Cell Structure Flashcards
state the cell theory
- all cells are made up of pre-existing cells
- all living things are made up of one or more cells
- a cell is the smallest unit of life
state the structure of the nucleus
- spherical/ovoid structure, surrounded by a nuclear envelope that separes the nucleoplasm from the surrounding cytoplasm
- double-membrane bound, outer surface of the nuclear envelope is studded with ribosomes and continuous with the RER membrane
- nuclear pores on the nuclear envelope control the movement of substances into and out of the nucleus
- nucleoplasm contains nucleotides, chromatin, nucleolus and enzymes (proteins)
- nucleolus is a dense region in the nucleoplasm that is not membrane-bound; contains dna that codes for rRNA and is the location where large and small ribosomal subunits are synthesised
describe the functions of the nucleus
- contains genetic information in the form of chromatin (DNA associated with histone proteins)
- chromatin exists as heterochromatin (densely-stained, DNA not actively transcribed and tightly packed) and euchromatin (less densely-stained, DNA actively transcribed and less tightly-packed)
- directs protein synthesis: transcription: synthesising mRNA according to nucleotide sequence in DNA; translation: mRNA is used as a template for protein synthesis; nucleus controls all cell activities by regulating protein and enzyme synthesis
- nucleolus contains DNA that codes for the synthesis of rRNA, ribosomal proteins are imported from cytoplasm into nucleoplasm, large and small ribosomal subunits (consist of rRNA and ribosomal proteins) are synthesised in the nucleolus
- large and small ribosomal subunits combine to form a functional protein in the cytoplasm during translation
describe the structure of the RER
- interconnected, membrane-bound flattened sacs (cristenae)
- outer membrane of RER is continuous with outer membrane of nuclear envelope and is studded with ribosomes
- inner surface of membrane is embedded with enzymes involved in the post-translational chemical modification of proteins and folding of polypeptides into their native 3D conformation
- protein channels act as receptors that hold ribosomes in place
describe the structure of SER
- interconnected, membrane-bound tubules which lack ribosomes
- outer surface of membrane is continuous with RER membrane
- inner surface of membrane is embedded with enzymes involved in synthesis of lipids and steroids
describe the functions of RER
- ribosomes attached to RER synthesise secretory proteins/hydrolytic enzymes/membrane proteins
- cisternae provides suitable environmental conditions for the folding of polypeptides into their native 3D conformation and the post-translational chemical modification of proteins
- membrane proteins are inserted into the RER membrane, which become a part of the vesicle membrane and when these vesicles fuse with their destined membranes, these membrane proteins become embedded in their destined membranes
- polypeptides are transported to GA via transport vesicles to be secreted out of the cell
describe the functions of SER
- synthesis of lipids and steroids, phospholipid synthesis is important to replenish/form membranes, more phospholipids are required before cell division
- stores/releases calcium ions, impt for contraction of muscles
- contains enzymes involved in detoxification of chemicals and drugs: enzymes add hydroxyl group to these chemicals, making them more soluble and easier to remove from the body
- involved in carbohydrate metabolism in liver cells
state the general functions of ER
provide a large surface area for increased rate of reactions
* more ribosomes can attach to RER membrane for increased rate of protein synthesis, more enzymes for increased rate of PTCM in RER, increased rate of lipid and steroid synthesis
form an intracellular transport system to move materials from one part of the cell to another via ER lumen
describe the structure of GA
- stack of membrane-bound flattened sacs (cisternae)
- inner surface of membrane is embedded with enzymes involved in PTCM of lipids and proteins from ER
- transport vesicles from ER fuse with GA cis face, adding its membrane to that of GA and releasing contents into GA cisternae
- materials are processed as they move from cisternae to cisternae towards trans face
- secretory vesicles containing secretory molecules at trans face pinch off from cisternae of GA
- some vesicles move along microtubules towards cell surface membrane and release contents to exterior of cell
- other vesicles containing hydrolytic enzymes remain in the cell and become lysosomes
describe the functions of GA
involved in packaging, sorting and modifying of substances
* proteins and lipids from ER undergo PTCM to form their final products as they move from cisternae to cisternae
* final products are packaged into membrane-bound vesicles for transport to their eventual destinations
* secretory vesicles containing secretory molecues are transported along microtubules towards cell surface membrane to release their contents into the exterior
* vesicles containing hydrolytic enzymes circulate within the cytoplasm and become lysosomes
* vesicles containing membrane proteins are transported along microtubules towards CSM, fuse with CSM and proteins are embedded in membrane
