Cancer Biology Flashcards
How common is cancer?
-Nearly 1 in 2 Canadians get it
-49% lifetime risk for men
-45% lifetime risk for women
-25% who develop cancer will die of it
Cancer is a disease of the
-Cell
-While cancer is typically referred to by the type of tissue it originated in (breast cancer, lung cancer)
-When looked at more scientifically cancer is fundamentally a disease of the cell itself
Cancer Cells are Defined by two Heritable Properties:
- Autonomy
- Anaplasia
-To understand what these terms mean got to understand - Cell proliferation
- cell differentiation
Cell Proliferation
-Programmed generation of new daughter cells divided from a parent cell in the boys
-Under the control of genes
-A regulated balance of cell proliferation and cell death is needed to maintain body homeostasis
Examples of Cell Proliferation
-Every day thousands of skin cells are sloughed off and replaced by new cells generated in the stratum basale
-After drinking a lot of alcohol your liver regenerates it’s damaged and destroyed hepatocytes using that same form of cell division
Types of Cell Proliferation
Mitosis
Meiosis
Mitosis
-Each cell ends up with two copies of a chromosome
-How the majority of the body undergoes cell proliferation
-46 chromosomes in the parent cell should result in 46 chromosomes in the two daughter cells
-Highly regulated process with multiple checkpoints
-Dependent on a variety of factors such as growth factors or hormones and signals from neighbouring cells
Meiosis
-Each cell only has one copy of each chromosome
-46 chromosomes (23 pairs) in a normal cell becomes 23 total chromosomes with one copy each in the four new cells after meiosis
Autonomy
-Altered cellular proliferation
-The loss of regulated balance of cell division may result in over proliferation and crowding of cells
-Cancerous cells exhibit excessive cellular proliferation
-They grow and reproduce uncontrollably
-They are said to be autonomous
If a cell begins to undergo excessive mitosis or meiosis when not needed…
-then this can cause significant dysfunction of the tissue those new cells reside in
When a cell becomes cancerous it …
-Loses the ability to stop the mitotic cycle and begin to reproduce uncontrollably disregarding signalling from neighbouring cells
-Thus they are termed autonomous
A normal cell divides only when..
-Needed and only for as long as needed
-A cancerous cell no longer follows those rules and begins to reproduce far more than Is necessary to repair an injury
Cell Differentiation
-The orderly process of cellular maturation to achieve a specific function
-A regulated balance of undifferentiated and differentiated cells is needed to maintain body homeostasis
Cell differentiation under control of:
-Genes
-Growth factor
-Nutrients
-Stimulation from the external environment
Second characteristic of cancer cells
-Anaplasia
-Described as uncontrolled cell differentiation
When a stem cell matures..
-It differentiates from a pluripotent cell (a cell which can mature into a wide variety of different mature cells), Into a unipotent (it can only have one type of mature cell)
-This differentiation and maturation is under the control of all 4 factors
Cell differentiation control: Certain Genes
-Which are turned on or off during maturation of a cell
Cell differentiation control: Growth factors
Hormones such as HGH (human growth hormone), estrogen, testosterone, etc
Cell differentiation control: Nutrients
Some cells require specific nutrients in order to differentiate into their proper, mature forms
-Immature T cells for instance require amino acid glutamine to differentiate into CD4+ T helper cells
Cell Differentiation control: Stimulation from the external environment
-If you cut yourself, you stimulate production of new skin cells to repair the wound
Undifferentiated Cells
-Can mature into any number of mature cells
-Thus they are flexible and adaptable to whatever the tissue they are differentiating in requires
Differentiated Cells
-Have matured into a single type of cell
-Can not undifferentiate
-Eg. A differentiated cardiomyocyte for instance will not undifferentiate into an immature cell or spontaneously become a renal cell instead
Anaplasia
-Altered cellular differentiation
-The loss of regulated differentiation renders the cell incapable of carrying out its designated function
-Cancer cells = this, they are too busy replicating that it often doesn’t mature enough to do it’s designated job
Cancerous cells exhibit a loss of
-Cellular differentiation
-They lose their ability to carry out their specific functions and do not die when expected
-They are said to be anaplastic
Eg Anaplasia
-If a hepatocyte in your liver becomes cancerous and loses differentiation then it will no longer be able to preform the metabolic function of a hepatocyte = too busy replicating cannot mature to do its job
Not following the rules of differentiation =
Cancerous cells which have lost differentiation are unable to function as their differentiated, normal cells would
-Mature cells effectively act like immature cells
Neoplasm =
Autonomy and Anaplasia
-When a cell has lost control of its proliferation and its differentiation it is said to be autonomous and anaplastic and can now be considered as a potentially cancerous tumour cell
Difference between a tumour and a cancer ?
