Cell Injury and Cell Death Flashcards

1
Q

3 Levels of Pathologist Certainty

A
  • Pathognomonic - most certain; finding is unique to specific disease
  • Diagnostic - finding is highly linked w/ specific disease
  • “Consisten with “ - finding may be associated w/ other diseases too but still helps rules out others
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2
Q

Types of Insults (7)

A
  • External - physical, chemical (pH, toxins), biological (viruses, bacteria, parasites)
  • Internal - energy deficits, genetic, metabolic, neoplasia
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3
Q

Stages of Cellular Response to Injury

A
  • Adaptation
    • 1st- Physio - corrective/ return to homeostasis
    • 2nd- Pathological - counterproductive change or side reactive
  • Injury (loss of function or damage)
    • 1st - reversible- you can repair the damage and regain function
    • 2nd- irreversible - too overwhelming or non-repairable
  • Cell Death
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4
Q

3 Types of Cell Death

A
  • Necrotic - overwhelming damage —> degradation —> debris released to surroundings (due to loss of membrane integrity)
  • Apoptosis - programmed cell death; regulatory process of enzymatic cell suicide; debris NOT released into surrounding
  • Necroptosis - regulated like apoptosis (use death receptors and genetically programmed intracellular signaling BUT does not activate caspases) BUT cellular degradation like necrosis (reduced mitochondrial production of ATP, inc generation of oxidative species, lysosomal membrane permeabilization and cell swelling/rupture)
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5
Q

Morphological Signs of Injury (2)

A
  • Hydropic Change - ion imbalance —> swelling of vesicular compartments b/c ions and water in cell
  • Fatty Change- cannot process lipids —> lipoproteins so accumulate fat droplets in cell
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6
Q

Atrophy & Hypertrophy

A
  • Atrophy - dec cell size
    - Condensed chromatin/less transcription, less cytoplasm volume/less rough ER protein synthesis, loss of apical specialization/ less phagocytosis
    - Caused by…nutrient insufficiency, less work demand, less trophic stim, etc
  • Hypertrophy - inc cell size
    - Open chromatin and larger nuclei/more transcription, greater cytoplasmic volume/more rough ER and protein synthesis, greater specialization of apical surface/more phagocytosis
    - Caused by…high work demand, hypertrophic stimulation, more nutrient supply - poss adipose tissue?**BOTH regulated by mTOR (protein kinase complex that is central to deciding whether cell size is maintained or inc/dec occurs - receives signals from multiple pathways then phosphorylates targets that directly affect transcription)
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7
Q

Hyperplasia

Metaplasia

A
  • Metaplasia - replacement of 1 cell type for another
    - Squamous metaplasia (epithelium becomes squamous - smokers)
    - Intestinal metaplasia (epithelium becomes mutinous columnar - protection from acid)
    - Mesenchymal metaplasia (ossification of ligaments)
  • Hyperplasia - inc # cells (proliferation of resident cells OR decreased regulation of cell death)
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8
Q

Hypoxia

Anoxia

Ischemia

Infarction

A
  • Hypoxia - decreased or limited O2 delivery
  • Anoxia - no O2 delivery (glycolysis can persist)
  • Ischemia - insufficient blood supply; so limited O2, no fuel and waste buildup
  • Infarction - when one of the above leads to a whole zone or region of cell death
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9
Q

What happens to ischemic cells?

A
  • Main result is a lack of energy/ATP AND lactic acid buildup so failure of things that use energy…
    • No membrane ion pumps …osmotic swelling
    • No transcription/translation …dec protein synthesis and loss of heterochromatin
    • Actin and myosin need ATP/GTP to remain polymerized …changes in cell shape and membrane blabbing
    • MOST IMPORTANT is Na/Ca exchanger (ATP dep) …inc intracellular Ca++ which has multiple effects…
      • Ca++ activated proteases (CALPAIN)
      • Ca++ activated nucleases
      • Ca++ activated lipase —> breakdown of membrane
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10
Q

