Biology Honors MIDTERM Flashcards

1
Q

Regulation

A

The nervous system; runs in the background (ie. blinking, flinching); helps maintain homestasis

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2
Q

Growth

A

Growth in cell size or cell mumber

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3
Q

Respiration

A

Release chemical energy in nutrients to power up our life functions

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4
Q

Excretion

A

Waste from chemical reactions (pee); NOT poop

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5
Q

Nutrition

A

The process of obtaining food necessary for health and growth; ingestion, digestion, egestion

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6
Q

Synthesis

A

Make a large thing from many small things (making a bridge)

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7
Q

Assimilation

A

How a living organism incorporates complex substances/molecules (building a brick house)

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8
Q

Transport

A

Circulation and absorption of materials into cell

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9
Q

Homeostasis

A

Keeping your body constant inspite of external changes (body shivering).

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9
Q

autotrophs

A

creates their own food/glucose EX. PLANTS

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10
Q

heterotrophs

A

Eats other things to get glucose

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11
Q

Anaerobic

A

Don’t need oxygen to do respiration/function (ex. bacteria)

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12
Q

Aerobic

A

Need oxygen to do respiration/function (ex. humans & plants)

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13
Q

Ingestion

A

Taking food in your body (mouth)

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14
Q

Digestion

A

To chew the food

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15
Q

Egestion

A

You poop it out

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16
Q

Theory

A

The established explanation given for many different observations seen by researches (like the germ theory)

