Chapter 3: The Cellular Level of Organization Flashcards
Define a cell.
Parts of a Cell
- Basic, living, structural and functional units of body.
- Body consists of more than 100 trillion cells.
Parts of a Cell
What are the 3 main parts of a cell?
Parts of a Cell
- Plasma membrane.
- Cytoplasm.
- Nucleus.
Parts of a Cell
Define the plasma membrane of a cell.
Parts of a Cell
- Cell’s flexible outer surface, separates cell’s internal environment from external environment.
- Selective barrier, regulates flow of materials into/out of cell.
- Helps establish/maintain environment for normal cellular activity.
- Communication among cells and between cells and external environment.
Parts of a Cell
Define the cytoplasm of a cell.
Parts of a Cell
- All cellular contents between plasma membrane and nucleus. Has 2 components: cytosol and organelles.
1. Cytosol: Fluid portion of cytoplasm (intracellular fluid), contains water, dissolved solutes, suspended particles. Within cytosol are different types of organelles.
2. Organelles: Characteristic shape, specific functions. Examples: cytoskeleton, ribosomes, endoplasmic reticulum, golgi comples, lysosomes, peroxisomes and mitochondria.
Parts of a Cell
Define the nucleus of a cell.
Parts of a Cell
- Large organelle, houses most of cell’s DNA.
- Within nucleus, each chromosome contains thousands of hereditary units (genes) that control most of cellular structure and function.
Parts of a Cell
What are the functions of the plasma membrane?
The Plasma Membrane
- Barrier separates inside and outside of cell.
- Controls flow of substances into/out of cell.
- Identifies the cell to other cells (e.g. immune cells).
- Participates in intracellular signaling.
The Plasma Membrane
What is the fluid moasic model?
The Plasma Membrane
- Arrangement of lipids and proteins in plasma membrane.
- Some proteins float, others anchored at specific locations.
- Membrane lipids allow passage of lipid-soluble molecules but act as barrier to entry/exit of charged/polar molecules and ions into/out of cell.
- Other proteins act as signal receptors/as molecules that link plasma membrane to intracellular/extracellular proteins.
The Plasma Membrane
Define the lipid bilayer.
The Plasma Membrane
- Framework of plasma membrane.
- 2 back-to-back layers made up of three types of lipid molecules: phospholipids, cholesterol and glycolipids.
- Bilayer arrangement occurs as lipids are amphipathic molecules (have both polar and nonpolar parts).
The Plasma Membrane
Define phospholipids in the lipid bilayer.
The Plasma Membrane
- Lipids that contain phosphorus.
- About 75% of membrane lipids are phospholipids.
The Plasma Membrane
Define cholesterol in the lipid bilayer.
The Plasma Membrane
- Present in smaller amounts (about 20%).
- Steroid with attached -OH (hydroxyl) group.
- Cholesterol molecules are weakly amphipathic, are interspersed among other lipids in both layers of membrane.
The Plasma Membrane
Define glycolipids in the lipid bilayer.
The Plasma Membrane
- About 5% of the membrane lipids.
- Are lipids with attached carbohydrate groups.
The Plasma Membrane
What are integral proteins?
The Plasma Membrane
- Membrane protein that extends into/through lipid bilayer, firmly embedded into it.
- Most are transmembrane proteins (span entire lipid bilayer, protrude into both cytosol and extracellular fluid).
- Few integral proteins are tightly attached to one side of bilayer by covalent bonding to fatty acids.
- Integral membrane proteins are amphipathic.
The Plasma Membrane
What are glycoproteins?
The Plasma Membrane
- Proteins with carbohydrate groups attached to ends that protrude into extracellular fluid.
- Carbohydrates are oligosaccharides (chains with 2 to 60 monosaccharides, may be straight or branched)
The Plasma Membrane
What is the glycocalyx?
The Plasma Membrane
- Sugary coat formed by carbohydrate portions of glycolipids and glycoproteins.
- Acts like molecular “signature”, enables cells to recoginize one another.
- Eenables cells to adhere to one another in some tissues, protects cells from being digested by enzymes in extracellular fluid.
- Hydrophilic properties of glycocalyx attract a film of fluid to surface of many cells.