-Tumor: originally referred to as any swelling; now generally reserved for a new growth (neoplasm)
-Two types:
Benign, Malignant
-Cancer: a malignant neoplasm
so all cancers are tumours, but not all tumours are cancers
The Root Cause of Cancer is:
DNA Damage
-Cancer is a disease of the cell where the cell has become autonomous and anaplastic = damage to the DNA of the cell in question
-This damage is called DNA mutation
Mutations that lead to cancer are characterized as
Carcinogenic
Transcription/Translation
-Genetic information is stored as genes in our double stranded DNA, which is transcribed into a single stranded mRNA via an enzyme called RNA polymerase
-The mRNA then leaves the nucleus, enters the cytosol and is used as a template for the ribosome to generate a protein from individual amino acid molecules
Each Gene in the DNA begins with
-The 3 base start sequence “ATG”
-And when mRNA is made the RNA polymerase copies that into the sequence AUG
-Thyamine is replaced by uracil in RNA
-Every subsequent series of 3 bases of mRNA codes for a different amino acid
-These sequences of 3 mRNA bases are known as RNA codons
The shape and function of the protein is dictated by
-the sequence of amino acids which in turn was determined by the sequence of RNA codons read by the ribosome
RNA codons read by
-The ribosome
-The ribosome aligns the mRNA by looking for the AUG start codon (codes of methionine amino acid)
-Then starts adding other amino acids together based on the next 3 mRNA bases (codon)
Eg. bases
-If next 3 bases is UUA then ribosome will add a leucine amino acid
-If it’s AGU the ribosome will add a serine
-In some cases 3 or 4 codons can call for the same amino acid
How does the ribosome know when to stop and release the new chain of amino acids ?
It reads a UGA sequence, which is the stop codon
DNA Point Mutations
-DNA is miscoded frequently during DNA replication
-DNA repair genes which can be thought of as “spellcheckers” for “misspelled” DNA, usually repair erroneous sequences
Example DNA repair genes
-If DNA base sequence should AAA but is accidentally copied by DNA polymerase as CAA then DNA repair proteins correct this back to AAA by comparing it to complimentary DNA strand
If DNA repair gene is damaged and made defective..
-Then mutations in the DNA of other genes may go uncorrected and begin to build up
-Proteins made from the RNA (as a result of mutant DNA) may have incorrect amino acid sequences and may not fold or function properly
If enough critical cellular proteins cannot function properly..
-Cancer is often the result
-Eg. Xeroderma pigmentosa, an inherited disease with a predisposition to development of skin cancers, is caused by a faulty DNA repair apparatus that allows defective DNA to remain mutant
What can a mutation do (positive)
-In many cases they may do nothing at all
-For instance if the RNA sequence called for in the DNA is CUA but changes to CUG then both still code for the amino acid leucine
-Even though the sequence has changed, the resultant protein is still the same and nothing happens to the cell
What can a mutation do (negative)
-in many cases erroneous DNA mutations can have an effect
-if the RNA sequence called for in the DNA is UGU but changes into UGA, the amino acid called for goes from a cysteine to a “stop codon” which signals to the ribosome that this is the end of the protein
DNA repair enzyme P53 mutation
-If DNA repair enzyme such as P53 has a mutation in it which causes a premature stop codon then when the P53 protein won’t be made at its normal, full, amino acid length and may not function anymore
Consequences of DNA Mutation
-Produces abnormal mRNA
-results in defects carried over into translation
-interfere with proper protein synthesis
-suppress transcription (DNA—>RNA)
-Generation of abnormal/misfolded proteins
DNA Mutation and Mitosis Control
-Some proteins involved in controlling the cell cycle (mitosis)
-If DNA mutations of these proteins = may not function properly or be made at all
-If those proteins are involved in preventing the cell from going from G1 phase to S phase of mitosis, then that mitosis checkpoint may no longer function
RB protein
-Checkpoint protein frequently mutated in cancer cells
If cell looses enough of these checkpoints
-Then it loses control of the cell cycle
-has become autonomous
G1 phase
The cell grows and prepares to synthesize DNA
S phase
-Synthesis phase, cell copies it’s DNA
G2 phase
Cell prepares to divide
M phase
Or mitosis
The cell divides
Checkpoints
G1 checkpoint (stops it from progressing to S phase)
G2 checkpoint (stops from progressing to M phase)
M checkpoint (stops from entering M)
The human genome is over ___ nucleotides
3.2 billion
Base Human Mutation Rate
-Actual mutation rate is about 1 mutation in ever 10 billion nucleotides (even after accounting for DNA repair mechanisms)
-Result is about 1 mutation for every 3 replications of the entire genome
-Why Metaplasia/dysplasia can result in Anaplasia/autonomy
How do these mutations happen?
