Chapter 7 Flashcards

1
Q

What is fNIRS?

A
  • Functional near-infrared spectroscopy
  • Cortical tissue transmits light which allows for the imaging of oxygen consumption in the brain
  • Oxygen consumption as a marker of neuronal activity in specific cortical regions
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2
Q

What is Broca’s region responsible for?

A

Speech production.

-Located in the left frontal lobe

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3
Q

What is a histological tool for studying neuroanatomy?

A

Brains were sectioned after death, and the tissue was stained with various dyes–> identify cell bodies viewed with a light microscope

  • Light microscopes allowed for the division of the cerebral cortex into distinct zones based on neuron characteristics in those zones
  • Modern microscopes image a fluorescent signal that is displayed by a neuron’s calcium levels when they are being fired in mice as they navigate their environment
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4
Q

What is the brainbow technique?

A

Technique discovered by Jean Livet involving labelling neurons by highlighting them with specific colours
(Think “Live the rainbrow”)
-Offers a way to describe where each neuron sends its signals & how it’s connected to other neurons
-Identify brain cells implicated in diseases

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5
Q

What is the dentate gyrus & what role does it play?

A

A subregion of the hippocampus which helps mammals remember the context in which they encounter information
-Deficits in these regions lead to memory deficits
-Without the hormone corticosterone, neurons in the dentate gyrus die
(Think “The dentist is a different context unless you’re courteous & masculine”)

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6
Q

Describe the study comparing memory formation of healthy rats vs ADX rats with their adrenal glands removed:

A

3 groups: healthy rats, ADX rats with no treatment, ADX rats with treatments that increase neuron generation in the dentate gyrus (better housing & longer running on wheels)

  • Each rat was placed in context A or B for 10 mins on 2 days with each context containing ONE type of object
  • 2nd condition was the same but this time with 2 diff objects (1 from that context & another from the other context)
  • When healthy rats encounter an object in the wrong context, they spend 3/4 of their time investigating & treating the familiar object as new
  • Non-treated ADX rats treated mismatched cases & other objects the same. Only spend half the time on each object
  • Treated rats perform like healthy rats due to regeneration of dentate granule cells & were unimpaired in the object-context mismatch
  • Therefore dentate gyrus is necessary for contextual learning
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7
Q

What is behavioural neuroscience?

A
  • Study to understand brain-behaviour relationships
  • A major challenge is to develop methods to study both typical & atypical behaviour
  • Must develop ways to enable lab animals to reveal their symptoms
  • Ethology (animal behavioural studies)–> basis for modern behavioural neuroscience
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8
Q

What is the Corsi Block-tapping test?

A

Participants observe experimented tapping sequence of blocks & must repeat the sequence correctly

  • (Block span)–>Measures ST recall of spatial positions
  • Increase task difficulty by finding out what their max block span is, then adding one more block (Span + 1)
  • (Span + 1)–> measures learning & LT memory storage of info
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9
Q

What is the mirror-drawing task?

A

Person traces pathway (e.g star) by looking at mirror as your movement appears backward

  • Increased accuracy with practice & show good recall after a few days
  • People with memory deficits don’t recall learning this task, but still, perform it perfectly
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10
Q

What is the recency memory task?

A

Person is shown a long series of cards with 2 stimulus items (words or pictures)

  • On cards with a question mark between them, they have to say if they’ve seen it before & which item they saw most recently
  • May not be able to recall which item was seen most recently
  • Or may not be able to correctly identify items as familiar
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11
Q

What is the navigation task devised by Richard Morris for analysis of rodent behaviour?

A

Place-learning task–>
-Placed in the pool at different starting locations & must find a platform
They can only do this by considering the configuration of visual cues in the room (e.g decorations, windows)

  • Matching-to-place task–>
  • The platform is placed at a different location on each test day.
  • The rat must learn that the platform is placed on the same spot where it is originally found on that day, throughout the entire day.
  • Landmark-learning task–>
  • Must ignore room cues & focus on the only cue on the pool wall to find the platform
  • Platform & cue move on each trial
  • The rat must learn that distant cues outside the pool are irrelevant & only local cue is relevant

(Think “Morris the mouse at the pool”)

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12
Q

What is another behavioural study in rats to study role of movement in stroke?