* GA is thus responsible for formation of various types of vesicles: secretory vesicles and lysosomes
major site of carbohydrate synthesis
describe the structure of lysosomes
- membrane-bound vesicles containing hydrolytic enzymes that hydrolyse complex chemical compounds into simpler ones
- acidic pH (optimum pH for hydrolytic enzymes)
describe the formation of lysosomes
- hydrolytic enzymes synthesised by ribosomes attached to RER
- they enter the RER and are then transported to the GA
- at GA, modified and packaged into membrane-bound vesicles called lysosomes
- lysosomes circulate in cytoplasm
describe the functions of lysosomes
intracellular digestion
* lysosomes fuse with endocytic vesicles containing material taken into the cell via endocytosis
* hydrolytic enzymes released into this newly formed secondary vesicle where intracellular digestion takes place
* digested products absorbed into cytoplasm and assimilated while undigested material is excreted out of cell via exocytosis
cell autophagy
* worn-out/defunct organelles are enclosed in a membrane
* lysosomes fuse with these vesicles and release hydrolytic enzymes
* organelles broken down by hydrolytic enzymes, soluble products absorbed into cytoplasm where they may be used to form new organelles
cell autolysis
* lysosomal membrane ruptures, releasing hydrolytic enzymes into cytoplasm, which digest cell contents, killing it in the process
* occurs in injured/dying tissue during intended cell death (apoptosis) or unintended cell death (necrosis)
state the structures involved in the endomembrane system
nuclear envelope, RER, SER, GA, endocytic vesicles, transport vesicles, secretory vesicles, lysosomes
describe the structure of the chloroplast
- disk-shaped, biconcave, double-membrane bound
- stroma contains grana, each granum consists of a stack of flattened sacs (thylakoids) connected by tubes to adjacent grana
- stroma contains thylakoids, enzymes involved in Calvin cycle, 70S ribosomes, starch granules and circular DNA
- photosynthetic pigments (carotenoids and chlorophyll), electron carriers and ATP synthase are embedded in thylakoid membranes
describe the function of chloroplast
main site of photosynthesis
* thylakoid membranes increase surface area for more photosynthetic pigments, electron carriers and ATP synthase to be embedded, increased rate of light absorption = increased rate of light-dependent reactions
* stroma contains enzymes that catalyse light-independent reactions in photosynthesis (Calvin cycle)
* 70S ribosomes synthesise chloroplast proteins encoded by chloroplast DNA (members of electron transport chain and ATP synthase)
* circular DNA codes for synthesis of some chloroplast proteins (members of the electron transport chain and ATP synthase)
* starch granules store excess glucose in the form of starch, produced during photosynthesis; in absence of sunlight, starch is converted back into glucose by enzymes and transported to cytoplasm
describe the structure of mitochondria
- rod-shaped/cylindrical, double-membrane bound
- outer membrane forms a smooth wall and inner membrane is highly folded to form cristae, which project into a gel-like mitochondrial matrix
- electron carriers and ATP synthase is embedded in cristae, cristae increases surface area for increased rate of respiration
- mitochondrial matrix contains 70S ribosomes, circular DNA and enzymes involved in the Krebs Cycle
describe the functions of mitochondria
main site of aerobic respiration
* ATP synthase and electron carriers embedded in cristae involved in oxidative phosphorylation (ATP synthesis)
* enzymes in mitochondrial matrix are involved in Krebs cycle of respiration (final breakdown of organic molecules for release of energy)
* circular DNA contains genes which codes for some mitochondrial proteins (members of the electron transport chain and ATP synthase)
* 70S ribosomes synthesises some mitochondrial proteins encoded by mitochondrial DNA
* some heat energy is released during respiration
describe the advantages of having membrane-bound organelles in cells
physically separate chemical reactions, many of which are incompatible, by allowing the localisation of specific molecules into specific compartments
* each compartments performs a different function at the same time
* allows specialisation of cells as different compartments perform different function
* nucleus contains genetic material and nuclear envelope prevents reactions in cytoplasm from altering genetic material, regulates which proteins have access to genetic information and when (gene regulation)
* photosynthesis occurs in chloroplast while respiration occurs in mitochondrion
* lysosomes are acidic and contain hydrolytic enzymes which do not interfere with other processes in cytoplasm
separate different reactions by time
* molecules are produced in one organelle and subsequently used in other reaction sequences
* enhances efficiency of processes by determining sequence of reactions taking place
* excess sugars stored as starch in starch granules to be used later
* process of transcription and translation are separated
* insulin can be stored in cytoplasm and released from cell when needed instead of being synthesised from scratch
