Chemistry of Life Flashcards

1
Q

Element

A

A substance that cannot be broken down by chemical reactions. Atoms are their smallest units that retain its properties.

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2
Q

Trace elements

A

Required by an organism in only minute quantities (iron, iodine).

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3
Q

Isotopes

A

Forms of an element with differing numbers of neutrons

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4
Q

Electronegativity

A

Tendency to attract electrons

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5
Q

Covalent bonds

A
  1. Valence electrons are shared between atoms
  2. Most common bond in bio
    3.
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6
Q

Nonpolar covalent

A

Electrons are shared equally

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7
Q

Polar covalent

A

Electrons are shared unequally due to unequal negativities. Causes areas of partial positive and partial negative charges.

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8
Q

Hydrogen bonds

A
  1. Bond bases in nucleic acids and form between water molecules
  2. Weak bonds that form between hydrogen (partial positive) and oxygen or nitrogen (strongly electronegative)
  3. Water can form 4 hydrogen bonds at a time
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9
Q

Properties of water

A
  1. Cohesion- creates surface tension and allows molecules to cling together
  2. High specific heat- large amount of heat to boil
  3. Less dense as a solid, allows ice to float
  4. Important solvent for polar substances
  5. All are due to hydrogen bonds
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10
Q

Cohesion

A
  1. Allows for adhesion and transpiration. Occurs in thin vessels (capillary action).
  2. Adhesion- water molecules stick to other substances
  3. Transpiration- water moves up xylem and evaporates from leaves- molecules cling to each other by cohesion and to plant vessel walls by adhesion.
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11
Q

High specific heat

A

Takes a lot of heat to heat up water, so it can remain in our bodies without boiling. Keeps temperature of oceans stable.

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12
Q

Expansion on freezing

A

Makes ice less dense, letting it float and protecting organisms that live in water.

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13
Q

Acids

A

Excess of hydrogen ions, have a pH below 7

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14
Q

Bases

A

Excess of hydroxide ions (OH), have a pH above 7

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15
Q

Buffers

A

Minimize changes in pH by accepting or donating hydrogen ions depending on the change. Carbonic acid is a buffer to control pH in the human body and in oceans.

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16
Q

pH

A

Scale is logarithmic- measures hydrogen ions by a factor of 10. pH of 3 is ten times more acidic than 4.

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17
Q

Polymers

A

Chain of building blocks, individual are called monomers

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18
Q

Organic compounds

A

All contain carbon, and most contain hydrogen and oxygen, connected by covalent bonds.

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19
Q

Properties of carbon

A

Can form up to 4 covalent bonds, can form chains, ring shaped molecules, or branches.

20
Q

Isomers

A

Same molecular formula but differ in the arrangement of atoms, which creates different properties. Examples are glucose and fructose, which both have the same formula.

21
Q

Functional groups

A
Create diverse properties. 
Alcohol (OH)
Organic acid (COOH)
Amino (NH2)
Phosphate (PO3)
22
Q

Carbohydrates

A
  1. Contain Carbon, Hydrogen, and Oxygen in a 1:2:1 ratio
  2. Soluble in water
  3. Classified as mono, di, or polysaccharides
23
Q

Monosaccharides

A
  1. Simple sugars/monomers that are used as energy for cells (glucose, fructose).
  2. Depicted as straight or as rings (C6H12O6)
24
Q

Disaccharides

A
  1. Form through dehydration synthesis

2. Uses 2 sugar molecules. 2 glucose molecules form maltose

25
Polysaccharides
1. Repeated units of monosaccharides 2. Energy storage. Glycogen for animals, starch for plants 3. Structural support. Cellulose for plant cell walls, chitin for insect exoskeletons
26
Dehydration Synthesis
Bonds form by removing a water molecule
27
Hydrolysis
Water is added to break bonds.
28
Lipids
1. Contain Carbon, Hydrogen, and Oxygen, but not in a 1:2:1 ratio. 2. Most are insoluble in water and repel it 3. Also can contain other elements of phosphorus, nitrogen, and sulfur 4. Types: fats/triglycerides, steroids, phospholipids 5. Monomers- glycerol and fatty acids
29
Functions of lipids
1. Energy storage- store more calories than carbs | 2. Protection and insulation of vital organs
30
Saturated
Single bonds, these types of fats are unhealthy. Solid at room temp
31
Triglycerides
1. Classified as saturated or unsaturated | 2. Glycerol with 3 fatty acids (long chain of carbons covered in hydrogen) attached to it
32
Phospholipids
1. Diglyceride (tail) with negatively charged phosphate (head). Head is polar and hydrophilic 2. Make up cell membranes
33
Steroids
1. Large lipids formed by 4 connected rings of Carbon | 2. Form of some hormones, like testosterone or estrogen, and cholesterol
34
Proteins
1. Polymers of amino acids 2. Shape is determined by its amino acid content, and its shape (conformation) determines function 3. Has 4 levels of structure
35
Amino acids
1. Has amino group (NH2), carboxyl group (COOH), R group, and hydrogen atom 2. R group creates the differences between amino acids
36
Peptide bond
1. Bonds amino acids. A chain of amino acids is a polypeptide. Polypeptides fold in on each other to create a protein. 2. Form through dehydration synthesis between amino and carboxyl groups
37
How is a protein denatured?
1. Through heat, change in pH, or other disturbance | 2. Changes its shape, and therefore it loses its ability to function.
38
Primary structure of proteins
Genetically determined amino acid sequence, and is determined by the number, kind, and order of amino acids
39
Secondary Structure
1. 2 3D shapes formed by hydrogen bonding between polypeptide backbone 2. Alpha is a coiled shape, beta is a pleated sheet 3. Amino acids close to each other are interacting
40
Tertiary Structure
1. Reactions between R groups, amino acids that were far away can now interact 2. Develops a complex shape
41
Quaternary Structure
1. Not every protein gets to this stage 2. Polypeptide chains interact 3. Hemoglobin is an example of this
42
Chaperone proteins
Help proteins to fold
43
Nucleic Acids
1. Monomers are nucleotides 2. Found in nucleus for DNA and cytoplasm for RNA of cells. 3. Contain C, H, O, N, P 4. Have directionality by 3 and 5 carbons of the sugar
44
Nucleotides
Composed of nitrogenous base (C, T, G, A, or U), sugar (ribose or deoxyribose) and a phosphate group.
45
RNA
Single stranded
46
DNA
Double stranded, molecule of heredity