A
  • The rat must reach through a slot to get sweet food
  • Taught to put their hands into the slot, rotate them horizontally to grasp, and rotate them vertically & then withdraw hands to get food
  • Researchers observe digit dexterity during the video playbacks
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13
Q

What is the principal technique in animal studies when dealing with the brain?

A
  • Inactivate the brain via lesions or with drugs
  • Activate it with electrical stimulation, drugs or light
  • Then measure brain function & performance
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14
Q

Describe Karl Lashley’s method of ablation

A

-Ablation is removing or destroying tissue
-Trained monkeys & rats on mazes & motor tasks–> removed bits of the cerebral cortex–> produce amnesia for specific memories
-The experiment failed because memory is distributed throughout the brain & not located in a single place
-Memory loss was related to the amount of tissue removed
(Think “Lash person is not able”)

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15
Q

What is a stereotaxic apparatus?

A

A device that permits the researcher to target a specific part of the brain for destruction

  • Head is held in a fixed position
  • 3D brain map created based on precise positioning of all brain regions relative to each other
  • Dorsal-ventral (top-bottom) measurement is the y-axis made relative to the brain surface
  • Medial-lateral measurement is the x-axis relative to midline junction of cranial bones

(“Think stereo audio surrounds your brain, taxes must be paid at a precise time, otherwise you’re financially destroyed”)

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16
Q

What is the most widely used surgical technique today for the treatment of Parkinson?

A

-Drill a hole in the skull & use stereotaxic coordinates to target globus pallidus

(Think “Parking globe”)

-Current passes through the globus pallidus through an electrode to destroy structure & relieve the patient of tremor

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17
Q

What is high-intensity focused ultrasound’s role in treating Parkinson’s?

A
  • Achieve same result of hole drilling but without surgery
  • Focused ultrasound points individual beams at the same spot in the brain
  • The beam passes through tissue & tissue gets heated at convergent point of beams
  • Heating that area makes it stop working properly–> surgeons will know they got the right target
  • Heating continues until target is destroyed & tremor is eliminated
  • The patient will start modifying behaviour to compensate for lesion & to prevent this, surgeons make reversible lesion techniques like regional cooling to prevent synaptic transmission
  • In regional cooling, a chilled fluid is passed through a hollow metal coil that is placed next to the neural structure to keep it at 18 C
  • Synaptic transmission is restored once the chilled fluid is removed from the coil
  • If regional cooling is not an option, they’ll administer GABA agonists to prevent brain structure from communicating with other structures through local inhibition
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18
Q

Describe Penfield’s use of electrical stimulation during neurosurgery:

A

-Used electrical stimulation on cerebral cortex during surgery with the objective to enhance/block neuronal activity & observe behavioural effects.

(Think “Pen in a field that is cerebral cortex, pen being electrode”)

  • Later studies did the same thing with stereotaxic instruments to place the electrode in specific brain locations
  • Rats will engage in electrical self-stimulation by pressing a bar to turn on current shooting through their lateral hypothalamus in order to eat
  • This current affects the neural circuit involved in eating & pleasure
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19
Q

How is brain stimulation used in therapy?

A
  • Intact cortex adjacent to injured cortex after stroke is electrically simulated–> improvement in motor behaviours
  • Deep brain stimulation (DBS)–> facilitate behaviour through the administration of continuous low-voltage electrical currents to a targetted area via electrodes implanted into the brain.
  • DBS to globus pallidus in basal ganglia makes movements smoother for Parkinson patients
  • DBS used to treat OCD, Schizo, Depression, epilepsy & TBI
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20
Q

What is the non-invasive alternative to DBS?

A

Transcranial Magnetic Stimulation (TMS)

  • Wire coil placed against the skull with current pulsing through it & producing increase/decrease in a magnetic field which passes through the skull & causes the firing & depolarization of neurons–> leads to evocation or disruption of behaviour
  • Effects are brief & don’t outlive stimulation but repeated or continuous stimulation (rTMS) has more lasting effects (temporary tissue inactivation or functional changes)
21
Q

What role does drug manipulation play in studying brain activity?