The Plasma Membrane
What is the function of ion channels (integral) in membrane proteins?
The Plasma Membrane
- Forms pore/hole which specific ion can flow across membrane.
- Most are selective; allow only single type of ion to pass through.
- Most plasma membranes include specific channels for several common ions.
The Plasma Membrane
What is the function of carriers (integral) in membrane proteins?
The Plasma Membrane
- Integral proteins that act as carriers, selectively moving a polar substance/ion from one side of membrane to other.
- Carrier proteins, known as transporters.
- Example: amino acids, needed to synthesize new proteins, enter body cells via carriers.
The Plasma Membrane
What is the function of receptors (integral) in membrane proteins?
The Plasma Membrane
- Integral proteins serve as cellular recoginition sites.
- Receptor recognizes and binds specific type of molecule.
- Specific molecule that binds to receptor is called a ligand of that receptor.
- Recognizes specific ligand, alters cell’s function in some way. Example: Antidiuretic hormone binds to receptors in kidneys, changes water permeability of certain plasma membranes.
The Plasma Membrane
What is the function of enzymes (integral and peripheral) in membrane proteins?
The Plasma Membrane
- Integral proteins that catalyze specific chemical reactions at inside/outside surface of cell.
- Example: lactase protruding from epithelial cells lining small intestine splits disaccharide lactose in milk.
The Plasma Membrane
What is the function of linkers (integral and peripheral) in membrane proteins?
The Plasma Membrane
- Anchor proteins in plasma membranes of neighboring cells to one another or to protein filaments inside/outside cell.
- Anchors filaments inside/outside plasma membrane, provide structural stability and shape for cell.
- Peripheral proteins also serve as enzymes and linkers.
The Plasma Membrane
What is the function of cell identy markers (glycoproteins) in membrane proteins?
The Plasma Membrane
- Membrane glycoproteins and glycolipids often serve as cell-identity markers.
May enable cell to:
1. Recognize other cells of same kind during tissue formation.
2. Recognize/respond to potentially dangerous foreign cells. Example: ABO blood type markers.
The Plasma Membrane
What are some functions of peripheral proteins?
The Plasma Membrane
- Help support plasma membrane.
- Anchor integral proteins.
- Participate in mechanical activities (ex: moving materials and organelles within cells, changing cell shape during cell division and in muscle cells, and attaching cells to one another.
The Plasma Membrane
Describe membrane fluidity.
The Plasma Membrane
- Membrane lipids and proteins rotate/move sideways in their own half of bilayer.
- Neighboring lipid molecules exchange places about 10 million times per second, may wander completely around cell in minutes.
- Fluidity depends on number of double bonds in fatty acid tails of the lipids that make up bilayer, and on amount of cholesterol present.
The Plasma Membrane
How does membrane fluidity increase?
The Plasma Membrane
- Each double bond puts “kink” in fatty acid tail, increases fluidity by preventing lipid molecules from packing tightly in membrane.
The Plasma Membrane
How does cholesterol effect the membrane fluidity?
The Plasma Membrane
- Makes lipid bilayer stronger but less fluid at normal body temperature.
- At low temperatures, increases membrane fluidity.
The Plasma Membrane
Describe permeable (in relation to membrane permeability).
The Plasma Membrane
Structure permits passage of substances through it.
The Plasma Membrane
Describe impermeable (in relation to membrane permeability).
Structure does not permit passage of substances through it.
Describe selective permeability (in relation to membrane permeability).
The Plasma Membrane
- Permits some substances to pass more readily than others.
- Permeability of plasma membrane to different substances varies.
The Plasma Membrane
Describe the lipid bilayer portion of plasma membranes permeability.
The Plasma Membrane
- Highly permeable to nonpolar molecules such as oxygen (O2), carbon dioxide (CO2), steroids.
- Moderately permeable to small, uncharged polar molecules such as water, urea (waste product from breakdown of amino acids).
- Impermeable to ions and large, uncharged polar molecules such as glucose.
- Permeability characteristics of plasma membrane is because lipid bilayer has nonpolar, hydrophobic interior.
The Plasma Membrane
How do macromolecules pass the plasma membrane?
The Plasma Membrane
Unable to pass across plasma membrane except by endocytosis or exocytosis.