Hypoxia Sensing System

A
  • If normal amount of O2…HIF1alpha has hydroxylated prolines - recognized by E3 of Von Hippel Lindau protein and targeted for degradation
  • If no O2…HIF1alpha is stabilized and transcription factor for genes needed for glycolysis (energy w/o O2) and VEGF for new caps and erythropoietin for RBC formation in bone marrow
    • VHL disease if mutation in VHL protein —> HIP1alpha always stable —> tumors w/ blood vessel proliferation
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11
Q

3 Reactive Oxygen Species + Protective Enzymes

A
  • 1- hydroxide radical - least stable/most reactive (does not have enzyme b/c normally gone before reacting w/ anything)
  • 2- Superoxide - very reactive and short half life (superoxide dismutase)
  • 3- hydrogen peroxide - least reactive/longest half-life (catalase OR glutathione peroxidase)
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12
Q

Where do reactive species come from?

A
  • Damaged mitochondria
    • Re-perfusion injuries - resupply O2 to area w/ damaged mitochondria (damaged by ischemia)—> reactive oxygen species
  • Released from inflammatory cells (NADPH Oxidase and myeloperoxidase)
  • Metabolic Oxidases (ex - CYP450s - oxidation reaction; prostaglandin synthetase)
  • Heavy metals (esp Cu and Fe)
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13
Q

What kind of damage do reactive oxygen species cause?

A
  • Free radical target the plasma membrane directly (unlike hypoxia)
  • Also oxidize cytoplasmic proteins, cause DNA mutations, create cross linking compounds, etc
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14
Q

Oxidative Stress Response System

A
  • Normally…E3 complex w/ KEAP1 binds and targets NRF2 for degradation
  • If reactive oxygen species…oxidizes sulfyhdryl groups of KEAP1 so it no longer binds NRF2 —> NRF2 moves to nucleus and acts as transcription factor for antioxidant genes and protective carcinogen metabolizing genes AND regulated heat shock transcription factor and stimulates it to inc transcription of chaperones
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15
Q

DNA Damage Response System

A
  • Dbl stranded DNA breaks are sensed by ATM (ataxia-telangiectasia mutated) protein complex
    - Recruits dbl strand repair enzymes, activates repair complexes (BRCA 1 and 2) and halts DNA replication/cell cycle progression (p53)
    - If not effective, ATM can also stimulate apoptotic cell death
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16
Q

PAMPs and DAMPs

A
  • PAMPs (pathogen-associated molecular pattern systems)
    • Includes bacterial wall components, protozoal flagella, bacterial DNA
    • Bind Toll-Like Receptors on cell surface
    • Bind inflammasomes in cytoplasm
  • DAMPs (damage-associated molecular pattern systems)
    • Includes products released from dead or dying cells (ATP, S100, HMB1)
    • Bind RAGE (receptors for advanced glycation end-products) on cell surfaces
  • DAMPs and PAMPs lead to…
    • Insult specific adaptive gene expression
    • Activate innate immune system (inflammation)
    • Activate cell death paths (apoptotic or necrotic)
17
Q

Heat Shock Path

A
  • unfolded proteins outcompete HSF for HSP90 in cytoplasm —> free HSF —> travels to nucleus to act as transcription factor for other heat shock proteins
    • Meanwhile, HSP90 binds denatured proteins so they do not aggregate and they can refold; if refolding fails then passed to UPS for degradation
18
Q

UPR

A

Unfolded Protein Response

- If ER is overloaded by inc protein synthesis the cell will…
    - Shut down synthesis of secretory proteins
    - Max activate ERAD
    - Inc ER chaperone capacity
    - Inc amount of ER and secretory protein biosynthetic machinery
  • Done via 3 component system; all normally bound to BiP in ER but when BiP is pre-occupied w/ unfolded protein overload they have other effects
    - 1- ATF 6 (transcription of more chaperones)
    - 2- PERK (dec mRNA translation)
    - 3- IRK-1 (inc transcription of chaperones and self but dec transcription of metabolic synthetic pathway genes AND alternate splicing to make more active form of HAC-1/XBP-1)
19
Q

