Chromosome Abnormalities/Mutations/Analysis Flashcards

1
Q

Give the three main types of chromosome abnormalities

A

Numerical
Structural
Mutational

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2
Q

Give types of numerical chromosome abnormalities

A

Non-disjunction
Autosomal aneuploidy
Sex linked aneuploidy

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3
Q

Describe the mechanism of non-disjunction

A

Problem in meiosis to give a disomy (two copies of a chromosome in a daughter cell/gamete)

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4
Q

What does non-disjunction give rise to in offspring?

A

Trisomy (an extra chromosome in a cell)

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5
Q

What is caused by trisomy in chromosome 21?

A

Down syndrome

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6
Q

Trisomy in chromosome 13?

A

Patau syndrome

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7
Q

Chromosome 18?

A

Edwards syndrome

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8
Q

Chromosome 45,X?

A

Turner syndrome

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9
Q

Chromosome 47,XXY?

A

Klinefelter syndrome

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10
Q

Give some features of Patau syndrome

A
  • dysmorphic features

- mental retardation

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11
Q

Features of Edwards syndrome?

A
  • developmental problems
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12
Q

Features of Turner syndrome?

A
  • female
  • short stature
  • neck webbing
  • widely spaced nipples
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13
Q

Features of Klinefelter syndrome?

A
  • male
  • infertile
  • small testes
  • tall
  • long limbs
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14
Q

Give types of structural chromosome abnormalities

A

Balanced/unbalanced reciprocal translocation

Robertsonian translocation

Inversion

Deletion

Insertion

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15
Q

What is reciprocal translocation?

A

Chromosome breaks in two and forms two new derivatives

Balanced - same amount of each at the end; phenotypically normal

Unbalanced - from normal parent and another with balanced translocation; gives rise to trisomy/monosomy in offspring

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16
Q

What is Robertsonian translocation?

A

Occurs in acrocentric chromosomes;

  • long arms (q) attach to long arms
  • short arms (p) attach to short arms

Gives rise to abnormalities in offspring if they receive unequal amounts of a chromosome

17
Q

Give two types of inversion

A

Paracentric inversion - abnormal fixing, no centromere involvement

Pericentric inversion - abnormal fixing in the centromere region

18
Q

Give the four types of mutational coding abnormalities

A

Silent
Missense
Nonsense
Frame shift

19
Q

What is the difference between transitions and transversions?

A

Transitions - purine mutates to purine, pyrimidine mutates to pyrimidine

Transversions - purine mutates to pyrimidine, pyrimidine mutates to purine

20
Q

Give types of mutational chromosome abnormalities

A

Germline/somatic
Gene disruption
Polymorphism

*All may be coding/non-coding/point mutations

21
Q

Give the main types of abnormality detection

A

PCR
ARMS
RFLP
DNA sequencing

22
Q

What is PCR?

A

Polymerase chain reaction

23
Q

What happens during PCR?

A
  • denaturation to create a single-stranded DNA
  • annealing (bonding of primers to DNA template
  • extension of primers using DNA polymerase to synthesise new DNA strands behind them
  • repetition to amplify target DNA
  • analysis using gel electrophoresis
24
Q

What is ARMS?

A

Amplification refractory mutation system

25
Q

What happens during ARMS?

A
  • sequence specific primers will only amplify if the target allele is present
  • wild type allele amplified by a normal primer
  • mutant allele amplified by a mutant amplification
  • then undergoes PCR and gel electrophoresis
26
Q

What is RFLP?

A

Restriction fragment length polymorphism

27
Q

What happens during RFLP?

A
  • restriction enzyme cuts DNA strand at different lengths

- gel electrophoresis

28
Q

What is DNA sequencing?

A

the process of determining the precise order of nucleotides within a DNA molecule

29
Q

How does DNA sequencing work?

A
  • double helix denatured
  • one strand isolated
  • radioactively labelled primer used to replicate strand
  • primer elongates to match strand and reform a double strand (stops at ddNTP)
  • gel electrophoresis (coloured dye shows up)