Damien Murphy Flashcards
What can be studied with EPR?
EPR is the acronym for Electron Paramagnetic Resonance Spectroscopy. It encompasses a large variety of techniques both in CW (continuous wave) and pulsed mode. The theory and fundamental physics of EPR is analogous to the better-known NMR technique. Paramagnetic states are used. We cannot study paramagnetic states with NMR
- Low power waves of a fixed frequency (9.5 GHz) contrinously irradiates a sample within a resonator while the applied magnetic field is swept.*
- EPR is a magnetic resonance technique used to study systems containing unpaired electrons. Such systems are paramagnetic and attracted my magnetic fields.*
- Organic free radicals in solution*
- Organic radicals in solids*
- Transition metal ions*
- Inorganic free radicals*
- Atomic and molecular gases*
- Biological samples*
- Photoexcited molecules*
- Point defects in solids*
What is spectroscopy?
Spectroscopy: how electromagnetic radiation (field) interacts with matter (dipole moments).
What was the Stern Gerlach experiment? Why was this important?
The Stern Gerlach experiment showed that silver (containing one unpaired electron – paramagnetic)when aimed between two magnets, electrons separated to two energy levels: either a higher energy level if the electrons didn’t align with the magnetic field, or a lower energy state if aligned. We can calculate the difference in energy between these fields. It was then assumed electrons have a 4th quantum number from this experiment: spin.
What is EPR Composed of? What are field interacting with? Where are dipole moments arising from? How is this different to NMR?
What regions of the electromagnetic spectrum?
- All spectroscopic techniques are concerned with the interaction of electromagnetic radiation with matter. Excitation between two states or energy levels is induced by absorption of radiation. The electromagnetic radiation is composed of oscillating electric and magnet*ic propagating through space with a constant speed.
- In plane polarized radiation, E1 and B1 fields are perpendicular and varu sinusoidally fomring a transverse wave with a specific wavelength. Radiation is composed of photons carrying energy and angular momentum interacting with matter.*
- only when the energy of a photon matches the energy separation between two states, resonance absorption occurs.*
Electromagnetic (EM) radiation is composed of oscillating electric (E1) and magnetic (B1)fields.
In EPR and NMR, the B1 field interacts with permanent dipole moments in the sample.
In EPR the permanent dipole moments come from the unpaired electrons.
EPR and NMR, electric (E1) and magnetic (B1) fields interact with spin (electron for EPR) or nucleus (for NMR).
EPR is microwave based, NMR is radio wave based.
What is magnetic moment? What is the equation for it?
How is this different for NMR and EPR? What is the meaning for this?
There is a large charge/mass ratio for EPR compared to NMR. Magnetic moment is at least 680 times larger for EPR compared to NMR. This means higher frequencies, shorter time scales (10 ps-1 ms), higher sensitivity and longer distance.
- EPR transitions are characterised by small energy gaps (long wavelengths) compared to other spectroscopic methods. The low-energy radiation mens it doesn’t damage the sample and is therefore non-invasive.*
- The populations of different energy levels are similar as energy gap is small. Sensitvity of both EPR and NMR is lmitred.*
- Bohr magneton (uB) is the unit expressing the magnetic moment of the electron, whereas the nucear magneton (uN) expresses magnetic dipoles of heavy particles like nucli.*
- The origin of mangetic moment comes from spin angular momentum of unpaired electron. Resonance occurs when the sample bearing upaired electrons absorbs sufficient energy to induce a spin transition from one energy to the next.*
What is EPR used for?
EPR is a very powerful method to study organic radicals in solution and solids, transition metal ions, inorganic free radicals, atomic and molecular gases and biological samples. Example spectra include:
- Molecular and supramolecular structure
- electronic structure
- dynamics
- concentration
Can therefore quantify free radical intermediates in chemical reactions, reactive oxygens species which are both important for biological and medicinal studies and can help determine antioxidant properties.