UPS

A
  • Ubiquitin Proteasome System
    • Regulated protein degradation and turnover (not just for damaged proteins)
    • Ubiquitin - 76 AA protein; added sequentially to proteins to make polyubiquitin tag (degradation signal)
    • Proteosome - 19s catalytic subunit (proteases) and 6s regulatory subunit (recognizes/removes ubiquitin tage and unfolds protein)
  • Ubiquitinylation
    - E1- ubiquitin activating enzyme (ATP dep)
    - E2- ubiquitin conjugating enzyme
    - E3- ubiquitin ligase
    • Unfolded proteins can aggregate into hyaline inclusions that resist UPS
      • Eosinophilic (red) homogenous bodies in cytoplasm
20
Q

Autophagy

A

removal of own damaged organelles and proteins by lysosomes

  • Damaged organelles tagged w/ LC3 via APG cascade
    • Tagged organelles engulfed by autophagosomes (2 membranes)
    • Autophagosomes fuse w/ lysosome - inner membrane ruptured by lysosomal lipases and contents digested by acidic lysosomal lumen enzymes
    • Anything that cannot be digested to lipids or AAs remains in yellow/brown granules called lipofuscin
    • Can be bad if this is characteristic of cancer cells -prevent own demise
  • Microautophagy = direct engulfment f cytoplasmic material by lysosomal invaginations
    • Why do it? in response to starvation it gives essential nutrients and ATP
21
Q

Cellular Senescence

A

irreversible termination of replication capacity

- Telomere shortening
- DNA damage w/ low or little rapid signalingg
- Mitochondrial damage —> elevated free radicals
- Senescence associated secretory phenotypes (SASP) - global epigenetic reprogramming of gene expression —> chronic inflammatory factor production —> matrix remodeling —> tissue level signs of aging like wrinkles
22
Q

Clearance of Apoptotic Cells

A

enhanced by ATP and UTP released from apoptotic cells; phagocytes have ATP/UTP receptors and are then recruited

23
Q

Apoptosis Initiators, Executioners and Regulators

A
  • Initiators
    • Caspases that cleave other caspases to activate them (8 and 10), Caspases start as a pro domain and must be cleaved to be activated
  • Executioners
    • Caspases that carry out apoptosis by cleaving other molecules (3, 6, 7)
  • Regulators
    • Bcl2 Family - can have anti-apoptotic or pro-apoptotic effects
24
Q

Caspase Executioners Targets (4)

A
  • PARP (poly ADP ribose polymerase) - involved in DNA damage repair; caspases cleave them and remove this ability
  • I-CAD (inhibitor of caspase-activated DNAse) - once cleaved by caspase they released associated DNAse —> nucleus to cleave DNA b/c nucleosomes
  • Cell Cycle Proteins - Rb MDM2 (p53 regulator)
  • Structural Components - lamins in nucleus, actin, focal adhesion kinase
25
Q

Mechanism of Apoptosis Regulation

A
  • BHC domains interact w/ ea other
    - So anti can interact w/ pro BH123 to prevent their activation
    - Pro BH3-only are activated in response to stress/damage —> relieve inhibition of the anti and activate more of the pro BH123 on mitochondrial membranes
    - AKA pro BH123 activated directly by pro BH3-only or dissociation from anti
    • Pro BH123 form active complexes (death pores) on mitochondrial membranes—> leakage of apoptotic mediators like cytochrome c , apoptosis inducing factor and endonuclease G
26
Q

4 Steps of Extrinsic Caspase Activation

A
  • 1- Death receptors (Fas/TNFR) bind ligand
  • 2- Their cytoplasmic death domains interact w/ adaptor proteins (FADD/MORT)
  • 3- Adaptor proteins’ death effector domain forms complex w/ death defector domain of caspase 8 or 10 —> form death-inducing signaling complex (DISC)
  • 4- Once in DISC, caspase activated —> auto cleavage
27
Q

3 Steps of Intrinsic Caspase Activation

A
  • 1- DNA damage, ROS, damaged mito —> release of cytochrome c and other apoptotic factors from mitochondria
  • 2- Cytochrome c associates w/ Apaf-1. dATP and procaspase 9 forming apoptosome complex —> cleavage and activation of caspase 9
  • 3- Caspase 9 cleaves/activated caspase 3
28
Q

How are the intrinsic and extrinsic caspase activation paths linked?

A

Extrinsic and intrinsic are linked by caspase 8: activated by extrinsic path then cleaves/inactivaites regulators of cytochrome c release from mitochondria (intrinsic)