CANCER 2 - Animal models & melanoma Flashcards

1
Q

What are the most common mutations seen in melanoma?

A

Ptc inhibitor mutations

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2
Q

Risk factors to melanoma?

A

Age, gender (more common in males), skin tone and SUN BURN

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3
Q

What are some common mutations seen in melanoma?

A
  • Mutations in DNA repair genes
  • Melanocortin receptor - mutation = ginger hair
  • CDKN2A gene (p16/p14 are the protein products which cause apoptosis of cells upon UV damage)
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4
Q

What is TERT and how is is relevant to melanoma?

A

TERT = gene which codes for protein which maintains the integrity of telomeres & cell survival
Mutations in this gene can occur and are rare.

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5
Q

Common genes with EARLY MUTATIONS

A

TERT, CDKN2A, SW1/SNF

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6
Q

Common genes with LATE MUTATIONS

A

p53, pTEN

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7
Q

How are the MAPK and Ras pathways relevant

A

Mutations in MAPK genes linked to initiation of melanoma

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8
Q

Ras and BRAF — why important?

A

75% of mutations seen in melanoma linked to the BRAF but this doesnt always lead to tumours

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9
Q

Advantages of using: yeast, drosophila/c.elegans, fish and mice

A

Yeast - good for observing cell cycle machinery
Mice - precise genetics used, closer to human as mammalian
FIsh - large scale, optic clarity, useful in drugs screens
Drosophila/c.elegans - look at signalling pathways such as Hh and Wnt, can look at upstream signalling pathways

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10
Q

THE NUDE MOUSE - what is it, advs and disadvs?

A

Mouse created with a defective immune system and mutations in the fox1 gene. Can use to create XENOTRANSPLANTS (transplant the mouse with human tumour
+ good model for human disease
- tumours not always transplanted and grown in the right location, the model is immunocompromised so transplants often don’t work

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11
Q

How are mouse genetically modified models useful? (Use of Ras in mouse models)

A

Can create tumours by knocking down CDK2NA, creating loss of PTEN (tumour suppressor) and also hitting the mouse with UV , which will lead to activated Ras in melanocyte cells.
This will be specific to MELANOCYTES ONLY

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12
Q

TyrCre-ERT2;Brafca+,PTEN(lox/lox)

What is this - explain the elements of the mouse model and outline what it allows us to do

A

PTEN is loxed so will be cut out upon injection of tamoxifen (tyr)
Braf = cre activated form of BRAF
ERT2 = melanocyte-specific promoter
Cre mouse!!!

When tamoxifen is injected, PTEN becomes inactivated and BRAF activated IN MELANOCYTES ONLY – this allows tumours to be created!

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13
Q

Example of research - BRAF inhibitors and RG7204

A

BRAF inhibitors mutated (BRAF6000E) – then treated with RG7204 - mutants are sensitive to RG7204 but only in the presence of BRAF6000E mutation

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14
Q

How was the nude mouse used in the testing of RG7204?

A

3 melanoma cell lines used from nude mice. 3 lines needed ars different mutations present in different lines.

RG7204 blocked tumour growth in the model very well

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15
Q

What problem was encountered with RG7204?

A

Cells became resistant to the inhibitor

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16
Q

What new method is causing zebrafish to become increasingly popular

A

CRISPR/Cas9 system

17
Q

Why was a zebrafish screen carried out (mitfa:brafV6000E transgenic line)

A
  • mitfa:braf6000E transgenic line created - mitfa is a melanoctye specific promoter and braf6000E is a melnoma-inducing oncogene
  • melanomas induced in fish ONLY WHEN P53(-/-) PRESENT
  • Melanomas identified to have NEURAL CREST PROGENITOR SIGNATURE
18
Q

Outline procedure and outcome of the drugs screen

A
  • 2,000 compounds tested which inhbit CRESTIN (a neural progenitor marker)
  • DHODH identified to inhibit CRESTIN
  • A771726 analogue of Lethlunamide tested futher - (similar compound to DHODH) at the same time as PLX4720 —»> Lethlunamide and PLX4720 in combination impacted tumour growth!!!!
19
Q

Features of BRAF

A

cooperates with OTHER GENETIC PATHWAYS
Activated in 60% of melanomas
Gene found at Large region in chromosome 1

20
Q

Features of mitfa - how is it used in investigation of cancers in fish - what was shown with regards to SETDB1?

A
  • Expression plasmid encoding mitfa is injected into cells.
  • There have been different expression plasmids created which target DIFFERENT CANDIDATE ENHANCERS FOR TUMOUR GROWTH and see which are most effected
  • SETDB1 caused a decrease in melanoma free cell survival – could this be a potential therapeutic target?
21
Q

What is SETDB1?

A
  • histone methyl transferase enzyme

- amplified in melanoma

22
Q

what is shown in the mitfa:braf(V6000E) which also had knocked down p53 (-/-)

A

When mitfa removed, FISH WERE NORMAL