What is the EPR spectrum? What is happening to the sample and what is recorded on the graph (axes)?
What does greater intensity indicate?
Can we quanitfy both axes?
The sample is exposed to the magnetic field (B1) of the EM radiation of fixed frequency (9 GHz= microwave), and an external laboratory magnetic field (B) is swept.
The resulting spectrum is thus a plot of MW energy absorbed versus the applied magnetic field.
In CW experiments, the resonance absorption is polotted as a first derivative rather than absorption mode.
Greater intensity = more radicals
We never study the y-axis because this is sample/instrument dependent so meaningless. Intensity is the y-axis and is the amount absorbed. We just don’t quantify this. X-axis is the applied magnetic field.
What is the resonator (cavity) in EPR?
The resonator matches the frequency. 9 GHz has a wavelength of 2 cm which is the size of the resonator. NMR measures absorption, however if we derivated this (dy/dx) then we would get a graph the same shape as EPR.
The sample is placed into an EPR cavity (or resonator) such that the B1 field of the EM radiation is maximum along the sample direction while E1 field is minimum.
Looking at the figure: B1 is like a figure of 8. This field perturbs as many magnetic moments as possible. The electronic field (E1) does nothing and doesn’t help sensitivity.
Magnetic and electronic fields form a mode/ standing wave inside the resonator, which is called the TE102mode. This is the mode in which NMR and EPR are made. We want to maximise B1 and minimise E1.
What are the key dinmensions for EPR spectroscopy?
Key dimension sand what these can tell us (shown in the middle):
- Position: g-factor
- Linewidth: tumbling speed, dynamic effects, unresoled superhyperfine, hyperfine interactions
- Separation: coupling - Hyperfine - dictated by nuclear spin I
- Intensity: nucleus interactions, anisotropy of paramagnetic system
As EPR needs paramgnetic species, this is an advantage as it reduces noise!
What is the spin hamiltonian for EPR?
Free radicals have unpaired electrons.
Electrons spin on their axis forming magnetic fields. This causes either attraction or repulsion with the magnetic field.
The spin Hamiltonian describes energy of the electron spin in real paramagnetic systems.
Various interactions contribute to the Hamiltonian. The magnitude of these interactions will dictate the perturbations in the EPR spectrum.
What are some of the interactions that contribute to the spin hamiltonian?
The yellow box contains the only types we need to be concerned with:
1. Electron Zeeman interaction: occurs when we have a lab magnetic field and introduce an electron and observe the interaction. This is electron spin/ static magnetic field. We are interested in ge.
2. Hyperfine interaction: when a proton and electron interact, we get an A value.
3. Nuclear Zeeman interaction: is the interaction of a proton and lab magnet (NMR!). We are interested in the gn value.
- Zero-field splitting (ZFS): strong electron spin-electron spin interactions
- Nulclear Quadrupole - nuclear spin interaing with electric field gradients in nucleus
Discuss the Electron Zeeman Interaction (angular momentum and electron magnetic moments)
unpaired electron can exist in either +1/2 state or -1/2 state (ms)
When placed in an external magnetic field, degeneracy is lifted as ms= -1/2 state is lower in energy as it is antiparallel
The separation between the two states is proportional to the magnitude of the applied magnetic field:
Because the separation of the two states is proportional to the applied magnetic field, as frequency increases (the energy), the separation increases. The certain amount of energy required to life degeneracy matches the frequency at which this occurs: E = hv = geubB.
If the gap is too big, then the excitation energy is not enough. We have a fixed frequency being applied therefore we must find the magnetic field at which the energy gap matches so absorption is detected.
How can we work out the frequency of the electronic transition? What does 1 telsa equal?
Discuss the origin of the resonant equation and g factor:
What are the two important considerations from the basic electron Zeeman interaction shown above?