A

Drugs pass into the bloodstream & enter the brain or go through an indwelling cannula–> allows direct application of drugs to certain brain structures—> influence neuronal activity

  • Haloperidol (schizo drug) makes rats dopey & inactive because it reduces dopaminergic neuron functions
  • Amphetamine makes rats hyperactive because it increases dopaminergic activity
  • Drug effects wear off in time
  • Help us study effects on learned behaviour before/after drugs administration
22
Q

Who is Claudia Gonzalez?

A
  • Administered nicotine while rats were learning new task then studied later acquisions of a new task
  • Earlier nicotine-enhanced motor learning impairs later motor learning
  • Exposure to psychomotor stimulants (amphetamine, cocaine, nicotine)–> long term effects on neural plasticity (ability to change in response to experience)–> impairs learning specific tasks

(Think “Claudia Clinic Gonzalez”)

23
Q

How has synthetic biology transformed the way we manipulate brain cells?

A
  • Design & construction of biological devices not found in nature
  • Include insertion/deletion of a genetic sequence into the genome of a living organism
  • CRISPR-Cas9–> fights viruses so you can cut DNA of any cell by providing the bacteria’s Cas9 protein, along with RNA sequence on the length of DNA you want to remove–> CRISPR cuts out those regions
  • DNA’s repair system is used to insert a new sequence to replace gap after removal
  • Can improve food security, counter microbes & parasites & eliminate inherited diseases
24
Q

What is optogenetics?

A
  • Using light to change the shape of an ion channel that has light-sensitive protein
  • Proteins that are derived from microorganisms are called opsins e.g ChR2or NpHR

(Think “Chert & Napar”)

  • ChR2 is sensitive to blue light & will open ion channel & depolarize the neuron—> excitation
  • NpHR is sensitive to green-yellow light & will activate a chloride pump & hyperpolarize the neuron–> inhibition
  • Optogenetics has high spatial & temporal resolution
  • Ion channels can be turned on/off on millisecond time scales
  • If the amygdala (fear & anxiety centre) of rats is targeted with opsins & exposed to inhibitory light–> rats show no fear unless the light is turned off again
25
Q

What is chemogenetics?

A
  • Known by DREADD (designer receptor exclusively activated by designer drugs)
  • G protein receptor that has a synthetic genetic sequence is engineered to respond only to a synthetic designer drug with small molecules
  • This drug activates only the modified receptors & receptors only get activated by this drug
  • Higher specificity than optogenetics
  • Lower temporal resolution because drugs take longer to take effect rather than light
26
Q

How do you track & measure the brain’s electrical activity?

A
  • Single-cell recording, electroencephalography, event-related potentials & magnetoencephalography
  • The electrical behaviour of cell bodies & dendrites–> give rise to graded potentials–> much more varied & slower
  • Electrical behaviour of axons–>give rise to action potentials–> much less varied & faster
27
Q

How do you record action potentials from single cells? (Single-Cell recording)

A

Microelectrodes can be placed next to cells (extracellular) or inside them (extracellular) to study a single neuron’s electrical activity

Intracellular advantages:
-Can distinguish the activity of 40 neurons at once
Intracellular disadvantages:
-Can kill the cell & cannot be done in awake & moving animals

-Single-cell recordings are confined to neurons in a dish or in living brain slices only for a few hours

28
Q

What did John O’Keefe show?

A
  • Neurons in the rat hippocampus fire when an animal is in a specific place in the environment
  • These place cells code the spatial location of the animals & contribute to the spatial world map in the brain
  • Place cells lack specificity in mice with mutations in spatial memory
  • Therefore, the cells fire to a very broad region–> lead to navigation difficulties
29
Q

How do you record graded potentials from thousands of cells? (EEG)

A

Hansberger–> electrical activity recorded by placing electrodes on the scalp

Electrocorticography (ECoG)–> method used during neurosurgery in which electrodes are placed on the cerebral cortex to match wave activity of specific regions