allow high concentrations of enzymes and molecules to accumulate in specific compartments through AT
* enhances efficiency of reactions bc high concentrations of substrates and enzymes increase chances of substrates and enzymes colliding in the right orientation for reaction to occur
each membrane provides a surface for attachment of proteins for specific function
* with larger SA, more proteins can attach to membrane
* large SA of RER for attachment of ribosomes for protein synthesis
* large SA of cristae in mitochondria for attachment of ATP synthase for ATP synthesis
* proteins can be attached to membrane in a specific order and orientation, this determines the sequence of reactions taking place
each compartment provides an optimum environment for specific reactions to occur
* enhances efficiency of reactions as certain biomolecules require specific conditions in order to maintain a specific 3D conformation
* acidic environment of lysosomes optimal for hydrolytic enzymes to function
describe the structure of ribosomes
- consist of a large and small ribosomal subunit, which combine to form a functional protein during translation
- made up of rRNA and ribosomal proteins
- ribosomal subunits synthesised at nucleoplasm, they exit nucleus via nuclear pores and carry out translation at RER/cytoplasm
describe the functions of ribosomes
- ribosomes attached to RER membrane synthesise secretory proteins/membrane proteins/hydrolytic enzymes
- polypeptides enter the RER lumen to be modified to form functional proteins
- proteins synthesised by free ribosomes are used within the cytoplasm/transported to other organelles (nucleus, mitochondria, chloroplasts)
- polyribosome: when many ribosomes attach to and translate the same mRNA molecule, improves efficiency of protein synthesis
describe the structure of centrioles
- in animal cells, centrioles are found in centrosomes while plant cells have centrosomes but do not have centrioles
- found in a region near the nucleus (centrosome)
- found as a pair, lie perpendicular to each other
- each centriole consists of a hollow tube, wall of each tube is made up of nine triplets of microtubules
describe the functions of centrioles
microtubule-organising centre, organises formation of meiotic and mitotic spindle during cell division
* spindle fibres assemble chromosomes at the metaphase plate during metaphase and separate the chromosomes during anaphase, facilitating the distribution of genetic material to daughter cells
give rise to basal bodies of cilia/flagella
state the structures always present in bacteria
peptidoglycan cell wall, cell surface membrane, bacterial chromosome, cytoplasm 70S ribosomes, food reserves
describe the structure and function of the cell wall in bacteria
- strong and rigid due to peptidoglycan (parallal polysaccharide molecules cross-linked at regular intervals by short amino acid chains, regular cross-linking confers high tensile strength)
- maintains shape and structure of bacterial cell
- helps anchor appendages, which originate in the cytoplasmic membrane and protrude through the cell wall to the exterior
- fully permeable to water/ions/small molecules/large enzymes/fragments of DNA
describe the structure and function of the cell surface membrane in bacteria
- selectively permeable, controls movement of substances into and out of the cells
- in some cells, infoldings of cell surface membrane forms specialised membranes that perform many of their metabolic functions (respiratory membranes)
describe the function of cytoplasm in bacteria
- cell growth, metabolism and replication are carried out here
- contains 70S ribosomes, bacterial chromosome, plasmids
describe the structure and function of a bacterial chromosome
- single, circular, double-stranded (DNA) molecule
- not bound by a nuclear envelope but is found in the nucleoid region (less densely stained than rest of cytoplasm)
- bacterial DNA associates with non-histone proteins and exists in a condensed supercoiled structure
- genes in bacterial genome are found in a continuous stretch of DNA, with little non-coding DNA between coding genes, bacterial genes contains mostly coding genes (extrons), with introns being much rarer than in eukaryotes;
- due to a lack of nuclear envelope, DNA is transcribed to form mRNA, mRNA is translated to form polypeptides before transcription is completed, transcription and translation occur concurrently
describe the structure of plasmids
- small, circular, double-stranded DNA molecules
- contains genes that provide some benefit to bacteria but are non-essential for survival
- separate from bacterial chromosome
- C plasmids contains genes conferring antibiotic resistance, codes for enzymes that inactivate antibiotics
- F plasmid contains genes coding for sex pillus, allow lateral transfer of F plasmid between bacteria (by conjugation)
describe the structure and function of ribosomes in bacteria
- 70S ribosomes scattered throughout cytoplasm, not bound to any organelles
- consist of a large and small ribosomal subunit, made up of rRNA and ribosomal proteins
- many ribosomes attach to and translate the same mRNA molecule: polyribosomes
describe the structure of the viral genome
- single-stranded/double-stranded, DNA/RNA (never both
- segmented into many molecules/a single molecule
- circular/linear