The Plasma Membrane
What is a concentration gradient?
The Plasma Membrane
- Difference in concentration of a chemical from one place to another (ex: inside to outside of plasma membrane).
- Example: oxygen molecules and sodium ions (Na+) are more concentrated in extracellular fluid than in cytosol.
The Plasma Membrane
What is an electrical gradient?
The Plasma Membrane
- Difference in electrical charges between two regions.
- Inner surface of plasma membrane is more negatively charged, outer surface is more positively charged.
- Occurs across plasma membrane, charge difference is called membrane potential.
The Plasma Membrane
Why are the concentration gradient and electrical grandient important?
The Plasma Membrane
- Help move substances across the plasma membrane.
- Substance will move across plasma membrane down its concentration gradient.
- Positively charged substance tend to move toward negatively charged area, and vice versa.
The Plasma Membrane
What is an electrochemical gradient?
The Plasma Membrane
Combined influence of concentration gradient and electrical gradient on movement of a particular ion.
The Plasma Membrane
Define passive processes in transport across the plasma membrane.
Transport across the Plasma Membrane
- Substance moves down its concentration or electrical gradient to cross membrane using only its own kinetic energy (energy of motion).
- Kinetic energy is intrinsic to particles that are moving. No input of energy from cell. Example: Simple diffusion.
Transport across the Plasma Membrane
Define active processes in transport across the plasma membrane.
Transport across the Plasma Membrane
- Cellular energy is used to drive substance “uphill” against its concentration or electrical gradient.
- Cellular energy used, usually form of adenosine triphosphate (ATP).
- Another way some substances may enter/leave cells is active process, tiny, spherical membrane sacs (vesicles) are used.
Transport across the Plasma Membrane
What is diffusion?
Transport across the Plasma Membrane
- Passive process, random mixing of particles in solution occurs because of particles’ kinetic energy.
- Both the solutes (dissolved substances) and solvent (liquid that does dissolving), undergo diffusion.
Transport across the Plasma Membrane
How does diffusion work?
Transport across the Plasma Membrane
- If particular solute is present in high concentration in one area of solution and in low concentration in another area, solute molecules will diffuse towards area of lower concentrationmove down their concentration gradient.
- Particles become evenly distributed throughout solution and solution is at equilibrium. Particles continue to move about randomly due to kinetic energy, but their concentrations do not change.
Transport across the Plasma Membrane
What factors influence the diffusion rate of substances across plasma membranes?
Transport across the Plasma Membrane
- Steepness of concentration gradient.
- Temperature.
- Mass of diffusing substance.
- Surface area.
- Diffusion distance.
Transport across the Plasma Membrane
How does steepness of the concentration gradient effect the diffusion rate?
Transport across the Plasma Membrane
- Greater the difference in concentration between the 2 sides of membrane, the higher the rate of diffusion.
- When charged particles are diffusing, steepness of electrochemical gradient determines diffusion rate across membrane.
Transport across the Plasma Membrane
How does temperature effect the diffusion rate?
Transport across the Plasma Membrane
Higher the temperature, the faster the rate of diffusion.
Transport across the Plasma Membrane
How does mass of the diffusing substance effect the diffusion rate?
Transport across the Plasma Membrane
The larger the mass of diffusing particle, the slower the diffusion rate.
Transport across the Plasma Membrane
How does surface area effect the diffusion rate?
Transport across the Plasma Membrane
- The larger the membrane surface area available for diffusion, the faster the diffusion rate.
- Example: air sacs of lungs have large surface area available for diffusion of oxygen from air into blood.
Transport across the Plasma Membrane
How does diffusion distance effect the diffusion rate?
Transport across the Plasma Membrane
- The greater the distance over which diffusion must occur, the longer it takes.
- Diffusion across a plasma membrane takes fraction of a second because membrane is thin.
Transport across the Plasma Membrane
What are the three types of diffusion?
Transport across the Plasma Membrane
- Simple diffusion.
- Facilitated diffusion.
- Osmosis.
Transport across the Plasma Membrane
What is simple diffusion?
Transport across the Plasma Membrane
- Passive process, substances move freely through lipid bilayer of plasma membranes of cells without help of membrane transport proteins.
- Nonpolar, hydrophobic molecules move across lipid bilayer through this process.