  • EEG measures summed graded potentials from thousands of neurons
  • Waves are recorded by a computer
  • Waves change as behaviour changes & displays various patterns; some of which are rhythmical
  • Electrical activity still exists even a person is asleep or comatose
  • EEG has low amplitude & fast frequency during arousal, but a rhythmical pattern during relaxation
  • Alpha waves are extremely regular, with a frequency of 11 cycles per second, with varying amplitudes
  • Alpha waves are generated in the visual cortex at the back of the brain & may stop abruptly if a person’s relaxation is interrupted
  • Waves become progressively slower &larger in amplitude during anesthesia, brain trauma or coma & it flat lines when brain dead
  • Useful for monitoring sleep stages & determining various types of epileptic seizures
30
Q

What are event-related potentials (ERPs)

A
  • EEG signals change in response to stimulus presentation
  • These changes produce complex waveforms called ERPs
  • ERPs are graded potentials on dendrites that a sensory stimulus triggers
  • We can detect ERPs through repeated production of stimulus & averaging the recorded response
  • This cancels out unrelated activity & only shows potentials that the stimulus generated
  • For auditory ERP, a tone is presented at time 0
  • EEG activity response is recorded
  • EEG sequence develops a distinctive shape & becomes extremely clear after these 100 responses are averaged
  • Positive & negative waves appearing at different times after stimulus presentation are used for analysis

Advantage:

  • Noninvasive
  • Inexpensive, just like EEG
  • Can record diff areas of the brain
  • Can detect which brain areas are processing that stimuli
  • Study the order that regions participate in stimuli processing (shows the route that info takes through the brain)

Useful in studying:

  • Areas most sensitive to ageing
  • How people compensate for brain injuries
  • How children process info differently as they mature
31
Q

Describe MEG & its use:

A
  • The magnetic counterpart of EEG & ERP
  • Neural activity produces a magnetic field that is strong enough to be recorded on the scalp
  • Magnetic waves conducted through living tissue undergo less distortion than electrical signals–> MEG has higher resolution than ERP

Advantages:

  • Can identify source of activity more precisely
  • Useful for locating the source of seizures

Disadvantages:
-Expensive

32
Q

Describe CT & its use

A
  • Computed tomography by Cormack & Hounsfield
  • The narrow X-ray beam can be passed through same object at many angles, creating many images which can be combined to produce a 3D image of the brain
  • X-ray absorption depends on tissue density
  • High-density tissue (i.e bone) absorbs a lot of radiation
  • Neural tissue absorbs some radiation
  • Low-density tissue (i.e blood, ventricular fluid) absorbs little
  • Dark colours on CT scanning software–> low-density regions
  • Light colours–> high density regions
  • Skull is dense, so it forms a white border
  • Little density difference between white matter & grey matter so it shows up on CT as a homogenous grey
  • Ventricles are dense, but due to the CSF in them which is far less dense, they show up as darker
  • Lesions are damaged regions with fewer neurons & more fluid–> appear as a dark area in CT scan
33
Q

Describe MRI & its use:

A
  • Alternative to CT scan
  • Hydrogen atoms behave like spinning bar magnets in the presence of magnetic field
  • When placed in a static magnetic field, these atoms line up in parallel & orient towards the line of force
  • In the MRI scanner, radio pulses are applied to the brain
  • Brain’s atoms have already been aligned due to the magnetic field, so each radio pulse forms a second field
  • This second field causes parallel atoms to spin again into a new orientation
  • As each radio pulse ends–> Hydrogen atoms get parallel again–> emit a small amount of energy
  • The coil detects this & computer re-creates position of hydrogen atoms through a magnetic resonance image
  • This is based on the density of hydrogen atoms in different regions
  • Areas with higher water content (cell-body rich areas) stand out from areas with lower water content (axon-rich areas)
34
Q

What is Diffusion tensor imaging? (DTI)

A
  • An MRI method detecting directional movements of water molecules–> show nerve fibre pathways in the brain
  • Water moves less freely across cell membranes as opposed to how they move in axons
  • The direction of water movement is detected by a coil & interpreted by a computer–>display abnormalities in neural pathways
  • Also, they identify changes in fibre myelination
  • Useful for detecting (MS, stroke, concussion)
35
Q

What is Magnetic resonance spectroscopy (MRS)?

