Cellular Energetics & Enzymes Flashcards
What are enzymes
Biological catalyst
Proteins and some RNA molecules
What do enzymes end with? What does the prefix mean?
ase
Refers to substrate
Where does the substrate connect with the enzyme?
Activation site
What is topoisomerase?
Minimizes mechanical stress on DNA during replication
MAKES TEMPORARY CUT IN HELIX
Rubisco
Attaches carbon dioxide to sugar precursor molecules in photosynthesis
50% found in chloroplasts
What is a co enzyme
Non protein organic molecules
Vitamins
One type of enzyme activator
What is a co factor
Inorganic enzyme activator
Minerals
Iron
Zinc
Copper
What is a prosthetic group
Permanent molecules bound to the enzyme that change the quaternary structure of the enzyme
Co factors can also be
Prosthetic groups
What is an irreversible enzyme inhibitor
Permanently changes the shape of the active site.
Neurotoxin
Not common in cells
What is a competitive enzyme inhibitor
Competes for active site. Has shape similar to substrate. Natural substances. Blocks substrate. Does not permanently change enzyme.
What is a noncompetitive enzyme inhibitor
Covalently bonded to amino acid sidechain. Bonds in another site that is not the active site.
All turns the shape of the enzyme and the active site.
Can be reversed after unbonded to enzyme.
Poinsons
What is another name for a non-competitive inhibitor
Allosteric regulation
What is allosteric regulation
Can either in Hibbett or stimulate enzyme. Allocators bond to other receptive site which causes enzyme to change shape.
Activators can stabilize the enzyme.
Usually happens with big enzymes (quaternary)
Reversible.
Helps give us on and off capability
What is feedback inhibition
The product of chemical reaction will many times serve as shutdown for pathway or as in inhibitor.
Common when there are many chemical reactions in a sequence
What is a catalyst
Any substance that increases the rate of chemical reaction while not participating in reaction
Lowers activation energy
Reusable
What is metabolism
Total sum of all chemical reactions in an organism.
What is catabolic metabolism? What is anabolic metabolism?
Used to power synthesis ATP from ADP and phosphate.
Respiration.
Is powered by ATP when required in a chemical reaction
What are endodontic reactions
Require energy (lower to higher energy arrangement)
Can not occur spontaneously.
Change in free energy is positive.
Most of the reactions are endergonic
What is ATP
Short-term energy molecule.
Tens of millions made/used per second per cell.
Molecule of choice in cells.
How is ATP bonded
Bonds between phosphate groups in nucleotide.
Triphosphates.
Relatively stable.
More energy released when bonds between our broken then is required by cell to initiate cleavage
HYDROLISYS
What is work?
Anything that requires atoms to be moved around through cellular actions
What our exergonic reactions
Release energy (higher to lower energy arrangements)
Spontaneously (once initiated)
Change in free energy is negative.
What is Gibbs free energy
Measurement of the amount of useful energy that system continues to perform work.
Cellular level = major source is the arranging of atoms to form higher energy compounds to lower