Clinical Biochemistry Flashcards
define accuracy
closeness to the true value
define precision
reproducibility of agreement with each other for multiple trials
define true value
standard or reference of a known or theoretical value
what results show in a blood sample that has been haemolysed?
collected too vigorously
red cells have been broken down
artificially high level of potassium
describe how a false negative occurs
there is a proportion of the diseased population, where for the result of the test, fall into the reference range
define sensitivity
true positive / true positive + false negative
define specificity
true negative / true negative + false positive
what factors affect reference ranges and results?
age gender diet pregnancy sample handling sample type time of day/month/year weight fasting posture sample collection procedure
where is calcium distributed in the body?
99% in bone
1% in plasma
of that, 50-60% is bound to plasma proteins
remainder is ionised (active, required for nerve conduction and muscle contraction)
what affects plasma calcium concentration?
alteration in protein levels
vitamin D
parathyroid hormone
renal function
prolonged tourniquet application (increases protein levels)
reduced/increased by 0.02mmol for each g albumin falls below/above 40
what is the role of parathyroid hormone?
released when Ca levels fall
increases renal reabsorption of Ca and excretion of PO4
stimulates osteoclasts, increases bone reabsorption and increases Ca released from bone
increases vitamin D synthesis
describe vitamin D metabolism
UV light converts cholesterol to vitamin D3
hydroxylated at 25 site in the liver
converted from vitamin D to 1,25 vitamin D (active form) in the kidneys
what are the causes of hypercalcaemia?
PTH excess vitamin D excess (ingestion, sarcoid) increased Ca intake (milk-alkali syndrome in PUD) thiazide diuretics bony metastases in malignancy PTH-secreting tumours haematological malignancy thyrotoxicosis addison's disease familial hypocalcuric hypercalcaemia
what are the signs and symptoms of hypercalcaemia?
malaise depression polydipsia polyuria abdominal pain (renal stones) features of underlying disease (malignancy, sarcoid) low PO4 and high Ca (excess PTH) high PO4 and Ca (excess vitamin D) high ALP (bone disease, haematological malignancy) renal function CXR (sarcoid) plasma protein electrophoresis (myeloma) urinary calcium
what is the management of hypercalcaemia?
rehydration (orally, normal saline 4-6L over 24hrs)
monitor urine output
loop diuretic (furosemide)
monitor K levels if lots of excretion
bisphosphonates (bind Ca to prevent if being released from bone)
hydrocortisone (in myeloma or sarcoid)
what are the causes of hypocalcaemia?
not corrected for albumin renal failure (increased PO4 and vitamin D may not be converted to the active form) hypoparathyroidism vitamin D deficiency hypomagnesaemia bisphosphonates
what are the symptoms and signs of hypocalcaemia?
neuromuscular irritability
tetany
positive Chvostek’s sign (tap on facial nerve and spasm of facial muscle)
positive Trousseau’s sign (inflation of BP cuff causes wrist flexion and finger extension)
QT prolongation
what is the management of hypocalcaemia?
oral calcium
milk
vitamin D
IV calcium gluconate (severe cases)
describe the storage and uses of PO4
85% stored in bone within cells
required for ATP
important constituent of cell membranes and nucleic acid
what are the causes of hypophosphataemia?
poor diet, reduced intake reduced absorption (malnutrition, vitamin D deficiency) increased shift into cells (respiratory alkalosis, insulin, glucose, amino acids) increased urinary excretion (excessive PTH, renal tubular defects)
what are the clinical features of hypophosphataemia?
refeeding syndrome, post IV, enteral or normal feeding alcohol abuse asymptomatic rhabdomyolysis cardiomyopathy renal failure impaired RBC function impaired white cell function (susceptible to infection) reduced phagocytosis
what is the treatment of hypophosphataemia?
milk
oral supplements
IV dipotassium hydrogen phosphate over 12hr and once in 24hr (too much causes calcium deposits in tissues)
what are the causes of hyperphosphataemia?
renal failure
cellular phosphate leak
cell breakdown (rhabdomyolysis or tumour lysis)
describe the storage of magnesium
67% in bone
31% intracellular
what are the causes of hypomagnesaemia?
poor intake
malabsorption
increased losses (renal or GI)
diarrhoea or fistula (losses of gut fluid)
refeeding syndrome
alcohol abuse/withdrawal
increase in amount of fluid lost in the loop of henle
what are the symptoms and signs of hypomagnesaemia?
similar to hypocalcaemia
tetany
Chovstek’s sign
neuromuscular problems
what is the treatment of hypomagnesaemia?
oral or IV magnesium
30mmol in first 24hrs then 20mmol in each 24hr period after that (IV)
where is ALP found?
liver
bone
intestines
placenta
what are the causes of high ALP?
bone growth
pregnancy (placenta)
bone fracture healing
bony metastases
Paget’s disease (excessive bone growth and abnormal bone remodelling)
hyperparathyroidism (osteoclasts stimulated to release Ca)
obstructive jaundice
describe osteoporosis
Ca, PO4 and ALP normal
asymptomatic
usually found in a DEXA scan if there are no fractures
describe osteomalacia
defective bone mineralisation (similar to rickets)
low Ca and PO4 and high ALP
usually due to low vitamin D
describe Paget’s disease
abnormal bone remodelling due to increased ALP
normal Ca and PO4
usually elderly
describe bony metastases
high Ca and ALP, normal or high PO4
describe myeloma
Ca alone high
ALP usually normal
describe primary hyperparathyroidism
adenoma on parathyroid gland causing excess PTH high Ca (hypercalcaemia), ALP and low/normal PO4
define tumour markers
molecules which indicate the presence of a cancer or provide information of the likely future behaviour of a cancer
what are the use of tumour markers?