A
  • An MRI method that uses a hydrogen proton signal to determine concentration of brain metabolites in brain tissue
  • Useful for detecting persisting abnormalities in brain metabolism in concussion
36
Q

How did fMRI get discovered?

A
  • Researchers measure changes in brain activity by looking at blood flow, oxygen & glucose usage while solving cognitive problems

Peter Fox discovered the following process:
1) Active neurons use more oxygen–>
2) lowered blood oxygen level
3) increased blood CO2 levels
4) dilated blood vessels
5) increased blood flow
6) more oxygen transported to that area via hemoglobin of
red blood cells
7) Changes in the ratio of oxygen alter blood’s magnetic properties (oxygen-rich hemoglobin is less magnetic than oxygen-poor hemoglobin)

-Segi Ogawa showed that MRI could match these changes to specific brain locations–> fMRI came to be

(Think “Fox & Sag”)

37
Q

Describe fMRI & its use:

A
  • Functional changes in the brain are inferred from increases/decreases in MRI signal that is caused by changes in Oxygen levels
  • fMRI changes in activity can be attributed to particular structures

Advantages:
-Good spatial resolution (1mm) of the brain activity’s source due to dense blood vessel supply to the cerebral cortex

Disadvantages:

  • Must lie still in a noisy tube for a long time
  • Low temporal resolution due to changes in blood flow taking 1/3 of a second (EEG & ERP are faster)

rsFMRI–> Inferring brain function by studying fMRI signals when participants are resting (not engaged in tasks)

  • Asked to focus on a cross or keep their eyes closed
  • The scanner collects activity for at least 4 mins
38
Q

Describe Optical tomography & its use:

A
  • fNIRS is a form of OT & measures the same thing as fMRI but with different tools
  • An array of optical transmitter & receiver pairs are fitted across the scalp
  • One requirement is that the object at least can partially transmit light
  • OT can image soft body tissue (breast/brain)
  • In fNIRS, reflected infrared light is used to determine blood flow because oxygen-rich & oxygen-poor hemoglobin absorb light differently
  • We can measure the brain’s average oxygen consumption by measuring the blood’s light absorption

Advantage:

  • Easy to hook up subjects repeatedly & record them for short periods
  • Used to differentiate cancerous from noncancerous brain tissue

Disadvantage:

  • Light doesn’t penetrate deep into the brain–> restricted to measuring cortical activity
  • Low spatial resolution
39
Q

Describe positron tomography (PET) & its use

A
  • Use PET to study the metabolic activity of brain cells engaged in processing brain functions (e.g language)
  • Detects changes in the brain’s blood flow by measuring changes in uptake of oxygen & glucose

-Doughnut shaped array of radiation detectors is placed on a person’s head

  • A small amount of water with radioactive molecules (15O which breaks down fast & is unstable) is injected into the bloodstream
  • 15O releases tiny subatomic positively charged particles called positrons which are attracted to negatively charged electrons in the brain
  • They collide & get annihilated which produces energy
  • Energy leaves the head at the speed of light–> detected by PET camera which located the source & generates an image
  • They subtract the blood-flow pattern when the brain is in a control state from blood-flow pattern when engaged in a task
  • The result shows the change in blood flow between the states–> reveal which brain areas are active during task

-Instead of measuring neural activity directly, PET assume that where blood-flow increases, neural activity increase

40
Q

What is the advantage & disadvantage of PET?

A

Disadvantage:

  • Radiochemicals must be prepared in cyclotron close to the scanner due to their short lives
  • Generating these materials is very expensive

Advantage:

  • Allows for the mapping of a wide range of brain changes & conditions
  • Can detect the amount & density of neurotransmitters & receptors
  • Detect metabolic activity associated with learning
  • Detect the degenerative process of ageing
41
Q

How do you measure brain chemistry?

