ch 12 - Bioenergetics and Regulation of Metabolism Flashcards
open systems
biological systems that exchange both energy and matter with the environment
Internal engery
italicized U - sum of all of the different interactions between and within atoms in a system; vibration, rotation, linear motion, and stored chemical energies are all contributors
First Law of Thermodynamics
deltaU=Q-W. Work refers to changes in pressure and volume. Q = heat or heat exchange
enthalpy
delta-italicized H. measures overall change in heat of a system during a rxn. at constant pressure and volume, enthalpy and thermodynamics heat exchange (Q) are equal
entropy
delta italicized S. measures the degree of disorder or energy dispersion in a system. Units J/K
Gibbs Free energy equation
deltaG=deltaH-TdeltaS. H is enthalpy. T is temp. S is entropy. Spontaneous reactions move forward and have a negative G value. Moves toward zero as reaction approaches equilibrium
standard free energy
deltaG-degree sign - energy change that occurs at standard concentrations of 1 M, pressure of 1 atm and temp of 25 C.
standard free energy relationship to Gibb’s free energy
deltaG=delta G-degree sign + RT ln (Q). delta G is Gibb’s free energy. delta G-degree sign is standard free energy. R is universal gas constant. T is temp. Q is reaction quotient.
modified standard state
modified because a 1 M concentration of protons would have pH 0 and be far too acidic. modified standard state is [H+]=10^-7 M with pH of 7. with this delta G-degree sign is changed to delta G-degree sign’.
amount of energy produced by ATP under physiological conditions
30 kJ/mol
role of cAMP and amount and deltaG-degree sign’
second messenger, delta G degree sign’ = -50.4 kJ/mol
function of creatine phosphate and modified standard state of free energy
direct phosphorylation in muscle, delta G degree sign’ = -43.3 kJ/mol
function of ATP and modified Gibb’s free energy
energy turnover in all cell types (mid-level energy carrier); delta G degree sign’ = -30.5 kJ/mol
function and modified Gibb’s free energy of Glucose 6-phosphate
intermediate of glycolysis and gluconeogenesis; delta G degree sign’ = -13.9
function and modified Gibb’s free energy state of AMP
ATP synthesis; delta G degree sign’ = -9.2
ADP
adenosine diphosphate - produced if one phosphate group is removed from ATP.
AMP
adenosine monophosphate - produced if two phosphate groups are removed from ATP
what do many coupling reactions use
energy harnessed from hydrolysis of ATP
ATP cleavage
transfer of a high-energy phosphate group from ATP to another molecule, which generally activates or inactivates the target molecule
Phosphoryl group transfers
ATP provides phosphate group as a reactant.
Hess’s law to calculate the difference in free energy between reactants and products
creatine phosphate + H2O -> creatine + P sub i – (free energy = -43.3 kJ/mol) + ADP + P sub i -> ATP + H2 – (free energy = 30.5 kJ/mol for a total of creatine phosphate + ADP -> creatine + ATP (free energy total = -12.8 kJ/mol)
half-reactions
division of oxidation-reduction reactions into components to determine how many e-s are being transferred. Number of e-s must be equal on both sides of reaction. Spontaneous have -delta G and positive elecromotive force (E)
high-energy electron carriers in the cytoplasm
soluble - NADH, NADPH, FADH2, ubiquonone, cytochromes and glutathione