag
B - log
C - maximum stationary
D - decline
decline phase aka
death phase
log phase aka
exponential phase
what happens to bacterial cells in lag phase
they are metabolically active but not dividing
what is the cellular activity during lag phase
resynthesis of enzymes, coenzymes etc necessary for growth
what happens to bacterial cells in log phase
bacteria are growing and dividing at an exponential (logarithmic) rate
What is the period of fastest growth in the bacterial growth curve?
log phase
what is the generation time in log phase
maximal and constant
what works best in log phase?
cidal antibiotics
what is the best phase to stain bacteria culture to study them?
log phase
why does total number of viable cells remain constant in maximum stationary phase
medium getting depleted in nutrients and toxic quantities of waste materials lead to reduction in number of new cells produced and increase in number of dying cells
what kind of bacteria contain endotoxins in their outer membrane of the cell wall?
gram negative bacteria
what is the biological activity of endotoxin associated with
lipopolysaccharide
what is the toxicity of endotoxin associated with
lipid component
what is the lipid component of endotoxin
Lipid A
what is the immunogenicity of endotoxin associated with
polysaccharide components
how does lipopolysaccharide activate complement
by alternative (properdin) pathway
which one is more potent - endo or exotoxin
endotoxin
which one is more specific - endo or exotoxin
exotoxin
which one has enzymatic activity - endo or exotoxin
exotoxin - often
which one is released by organisms - endo or exotoxin
exotoxin
which one is denatured by boiling - endo or exotoxin
exotoxin - usually
which one is antigenic - endo or exotoxin
both
which one forms toxoid - endo or exotoxin
exotoxin
which one is more pyrogenic - endo or exotoxin
endotoxin
which one is part of outer membrane - endo or exotoxin
endotoxin
which one is diffusible - endo or exotoxin
exotoxin
what is the difference in structure between endo and exotoxin
endo is lipopolysaccharide, exo is protein
which one is expressed by gram positive organisms only - endo or exotoxin
exotoxin