A

-A chemical imbalance has serious consequences

-Parkinson’s disease–> low dopamine levels in the
substantia nigra

(Think “When you find parking, its dope)

-Depression–> low serotonin/noradrenaline production

(Think “sad people have a serious tone & no adrenaline”)

  • Must extract tissue postmortem from affected humans & perform high-performance liquid chromatography (HPLC) to measure chemical levels
  • Stimuli related to rewarding behaviour (food, sex)–> fluctuate dopamine levels in nucleus accumbens
  • Cerebral microdialysis & cerebral voltammetry can measure brain chemistry changes in animals
42
Q

What is microdialysis?

A
  • Can determine chemical constituents of extracellular fluid
  • A catheter with a semipermeable membrane at its tip is placed in the brain for fluid to flow through cannula & pass along cell membrane
  • causing molecules in the extracellular fluid to equilibrate across cannula membrane
  • Tube collects fluid containing the molecules & exists the brain
  • Used to monitor chemistry in injured brains (TBI or stroke) as there might be a drastic increase in neurotransmitter glutamate–> cause cell damage or death

(Think “Watch out for your glutes, mate you’re dead”)

43
Q

What is cerebral voltammetry?

A
  • Small carbon fibre electrode & metal electrode are implanted in the brain with a weak current passing through the metal one
  • Electrons are added or removed from surrounding chemicals due to current
  • Can identify levels of different transmitters (e.g serotonin, dopamine) because different currents produce different changes in compounds

Advantage:
-Not require fluid to be removed from the brain
Disadvantage:
-Require degradation of one chemical into another (only suitable for animal studies)

44
Q

What is the contribution of twin studies to neuroscience?

A

-Concordance rates of behavioural disorders in not perfect requires epigenetic influences
-Concordance rates of drug addiction & psychiatric disorders are strong
-BDNF is a compound called brain-derived neurotrophic factor–> role in stimulating neural plasticity
-Mood disorder & depression related to low levels of BDNF
The two alleles of this gene are Met & Val

(Think “BDNF went to Met ball in Valentino”)

45
Q

What did Joshua Bueller demonstrate?

A

-Met allele is associated with 11% reduction in hippocampal volume, poor episodic memory & high incidence of dementia

(Think “BDNF forgot there was met ball”)

-Val allele is associated with a high incidence of neuroticism & anxiety disorders, but better episodic memory

(Think “Valentine was neurotic & anxious”)

  • The two alleles produce different phenotypes–>influence brain structure/function differently
  • Cause of ADHD is unknown but involves dopamine receptors in the forebrain (basal ganglia & frontal lobe)
46
Q

What was Mario Farga’s gene-expression interaction study?

A

studied 40 pairs of identical twins

  • When measured in childhood, gene expression was virtually identical
  • 50-year-old twins–> differences that would have made them non-twin siblings
  • Lifestyle factors play a role

(Think “Mario had a twin brother Luigi”)

  • E.g maternal attention leads to altered expression of genes in the adult hippocampus of rats in relation to infants’ stress response in adulthood
  • Stressing out pregnant rats changed gene expression in offspring of rats but the same experience changed different regions differently
47
Q

What is morphology?

A

-Morphology (structure) in postmortem tissue allows detailed analysis of structure & identifying brain pathology

48
Q

What are some benefits in studying Rats?

A
  • Use normal variance in the performance of rats on a variety of tests of working memory & cognitive functioning to study ADHD
  • Treating rats with Methylphenidate or Ritalin (a drug for ADHD) improves their performance
  • Rat strain Kyoto SHR is a good model for ADHD studies because it presents abnormalities in prefrontal dopaminergic nevers that correlates with hyperactivity
49
Q

What are the regulating bodies in animal experiments?

A
  • Use of animals in research is only acceptable if it promises contribution to understanding issues that can benefit everyone
  • Must maintain public confidence that animals were used humainly and in a justified way to obtain credibility for your study
  • Animals are only used when best efforts have failed to find alternative solutions
  • Animal Welfare Act indicates that they must provide assurance that study meets minimum regulations & confirms to guidelines for care
  • Encouraged to seek voluntary accreditation from a private non-profit organization promoting animal welfare
  • Companies are not required to follow this process, so they use good laboratory practice (GLP)