- Such molecules include: oxygen, carbon dioxide and nitrogen gases; fatty acids; steroids; and fat-soluble vitamins (A, D, E, K). Small uncharged polar molecules such as water, urea and small alcohols.
Transport across the Plasma Membrane
What is facilitated diffusion?
Transport across the Plasma Membrane
- Integral membrane protein assists specific substance across membrane.
- Integral membrane protein can be either a membrane channel or carrier.
- Moves solutes that are too polar or too highly charged to move through lipid bilayer by simple diffusion.
Transport across the Plasma Membrane
What is channel-mediated facilitated diffusion?
Transport across the Plasma Membrane
- Solute moves down its concentration gradient across lipid bilayer through membrane channel.
- Most membrane channels are ion channels (integral transmembrane proteins that allow passage of small, inorganic ions that are too hydrophilic to penetrate the nonpolar interior of the lipid bilayer).
- Each ion can diffuse across membrane only at certain sites.
Transport across the Plasma Membrane
What ion channels are common in plasma membranes?
Transport across the Plasma Membrane
- Most numerous are selective for K+ (potassium ions) or Cl- (chloride ions).
- Fewer channels are available for Na+ (sodium ions) or Ca2+ (calcium ions).
Transport across the Plasma Membrane
Why is diffusion of ions through channels slower?
Transport across the Plasma Membrane
- Slower than free diffusion throughout lipid bilayer because channels occupy smaller fraction of membrane’s total surface area than lipids.
- Facilitated diffusion through channels is still very fast process.
Transport across the Plasma Membrane
How is a channel gated in membrane channels?
Transport across the Plasma Membrane
- Channel protein acts as “plug” or “gate”, change shape in one way to open pore, in another way to close it.
- Alternate between open/closed positions.
- Others regulated by chemical or electrical changes inside and outside cell.
Transport across the Plasma Membrane
What is carrier-mediated facilitated diffusion?
Transport across the Plasma Membrane
- Carrier (transporter) moves solute down its concentration gradient across plasma membrane.
- Passive process, no cellular energy required.
- Solute binds to specific carrier on one side of membrane and is released on other side after carrier undergoes change in shape.
Transport across the Plasma Membrane
What is the transport maximum?
Transport across the Plasma Membrane
- Number of carriers available in a plasma membrane places an upper limit on rate of which facilitated diffusion can occur.
- Once all carriers are occupied, transport maximum is reached and a further increase in concentration gradient does not increase rate of facilitated diffusion.
Transport across the Plasma Membrane
What substances move across the plasma membrane by carrier-mediated facilitated diffusion?
Transport across the Plasma Membrane
Glucose, fructose, galactose and some vitamins.
Transport across the Plasma Membrane
How does glucose cross the plasma membrane?
Transport across the Plasma Membrane
Enters many body cells by carrier-mediated facilitated diffusion.
1. Glucose binds to specific type of carrier protein (glucose transporter (GluT)) on outside surface of membrane.
2. As transporter undergoes change in shape, glucose passes through membrane.
3. Transporter releases glucose on other side of membrane.
Transport across the Plasma Membrane
What is osmosis?
Transport across the Plasma Membrane
- Type of diffusion, net movement of a solvent through selectively permeable membrane.
- Passive process.
- In living systems, solvent is water, which moves by osmosis across plasma membranes from area of higher water concentration to area of lower water concentration.
Transport across the Plasma Membrane
How do water molecules pass through the plasma membrate during osmosis?
Transport across the Plasma Membrane
In two ways:
1. Moving between neighboring phospholipid molecules in lipid bilayer via simple diffusion.
2. Moving through aquaporins (or AQPs), which are integral membrane proteins that function as water channels.
Transport across the Plasma Membrane
What are aquaporins (AQPs)?
Transport across the Plasma Membrane
- Integral membrane proteins, function as water channels.
- Play critical role in controlling water content of cells.
- Responsible for production of cerebrospinal fluid, aqueous humor, tears, sweat, saliva and concentration of urine.
Transport across the Plasma Membrane
When does osmosis occur?
Transport across the Plasma Membrane
When a membrane is permeable to water but is not permeable to certain solutes.
Transport across the Plasma Membrane
Define hydrostatic pressure.