detect cancer in asymptomatic patients
differentiate between malignant and benign tumours
post-surgery to detect the amount that was removed
detect recurrence
predict how a tumour responds/has responded to treatment
what are the categories for the ideal tumour marker?
high PPV and NPV highly sensitive and specific inexpensive simple circulating level correlates with amount of tumour acceptable to subjects
describe some non-specific markers involved in detecting malignancy
hyponatraemia - indicates SIADH secondary to NSCLC
LDH - haematological malignancy
ALP - bony metastases, bone malignancy
total protein - multiple myeloma, Waldenstrom’s macroglobulinaemia
ferritin - renal cell carcinoma, leukaemia, hepatocellular carcinoma
define oncofetal antigens
present in cells in early development
reactivated in more undifferentiated cancer cells
describe 2 types of oncofetal antigens and what they look for
AFP - hepatocellular carcinoma, ovarian and testicular tumours
carcinoembryonic antigen - colorectal carcinoma
describe some hormones that are used as tumour markers
HCG - choriocarcinoma, testicular tumours, trophoblastic tumours
metanephrines - pheochromocytoma
calcitonin - medullary carcinoma of thyroid
IGF1 - pituitary malignancy
describe some glycoproteins that are used as tumour markers
CA19-9 - pancreatic tumours
CA125 - ovarian, breast, pancreatic and lung tumours
can be increased in benign conditions
describe some enzymes that are used as tumour markers
PSA - prostate cancer, other prostatic conditions
neurone-specific enolase - SCLC, neuroendocrine tumours
describe some cell components/antigens used as tumour markers
SCC antigen - gynae, head and neck and lung tumours
immunoglobulins - multiple myeloma
CEA - breast, pancreatic, ovarian, lung, stomach, colon and prostate cancer
what markers are produced by a multiple myeloma?
heavy and light immunoglobulin chains (detected as a paraprotein band)
Bence Jones protein (urine)
free light chains
beta-2 microglobulin (measures mass of tumour present)
what markers are produced by ovarian cancer?
CA125 inhibin HCG AFP carcinoembryonic antigen
what markers are produced by carcinoid tumours?
serotonin
S-hydroxytryptamine
catecholamines
chromogranin A
what are the causes of PSA increase?
prostate tumour BPH needle biopsy prostatitis urinary retention
rises occur rapidly and can take several days to return to normal
with what symptoms should CA125 be measured for ovarian cancer?
abdominal distension loss of appetite abdominal pain new onset irritable bowel syndrome >50
measured along with a pelvic US
what are the causes of CA125 increase?
ovarian, pancreatic, lung, breast, uterus, cervix and GI tract tumours
pancreatitis
peritonitis
hyperthyroidism
PID
ascites, HF, pleural effusion (fluid accumulation)
what patients should have an AFP test?
those known to have hep B and C-related cirrhosis
what are HCG and AFP used to detect?
non-seminoma type testicular germ cell tumours
follow-up to detect recurrence
what are HCG and LDH used to detect?
pure seminoma tumours
what are the causes of an AFP increase?
hepatocellular carcinoma ovarian tumour testicular tumour cirrhosis hepatitis ataxia telangiectasis pregnancy
what are the causes of a HCG increase?
pregnancy marijuana use choriocarcinoma trophoblastic tumour testicular tumour
what affects the reference range of CEA?
smoking other tumours IBD pancreatitis liver disease
what are the causes of CA19-9 increase?
pancreatic, colorectal, lung, liver and ovarian cancers
pneumonia
hepatobiliary disease
renal failure
name some examples of lipids
fats steroids fatty acids fat soluble vitamins (K, E and A) phospholipids
what are the functions of lipids?
maintain the structure of cell membranes
store energy
hormone synthesis
signalling
what are the functions of cholesterol?
hormone production (cortisol and sex hormone synthesis)
main component of cell membranes
vitamin D synthesis
bile acid synthesis (role in digestion)
what is the function of triglycerides?
efficiency way of storing and transferring energy
describe lipoproteins
required for lipid transportation in the circulation
contain apolipoproteins - made in the liver, bind to receptors, allow transportation
what is the function of chylomicrons?
transport triglycerides (mainly dietary)
what is the function of VLDL?
transport triglycerides from the liver to other tissues
what are the functions of apolipoproteins?
allow the transfer of different cholesterol fractions between different lipoprotein particles
co-factors for some of the enzymes used in cholesterol metabolism
bind to receptors in the cells
allow lipids to be taken up into cells
what are the pathways of lipid transport?
dietary
hepatic
tissue to liver (reverse cholesterol)
describe dietary lipid transport
mainly via chylomicrons
can go directly to cells if required (muscle, fat)
can go to liver to be processed and stored
describe hepatic lipid transport
the liver exports some of these stored triglycerides and moves them to the various tissues as required
the fraction that remain are transported back to the liver for further processing