- As B increases, v must also increase. The resolution (in g) will therefore increase at higher field:v=g*uB*B/h
- As B increases, sensitivity normally increases. At thermal equilibrium, the spin populations in the two Zeeman levels is given by the Maxwell Boltzmann equation:
If the gap increases, sensitivity increases. The population difference is tiny. J band has greater sensitivity than X band.
Exam question: Why do we change the frequency of EPR? What are the advantages/disadvantages of high and low temperature and different frequencies?
(High field EPR)
As B increases, v must also increase. The resolution (in g) will therefore increase at higher field:v=g*uB*B/h
Exam question: Two radicals have similar gvalues of 2.0023 and 2.0044. Calculate the resonant field positions of the radicals at L & J band, using the resonant equation:
As B increases, v must also increase. The resolution (in g) will therefore increase at higher field:v=g*uB*B/h
What is The nuclear Zeeman Interaction (the Nuclear spin & Hyperfine Interaction)
How can we now describe the energy of the electron?
In a real system, the electron will not only interact with the applied magnetic field, but also with the magnetic moments from surrounding spin active nuclei. In this case, the energy of the electron is perturbed further. The resulting energy (E) is given by:
For g and a (=hyperfine) parameters are the most valuable pieces of information available from EPR spectra. In real systems, the radical is not isolated. Electrons interact with a big magnetic field, electrons sense magnetic field and nuclei. Nucelli also interact with the field.
The interaction of the nuclear spin with B results in a nuclear Zeeman splitting and resulting interaction between electrons and nucelar magnetic moments is described by the hyperfine interactions. These interactions give rise to additional terms in equation. This creates a small but signigicant perturbation to the electron spin energies.
Discuss the hyperdfine parameters for nuclear Zeeman Interaction:
- What occurs for simple proton couplings vs. if the unpaired electron responsible for the proton coupling is present in a pi-orbital?
Hyperfine: arises from interaction between electron and nuclear magnetic dipole moments with each toher. Create perturbation of nuclear zeeman energy levels towars higher or lower energy.
Hyperfine interaction (isotropic) - small probability electron can enter nuclear volume. Hyperfine field originating from nuclear magnetic fipole is constant in all directions. This is isotropic interaction and is a measure of interaction between electron and nuclear magnetic dipole moments as a result of finite probability that the unpaired electron will be located at the nucleus.
What are the EPR and NMR Selection rules?
The EPR selection rules are ;
Change in spin = +/- 1, Change in Ml = 0
. The NMR selection rules: ;
Change in spin = 0, change in MI = +/- 1
Electrons can change spin but not nuclei in the same process.
Sketch the energy level diagram for electron zeeman splitting showing the NMR, EPR transitions, Eelectron zeeman transitions, nuclear zeeman transitiona and hyperfine:
- Energy it of the two states realted to orientation of magnetic dipole moment in external magnetic field
- Nuclei that possess a non-zero nuclear spin quantum number will also have associated magnetic moment uI
- Nucleasr spin angular momentum is formed by coupling angular momentum of nucleons. Isotop my have different nuclear spin quantum numbers. In the absence of magnetic field they have the same energy. Magnetic fields remove degeneracy
- Energy of nuclear zeeman levels is known : E=gnunBMi
- gn can be positive (14N) or negative (15N), magnetic dipole moments of nuclei will align with or against the applied field.
What does the number of lines tell us about EPR of radicals in solution? Why do we get so many lines?
Number of lines = 2nI+1, multiplicative increase for n inequivalent nuclei
- Consider an unpaired electron that experiences a hyperfine interaction with a nucleus of spin 1. As seen in chapter 2, this system has 2n+1 energy levels for each ms. EPR spectrum of a radical that experinces a hyperfine interaction with a nucleus of I shows 2I+1 lines.*
- For commonly used microwave frequencies (X band), the energy fo the hyperfine interaction for organic radicals is much smaller than the energy of the electron zeeman interaction. This is known as the high field approximation.*
- The EPR transitions are therefore characterised by small energy gaps, and probabilities of these are similar. Hyperfine lines in EPR spectra have equal intensity.*
- ml levels are evely spaced, Distances beteween 2I+1 lines in EPR spectrum are equivalent.*
What does the intensity tell us about EPR of radicals in solution?