Transport across the Plasma Membrane
Pressure exerted by a fluid at equilibrium at any point in time due to force of gravity.
Transport across the Plasma Membrane
Define osmotic pressure.
Transport across the Plasma Membrane
- Osmotic pressure of a solution is proportional to concentration of solute particles that cannot cross membrane.
- Higher the solute concentration, the higher the solution’s osmotic pressure.
Transport across the Plasma Membrane
Define a solution’s tonicity.
Transport across the Plasma Membrane
Measure of solution’s ability to change the volume of cells by altering their water content.
Transport across the Plasma Membrane
What is an isotonic solution?
Transport across the Plasma Membrane
- Any solution in which a cell maintains its normal shape and volume.
- Shape is maintained as there is no net water movement into or out of cells.
Transport across the Plasma Membrane
What is a hypotonic solution?
Transport across the Plasma Membrane
A solution that has a lower concentration of solutes than that inside a cell.
Transport across the Plasma Membrane
What is a hypertonic solution?
Transport across the Plasma Membrane
A solution that has a higher concentration of solutes than that inside the cell.
Transport across the Plasma Membrane
Describe what happens to RBCs in an isotonic solution.
Transport across the Plasma Membrane
- RBCs maintain their normal shape and volume.
- Concentrations of solutes that cannot cross the plasma membrane are the same on both sides of membrane in this solution.
- Example: 0.9% NcCl solution is isotonic for RBCs. Water molecules enter/exit at same rate.
Transport across the Plasma Membrane
Describe what happens to RBCs in a hypotonic solution.
Transport across the Plasma Membrane
- Water molecules enter cell faster than they leave, causing RBCs to swell, eventually burst.
- Rupture of RBCs in this manner is called hemolysis.
Transport across the Plasma Membrane
Describe what happens to RBCs in a hypertonic solution.
Transport across the Plasma Membrane
- Water molecules move out of cells faster than they enter, causing cells to shrink.
- Shrinkage of cells is called crenation.
- Example of hypertonic solution: 2% NaCl
Transport across the Plasma Membrane
Define active transport.
Transport across the Plasma Membrane
Substance is moved across a plasma against its concentration gradient (“uphill”). Energy is required for carrier proteins to move solutes across membrane against a concentration gradient.
Two sources of cellular energy can be used.
1. Primary active transport: Obtained from hydrolosis of ATP.
2. Secondary active transport: From energy stored in an ionic concentration gradient.
Transport across the Plasma Membrane
Define primary active transport.
Transport across the Plasma Membrane
- Energy derived from hydrolysis of ATP changes shape of carrier protein, “pumps” substance across plasma membrane against its concentration gradient.
- Body expends about 40% of ATP it generates on primary active transport.
Transport across the Plasma Membrane
What is the sodium-potassium pump?
Transport across the Plasma Membrane
- Expels sodium ions (Na+) from cells, brings potassium ions (K+) into cell.
- Part of pump acts as an ATPase (enzyme that hydrolyzes ATP), often called Na+-K+ ATPase.
Transport across the Plasma Membrane
What is the function of the sodium-potassium pump?
Transport across the Plasma Membrane
- Maintain low concentration of Na+ in cytosol by pumping these ions into extracellular fluid against Na+ concentration gradient.
- Pumps move K+ into cells against K+ concentration gradient.
- Maintains low concentration of Na+ and high concentration of K+ in cytosol.
Transport across the Plasma Membrane
How does the sodium-potassium pump operate?
Transport across the Plasma Membrane
- Three Na+ in cytosol bind to pump protein.
- Binding of Na+ triggers hydrolysis of ATP into ADP, reaction attaches phosphate group to pump protein. Chemical reaction changes shape of pump protein, expelling the 3 Na+ into extracellular fluid. Shape of pump protein favors binding of 2 K+ into extracellular fluid to pump protein.
- Binding of K+ triggers release of phosphate group from pump protein. Reaction causes shape of pump protein to change.
- As pump protein reverts to its original shape, releases K+ into cytosol. Pump is ready again to bind 3 Na+, cycle repeats.
Transport across the Plasma Membrane
Define secondary active transport.
