Cytogenetic Tests Flashcards
Cytogenetics
genetics concerned with how the choromosomes relate to cell behaviour, particularly mitosis and meiosis
Cell/tissue used for constitutional cytogenetics
postnatal - blood, not active, mitogen PHA, T cells
prenatal - amniotic fluid, inactive, medium and substrate
- chorionic villus, actively dividing cells from the
placenta
Cell/tissue used for malignancy cytogenetics
leukaemia: bone marrow, blood if leukaemia cells
present
lymphoma: lymph node biopsy, bone marrow
other tumours: tumour biopsy, bone marrow
Shapes of chromosomes in metaphase
- metacentric
- submetacentric
- acrocentric
Metacentric
centromere in middle
large/small
each half of the metaphase chromosome is a chromatic
Submetacentric
centromere towards one end short arms (p) upper long arms (q) below
Acrocentric
centromere very close to one end
may have satellites separated from the small short arms by a secondary constriction/satellite stalk
What is each arm of a chromosome divided into?
subdivided into G-bands numbered from the centromere outwards
Fluorescence in situ hybridisation
segment on single-stranded DNA labelled with fluorescent tag
hybridised to target DNA attached to a slide
hybridises with matching DNA sequence
detect chromosome abnormalities
Difference between X and Y chromosome
X: larger, 195 known gene loci
Y: 50mb, around 13 known loci
Dosage disequilibrium
females have 2 copies on X chromosomes, male only 1 copy of genes
X inactivation re-balances by ‘switching off’ 1 copy
Types of chromosome abnormality
- numerical: trisomy, polyploidy
- uniparental origin: uniparental disomy
- structural: translocation, deletion, duplication, marker
Down Syndrome cause
- trisomy 21: majority due to non-disjunction at maternal meiotic 1st division
- unbalanced robertsonian translocation: inherited from balanced robertsonian carrier parent
- mosaic: post-zygotic, mitotic non-disjunction event
Features of DS
flat facial profile, flat back of head, protruding tongue mild-moderate mental retardation autism cardiac defects increased risk of leukaemia
Edwards syndrome cause
trisomy 18