Intensity is given by the coefficient of binomial expansion (1 + x)i
What does the position of the lines tell us for EPR spectroscopy?
Position of lines is given by B=Bo - Sum of (aimi)
What are we expected to deduce from EPR?
- We want to know the g values
- We also want to find out the hyperfine value ‘a’. If we see hyperfine coupling, all of a values will be equal. For the graph below, we have three identical a value. The radical is on the carbon.
- In all exam examples, presume frequency =9.5 GHz = 9.5x109Hz; X BAND
- WHATEVER YOU MEASURE ON ONE SIDE, DO IT FOR THE OTHER TO MAKE SURE
- The first difference is the smallest hyperfine coupling constant!
- All g values will be between 1.95-2.22 and they are dimensionless
Exam question: How can we measure the hyperfine coupling of the following EPR spectra?
Discuss how different EPR spectra come about?
Exam question:
- Find the hyperfine interaction
- The spin pattern
- B
- g
aHa and aHband Pca, Pcb
Discuss the difference between the two liquid phase EPR spectra:
What are the general rules for interpreting liquid phase EPR spectra?
How does solid state NMR come about? Is this better data?
At room temperature for NMR? compounds are tumbling so we get average spectra. We can freeze these down and get solid state. This quenches tumbling and we now have a solid system. This gives more complicated but much more informative spectra.
What is the g factor in terms of theory and analysis of EPR spectra in the solid state?
What does g aniosotropy mean in terms of EPR spectra in the solid state?
The shape of the EPR spectrum in solid state depends on relative orientation of B with respect to the orientation of paramagnetic species. The local symmetry around the site is crucial.
The basics of EPR resonance equation must consider sample orientation
This is a schematic illustration of the three independent axes systems relevant to the EPR analysis, including the magnetic field axes (X’,Y’,Z’), principal g axes (X,Y,Z). In solid state systems we usually only consider the orientation of the external applied magnetic field B with respect to the principal orthogonal gtensor axes (x,y,z), using right handed cartesian coordinates with polar angles theta and thi.
Energy depends on closeness of dipole moments of electrons and the dipole
Energy is also affected by orientation!
When hv=guBBwe are assuming g is isotopicin liquid phase. However isotopic independencies are averages!
If energy changes, then g changes
Always see field rotating, we visualise it this way, but actually it is the other way around
How does g depend on sample orientation for EPR in the solid state?
Discuss the single crystal case for solid state EPR spectra:
Discuss how poweder spectra differ for solid state EPR spectra:
Most commonly, EPR are recorded in frozen solutionsor as polycrystalline powders. We need to study under operating conditions (i.e. in vitroconditions for enzymes etc)
In this case, the powder spectrum is dominated by all contributions from the g anisotropy
Again, for S= ½ , I=0, in uniaxial site, the variation in g depends only on theta and B
Remember that the values of gIIand g^set the range of Bover which absorption occurs
When gII> g^no absorption occurs at fields lower than:
Discuss how different shapes of complexes can be identified using powder EPR spectra:
Discuss these examples of powder sepctra:
What is hyperfine A anisotropy?
How can the energy be calculated? (Edip)
The hyperfine interaction occurs when the unpaired electron interacts with the magnetic moment of a nearby nucleus of spin I > ½. The isotropic a value is now replaced with an isotropic A value. A also has orientational dependency.
In liquid phase = a, but in solid phase = A
The A value has two contributions: the isotropic Fermi contact term (a) and the anisotropic dipolar term (T).
The energy of this anisotropic dipole-dipole interaction (Edip) term can be approximated to
For the hyperfine A anisotropy, what is the magnitude of Edip depending on?