Transport across the Plasma Membrane
- Energy stored in a Na+ or H+ concentration gradient is used to drive other substances across membrane against their own concentration gradients.
- Indirectly uses energy obtained from hydrolysis of ATP.
- Carrier protein simultaneously binds to Na+ and another substances, then changes shape so both substances cross membrane at same time.
Symporters: Moving 2 substances in same direction.
Antiporters: Moving 2 substances in opposite directions.
Transport across the Plasma Membrane
Define a vesicle.
Transport across the Plasma Membrane
- Small, spherical sac.
- Variety of substances are transported from one structure to another within cells.
- Import materials from and release materials into extracellular fluid.
Transport across the Plasma Membrane
Define endocytosis.
Transport across the Plasma Membrane
Materials move into a cell in a vesicle formed from plasma membrane. 3 types of endocytosis:
1. Receptor-mediated endocytosis
2. Phagocytosis
3. Bulk-phase endocytosis
Transport across the Plasma Membrane
What is Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Imports materials needed by cells.
- Highly selective type of endocytosis, cells take up specific ligands (ligands are molecules that bind to specific receptors).
- Vesicle forms after receptor protein in plasma membrane recognizes and binds to a particular particle in extracellular fluid.
Transport across the Plasma Membrane
What is the process of Receptor-medicated endocytosis?
Transport across the Plasma Membrane
- Binding
- Vesicle formation
- Uncoating
- Fusion within endosome
- Recycling of receptors to plasma membrane
- Degradation in lysosomes
Transport across the Plasma Membrane
What occurs during binding in Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Extracellular side of plasma membrane, LDL particle that contains cholesterol binds to specific receptor in plasma membrane to form a receptor-LDL complex.
- Receptors are integral membrane proteins that are concentrated in regions of plasma membrane called clathrin-coated pits.
- Protein called clathrin attaches to membrane on cytoplasmic side. Clathrin molecules come together, forming basketlike structure around receptor-LDL complexes that causes membrane to invaginate (fold inward).
Transport across the Plasma Membrane
What occurs during vesicle formation in Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Invaginated edges of membrane around clathrin-coated pit fuse, and a small piece of membrane pinches off.
- Resulting vesicle (clathrin-coated vesicle), contains receptor-LDL complexes.
Transport across the Plasma Membrane
What occurs during uncoating during Receptor-mediated endocyctosis?
Transport across the Plasma Membrane
- Almost immediately after formed, clathrin-coated vesicle loses it clathrin coat to become an uncoated vesicle.
- Clathrin molecules either return to inner surface of plasma membrane or help forms coats on other vesicles inside cell.
Transport across the Plasma Membrane
What occurs during fusion with endosome during Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Uncoated vesicle quickly fuses with vesicle known as an endosome.
- Within an endosome, the LDL particles seperate from their receptors.
Transport across the Plasma Membrane
What occurs during recycling of receptors to plasma membrane of Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Receptors accumulate in enlongated protrusions of the endosome.
- These pinch off, forming transport vesicles that return the receptors to plasma membrane.
- An LDL receptor is returned to plasma membrane about 10 minutes after it enters cell.
Transport across the Plasma Membrane
What occurs during degradation in lysosomes in Receptor-mediated endocytosis?
Transport across the Plasma Membrane
- Transport vesicles, which contain LDL particles, bud off the endosome and fuse with a lysosome (contain many digestive enzymes).
- Certain enzymes break down large protein and lipid molecules of LDL particle into amino acids, fatty acids, cholesterol.
- Smaller molecules then leave the lysosome.
- Cell uses cholesterol for rebuilding membranes and for synthesis of steroids (ex. estrogen).
- Fatty acids and amino acids can be used for ATP production or to build other molecules needed by the cell.
Transport across the Plasma Membrane
What is Phagocytosis?
Transport across the Plasma Membrane
- Form of endocytosis in which cell engulfs large solid particles, such as worn-out cells, whole bacteria, or viruses.
- Only few body cells, called phagocytes, are able to carry out phagocytosis.
- Vital defense mechanism that helps protect the body from disease.
Transport across the Plasma Membrane
What are the two main types of phagocytes?
Transport across the Plasma Membrane
- Macrophages (located in many body tissues).
- Neutrophils (a type of white blood cell).
Transport across the Plasma Membrane