-DNA is mutated every time a cell goes through 3 rounds of mitosis because of mistakes made by our DNA polymerase enzyme
DNA Polymerase Enzyme
-Enzyme that does check for errors when replicating DNA
-occasionally one slips past
-may not matter much for neurons which rarely ever replicate
-but matters for cells which may be forced to replicate frequently such as epidermal cells
-this alone may introduce many harmful mutations over the course of a patients life
Mutations and stressing a cell
-Stressing a cell to the point of triggering Metaplasia and then dysplasia requires a cell to replicate many more times than it normally would in a healthy patient
-= cells more likely to become cancerous than others
Carcinogens
-Any substance, radionuclide, or radiation that is an agent directly involved in causing cancer
-Any agent capable of causing genetic mutation
Some Carcinogens and the Cancers they Cause
-Sunlight (UV radiation); skin cancer
-Inhalation carcinogens (cigarette smoke); lung cancer
-Excretory carcinogens (industrial chemicals); bladder cancer
-Human Pap (unprotected sex); cervical cancer
-Contact carcinogens; skin cancer
UV radiation
-UV radiation in sunlight is capable of altering DNA sequences and thus altering the final proteins made from those sequences
-Why UV radiation is linked to skin cancer
Cigarette smoke
-Contains many chemicals which have been show to be carcinogenic
-Benzene for instance can become benzene oxide in the cell and bind to DNA thus damaging it During DNA replication
HPV
-intentionally degrades DNA repair enzymes like P53 as well at mitosis checkpoint proteins such as RB in order for virus to increase the infected cells mitosis and thus it’s replication and spread
Examples contact carcinogens
-ethidium bromide, arsenic
-been found to bind to DNA and affect its ability to properly replicate triggering mutations
The origins of skin cancer
-UV radiation at a wavelength 254.7nm can damage DNA
-It can cause cross-linking of the pyramidine based (thyamine and cytosine) neighbouring each other where the UV photon strikes the chemical bond
-In many cases DNA repair enzymes will detect these mutations and repair this cross linking causing no problems and no increased risk of cancer
But what happens if cross-link is in the DNA encoding for that DNA repair enzyme, or HPV has damaged that DNA repair enzyme ?
-Now suddenly these mutations can build up
-If they build up sufficiently to damage the proteins involved in cell proliferation and cell differentiation then the result may be malignant melanoma, a common form of skin cancer
What in alcohol causes cancer?
Aldehydes
-Can directly damage DNA
Genetic Predisposition to Cancer
-A small % of cancer patients have an inherited mutation in their germ cells that predisposes them to development of certain types of cancers
BRCA1
-BReast CAncer 1 gene
-Most widely known genetic predisposition to cancer
-Normal BRCA1 is a gene which codes for DNA repair protein
-A mutated version of BRCA1 gene increases the chance of DNA mutations building up and encourages, but does not guarantee the development of breast and ovarian cancer in women
Genetic Influence of Cancer Examples
-Non-smoking relatives of lung cancer patients develop lung cancer with a greater frequently
-Children who inherit a defective copy of the retinoblastoma gene are almost certain to develop retinoblastoma = malignant tumour of the retina
Carcinogenesis
-multistep process
-Cancer pathogenesis describes the process by which a mutated cell proliferates into an undifferentiated population of cells capable of metastasis
-no single mutation of any gene type is sufficient to produce a neoplasm (tumour), arises from multiple mutations
The average breast or colon cancer has __ different mutations
90
Cells become cancerous due to a cycle of repeated …
Injury and mutation
-Eg, smoking: one cigarette isn’t enough, one pack for 35 years is
Monoclonal Origin Theory
-Cancer is thought to originate from a single mutated cell
-In most/all cases, cancer begin with mutations developing in several genes in a single cell, eventually culminating in that cell becoming autonomous and analplastic
Mutations that affect ___ genes can lead to cancer r
Regulatory
Most mutations are
Spontaneous alterations in DNA replication
Majority of mutations …
-Have no consequences
-Many cells will develop many mutations throughout the life of the person and most will be completely harmless
-It requires just a single cell to have enough mutations built up to damage the cell cycles “stop” and “go” protein checkpoints, DNA repair enzyme, apoptosis triggering proteins and growth inhibitors to result in cancer
Genes that can cause cancer when altered
-Mutator genes
-Oncogenes
-Tumour suppressor genes
Mutator Gene
-Code for proteins that repair mutated DNA
Oncogenes
-Code for proteins involved in cell growth
Tumour suppressor genes
-Code for proteins that prohibit over proliferation of cells and regulate apoptosis
Mutant genes associated with cancer are first discover and named because
-They are associated with a particular cancer
-Name give to the gene usually is related to the abnormal (defective/cancer causing) form of the gene not the normal gene or it’s usual function
-Often leads to the mistaken assumption that the abnormal gene is the only one that exists
-Eg. BRCA gene associated with breast cancer is named for the cancer with which it is associated, even though it’s purpose is to repair DNA and not mutate it to cause cancer