Contamination Flashcards

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1
Q

Define contamination?

A
  • to make something impure by exposure of or an addition of a polluting substance
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2
Q

How does the new DNA17 multiplex make contamination easier?

A
  • it is very sensitive so capable of detecting even smaller amounts of DNA
  • improved sensitivity = contaminated DNA is more likely to be detected
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3
Q

What is difference between contamination and adventitious transfer?

A
  • contamination - applied to forensic process as transfer of foreign DNA to sample AFTER crime has been discovered (scene attendance through to sample collection/testing)
  • adventitious transfer - transfer from innocent activity before crime event
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4
Q

What is the issue with undetected contamination?

A
  • complicates interpretation
  • increases risk that result could is incorrectly attributed
  • increases risk that result is given undue significance
  • could diminish the value and reliability of the forensic evidence
  • could change single source sample into a mixture
  • could give a false positive result
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5
Q

What are the two constituents that contamination could manifest as?

A
  • major and minor
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6
Q

What are the two types of contamination that it could be?

A
  • one off - affecting single tube in batch of samples
  • blanket/gross event - affecting whole batch of samples
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7
Q

What are the 3 criteria that need to be fulfilled for contamination?

A
  • needs to be:
  • source of DNA available to be involved in transfer event
  • opportunity for DNA transfer to occur
  • mechanism by which DNA transfer is achieved
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8
Q

What are the first potential sources of contamination?

A
  • individuals involved in different roles of forensic process:
  • police
  • scenes of crime officers
  • pathologists
  • forensic scientists
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9
Q

What are the second potential source of contamination?

How can this be understood and therefore avoided?

A
  • consumables or reagents used in forensic process, packaging and environment in which test is carried out (including other forensic samples processed in lab environment)
  • important to understand where our consumables are produced and the quality standards which are associated with their manufacture
  • essential to have quality managed lab process with appropriately trained staff
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10
Q

What are three contamination opportunities?

A

1 - from person to stain
2 - from consumable to stain
3 - from stain to stain

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11
Q

What can be said about the mechanisms of transfer?

What are the three mechanisms for transfer?

A
  • the mechanisms for transfer are provided by the opportunities and can be straightforward or more complicated

1 - direct primary contact
2 - secondary transfer
3 - tertiary

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12
Q

What is an example of person to stain contamination?

A
  • poor use of PPE (facemasks and hairnet) which should provide a barrier between operator and sample
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13
Q

What is an example of reagent to stain contamination?

A
  • direct transfer from DNA already present in a tube which is not sufficiently free of DNA for forensic purposes
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14
Q

What can issues with lab processes cause?

A
  • DNA transfer and contamination is facilitated inappropriately by cross-contamination between samples
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15
Q

How could we prevent contamination transfer?

A
  • training of staff to a recognised standard (knowledge of what could happen and where to look for it)
    of
  • procurement of consumables from a source supported by quality standards
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16
Q

What are detection methods for contamination?

A
  • elimination databases for lab staff
  • appropriate quality checks within forensic process
17
Q

At what processes can contamination occur?

A
  • collection
  • extraction
  • amplification
  • injection
18
Q

What type of DNA increases the risk of contamination?

A
  • degraded or low template DNA
19
Q

What is allele drop-in

A
  • a type of profile contamination where 1 or 2 alleles are present in DNA profile that are not inherent to DNA extract
  • not reproducible on reamplification
20
Q

How could allele drop-ins occur?

A
  • dust particles from lab environment
  • plastic ware used within DNA process
21
Q

What causes differences in peak heights of repeated application of the same input to DNA?

A
  • stochastic effects
22
Q

What is touch DNA?

A
  • trace DNA
  • DNA analysis at crime scene only requires 7-8 human skin cells (these can be transferred from just touching objects
23
Q

Why has touch DNA been criticised?

A
  • criticised for false positives due to contamination
  • in 2008, parents of murdered child (Jon Ramsey) were cleared after unknown male’s DNA was found in her underwear
  • but this sample was so small that this DNA could have been from person who packaged underwear in factory
24
Q

Gareth Williams case

A
  • person to sample contamination
  • SOCO to exhibit
  • subsequent testing produced a DNA profile which caused misleading investigation and wasted resource
25
Q

Phantom of Heilbronn

A
  • Michelle Kieswetter
  • consumable to sample contamination
  • from 1993 to 2009 detectives matched DNA of serial killer in over 40 crimes in many countries
  • in 2007 police officer Michelle was murdered in Germany and DNA matched to unknown serial killer
  • cotton swabs used to collect DNA were not certified for human DNA collection and sterile (they were all from same factory)
  • workers DNA on cotton swab before police received them and used them
26
Q

Manchester Rape

A
  • sample to sample contamination
  • failure in lab practise which involved reusing sampling equipment resulted in DNA profiles being given inappropriate relevance in context of case