Cellular Energetics & Enzymes Flashcards

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1
Q

What are enzymes

A

Biological catalyst

Proteins and some RNA molecules

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2
Q

What do enzymes end with? What does the prefix mean?

A

ase

Refers to substrate

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3
Q

Where does the substrate connect with the enzyme?

A

Activation site

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4
Q

What is topoisomerase?

A

Minimizes mechanical stress on DNA during replication

MAKES TEMPORARY CUT IN HELIX

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5
Q

Rubisco

A

Attaches carbon dioxide to sugar precursor molecules in photosynthesis

50% found in chloroplasts

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6
Q

What is a co enzyme

A

Non protein organic molecules

Vitamins

One type of enzyme activator

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7
Q

What is a co factor

A

Inorganic enzyme activator

Minerals
Iron
Zinc
Copper

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8
Q

What is a prosthetic group

A

Permanent molecules bound to the enzyme that change the quaternary structure of the enzyme

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9
Q

Co factors can also be

A

Prosthetic groups

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10
Q

What is an irreversible enzyme inhibitor

A

Permanently changes the shape of the active site.

Neurotoxin

Not common in cells

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11
Q

What is a competitive enzyme inhibitor

A
Competes for active site. 
Has shape similar to substrate. 
Natural substances. 
Blocks substrate. 
Does not permanently change enzyme.
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12
Q

What is a noncompetitive enzyme inhibitor

A

Covalently bonded to amino acid sidechain. Bonds in another site that is not the active site.
All turns the shape of the enzyme and the active site.
Can be reversed after unbonded to enzyme.
Poinsons

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13
Q

What is another name for a non-competitive inhibitor

A

Allosteric regulation

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14
Q

What is allosteric regulation

A

Can either in Hibbett or stimulate enzyme. Allocators bond to other receptive site which causes enzyme to change shape.
Activators can stabilize the enzyme.
Usually happens with big enzymes (quaternary)
Reversible.
Helps give us on and off capability

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15
Q

What is feedback inhibition

A

The product of chemical reaction will many times serve as shutdown for pathway or as in inhibitor.
Common when there are many chemical reactions in a sequence

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16
Q

What is a catalyst

A

Any substance that increases the rate of chemical reaction while not participating in reaction

Lowers activation energy

Reusable

17
Q

What is metabolism

A

Total sum of all chemical reactions in an organism.

18
Q

What is catabolic metabolism? What is anabolic metabolism?

A

Used to power synthesis ATP from ADP and phosphate.
Respiration.

Is powered by ATP when required in a chemical reaction

19
Q

What are endodontic reactions

A

Require energy (lower to higher energy arrangement)
Can not occur spontaneously.
Change in free energy is positive.
Most of the reactions are endergonic

20
Q

What is ATP

A

Short-term energy molecule.
Tens of millions made/used per second per cell.
Molecule of choice in cells.

21
Q

How is ATP bonded

A

Bonds between phosphate groups in nucleotide.
Triphosphates.
Relatively stable.

More energy released when bonds between our broken then is required by cell to initiate cleavage
HYDROLISYS

22
Q

What is work?

A

Anything that requires atoms to be moved around through cellular actions

23
Q

What our exergonic reactions

A

Release energy (higher to lower energy arrangements)
Spontaneously (once initiated)
Change in free energy is negative.

24
Q

What is Gibbs free energy

A

Measurement of the amount of useful energy that system continues to perform work.

Cellular level = major source is the arranging of atoms to form higher energy compounds to lower

25
Q

What is the kids free energy equation and what does it stand for

A

Free energy = change in enthalpy - temperature * change in entropy

🔼G = 🔼H - T🔼S

26
Q

What does the temperature have to be in for Gibbs free energy

A

Kelvin.

Add 273 to convert Celsius to Kelvin

27
Q

What is kinetic and potential energy

A
Kinetic = motion. 
Potential = stored. 

Both contribute to phenomena at all levels of organization in the universe. Both useful to organisms in different ways.

28
Q

What is the first law in cellular energetics

A

Matter and energy cannot be created nor destroyed.
Transformations are allowed.

Organisms energy processing systems is energy from the sun or chemical bonds used to undertake cellular work

29
Q

What is the second lot of cellular energetics

A

Any closed system will tend toward a state of maximum entropy or disorder

Portions of the universe can still function as an open system

Energy is used to decrease and open systems entropy

Decreasing their overall inch repeat increases entropy of their surroundings

30
Q

What is a closed system

A

Closed systems tend toward in absence of free energy.
Reach state of equilibrium of input and output.
Inevitably dull

31
Q

What is an open system

A

Do not reach equilibrium as long as processes of systems received inputs and produce outputs.
No inherent limit to complexity of open system provided there is enough input to allow for complex city.
Usually interesting.

Life is an open system

32
Q

Characteristics of an enzyme

A
Speed up chemical reactions
Must be favorable to catalyst
Does not change free energy
Does not change chemical equilibrium
Not consumed in a reaction
Highly specific