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17
Q

Law

A

Accepted at face value (no proof needed) – like the law of gravity

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18
Q

Law

A

Accepted at face value (no proof needed) – like the law of gravity

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19
Q

Chromatography

A

Separation into components based on solubility in solvent

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20
Q

Spectophotometry

A

Use light absorbed to determine the concentration of substances

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21
Q

Electrophoresis

A

Separate mixtures based upon size and charge

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22
Q

Tissue culture

A

Growing human cells or any cells in a lab

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23
Q

Microdissection

A

Has the ability to dissect something as small as a cell

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24
Recombinant DNA
DNA that has been altered
25
Transgenic Organisms
Bacterial thing; gives animal genes that they never had
26
Matter
Anything that takes up space and has weight
27
Atom
Smallest unit of matter
28
Isotopes
Same atomic number but vary in mass; atomic number = protons which = electrons
29
Elements
Substance made of one type of atom
30
Radioactive Isotopes
Unstable nucleus; emits charged particles & radiation; used as biological tracers
31
Electron orbitals
Valence energy (inner perfect = 2)
32
Outermost shell
Perfect number
33
Compound
The union of elements that connected via covalent bonds
34
Electrostatic Interaction
Opposites are attracted to each other (hydrogen bonds)
35
Diatomic Molecule
Composed of two atoms of the same element
36
Single dash; double dash
Single bond; double bond (covalent bond)
37
Chemical formula
C6H12O6
38
Chemical reactions
When compounds interact, new compounds are formed (NEED WATERR!!!! because you need a solvent)
39
Suspension
No dissolving seen; mixture separates upon standing (sand in the pool); add two things to each other and they will separate b/c of time)
40
Law of Conservation of Matter
Matter cannot be created or destroyed
41
Mixtures
Substances physically mixed with no new chemical bonds formed; all members retain their usual properties
42
Liquid mixtures
Solution
43
Solutions
Solvent and Solute: Salt and water; Sugar and water; Sugar and tea; Hot choco. and milk
44
Solvent
Dissolves solute (water)
45
Solute
Dissolves in solvent (liquid, solid, or gas)
46
Colloidal Dispersion
Particles are too light to remain suspended (ex. milk, cream, & carbon).
47
Acids
Sour taste; in solution, releases H+ (Hydrogen) ions; HCI ------> H+ + CI- BLUE TO RED
48
Bases
Slippery feel; in solution, releases OH- (Hydroxide); NaOH -----> Na+ + OH-; RED TO BLUE
49
Neutralization reactions
Acid + Base ---> Salt and water
50
pH
The negative log in concentration; the lower the #, the more acidic; the higher the #, the more basic
51
Organic
Substance/molecule having carbon and hyrdogen
52
Organic Compounds
Glucose (C6H12O6), CH4 (Methane), CH3CH2OH (Ethanol, Alcohol)
53
Inorganic Compounds
H20, CO2, H2SO4, NaCI
54
Cohesion
The ability of water to stick to each other (water is attracted to each other because of H bonds...ex. water drop shape and surface tension)
55
Adhesion
Water molecules are attracted to substances other than water (sticks to other things...ex. capillary action)
56
Classes of organic compounds
Carbohydrates, Lipids, Proteins, and Nucleic Acids
57
Carbohydrates
C,H,O; H:O ration = 2:1; monomer = monosaccharides (simle sugar); the energy role in life
58
monosaccharides
Glucose, fructose & galactose; some molecular formula (C6H12O8) but arranged differently (ISOMER)
59
Isomer
In which two or more organic compounds have the same molecular formula but different structures
60
Disaccharides
A double sugar; Maltose, Sucrose & Lactose
61
Maltose
Composed of 2 glucose connected by an o-bridge
62
Sucrose
Composed of glucose and fructose + connected by an o-bridge
63
Lactose
Composed of glucose and galactose (milk, sugar) and is connected by an o-bridge
64
Polysaccharides
Many (>20) simple sugars connected (polymer); starch, cellouse, chitin, & glycogen
65
Starch Cellouse Chitin
Potato + Corn starch Cell wall in plant Exo-skeleton in bugs
66
Glycogen
"animal starch"; how we store our polysaccharides; our cells utilize glucose to create energy, yet, our cells warehouse that glucose in Glycogen
67
Maltose Chemical Form.
C12H22011 (not double because we lost one H2O molecule via o-bridge)
68
Dehydration Synthesis
Lose water to build something bigger; how we connect monomers
69
O-bridge
Glycosidic linkage (everytime monosacccharides are formed, a water molecule is formed)
70
Hydrolysis
Breaking something apart by using water (how we break apart polymers)
71
Lipids
C,H,O; H:O ratio MUCH greater than 2:1; fats, oils, waxes, steroids& terpenes
72
Glycerol
Monomer of lipids BUT only went connected to other monomers; 3 hydro-carbons with 3 hydroxyl groups
73
Fatty Acids
Monomer of lipids; chain of hydro-carbons w/ a carboxyl group @ the end; saturated and unsaturated
74
Lipid Triglyceride
When formed, we lose 3 molecules of water; composed of 3 fatty acids and 1 glycerol
75
Phospholipid
Two fatty acids, a glycerol unit with a phosphate group (polymer)
76
Saturated fats
Butter, lard, whole milk, other animal products; rich diet leads to increased cholesterol, heart disease and arteriosclerosis
77
Cholesterol
Necessary to live, yet, too much - bad
78
Hydrogenated Fats
Add hydrogen to liquid; unsaturated fats to make them solid saturated fats
79
Electronegativity
The tendency of an atom to attract electrons towards itself
80
Phosphate
One phosphorous & 4 O atoms
81
Proteins
C,H,O,N; Makes up cartilage, bone, muscles, hormones, antibodies & enzymes; NEED to function
82
Amino Acids and Peptides
Monomer of protein (same thing)
83
Carboxyl Group
Combination of two functional groups attached to a single carbon atom (COOH)
84
Peptide bond
N to Carbon
85
Polypeptide
Chain of amino acids
86
Primary Structure
Peptides connected by peptide bonds
87
Secondary structure
Alpha-Helix and/or Beta pleated sheet strucutre held by Hydrogen Bonds
88
Tertiary Structure
Give overall shape of the protein as globular or fibrous held together by hydrogen bonds, hydrophobic/hydrophilic, ionic bonds, disulfide bonds
89
Quaternary Structure
Multiple polypeptides chains connected
90
Enzymes
Type of proteins that act as a biological catalysts (very specific)
91
Nucleic Acids
C,H,O,N; Genetic Material
92
Nucleotide
Monomer of Nucleic Acids: DNA and RNA
93
DNA
Deoxyribonucleic Acid, genetic material, from parent to child: TAGC
94
RNA
Ribonucleic Acid, rough copy of RNA (UAGC)
95
Cellular Respiration
the release of energy stored in food; the released energy is stored in molecules of ATP
96
Aerobic Cellular Respiration
Glucose + oxygen gas --> carbon + water + ATP (energy); eukaryotes
97
Anaerobic Cellular Respiration
Glucose ---> Lactic Acid or Ethyl Alcohol & CO2 + 2 ATP; Prokaryotes
98
Oxidation
A molecule loses electrons or H Atoms (how you pull apart a glucose molecule)
99
Reduction
A molecule gains electrons or H atoms (how you pull apart a glucose molecule)
100
Isomerases
Enzyme that converts a molecule into an isomer
101
Dehydrogenases and Hydrogenes
Enzymes that transfer Hs
102
Kinases and Phosphatases
Transfer phosphate groups
103
Facultative Anaerobes
Switch hitters (does both respirations depending if O is present)
104
Obligate or strict Anaerobes
Only do anaerobic respiration & will die in the presence of O
105
Photosynthesis
Capture sunlight energy and convert it into the chemical energy stored in glucose
106
Photons
Bundles of light
107
Light-Dependent Reactions
Help in Grana; need sunlight or Red or Blue light
108
Light-Independent Reactions
Calvin cycle; held in Strama; Can occur day or night goes around 6 times to make glucose
109
Diffusion
Molecules move from a region of high concentration to a region of lower concentration until equilibrium; no energy needed; need a concentration gradient
110
Facilitated Diffusion
Passive-no energy needed but required transport proteins; need gradient
111
Osmosis
Diffusion of water; goes from high water concentration to low water concentration OR low solute concentration to high solute concentration
112
Hypertonic
Contains more solute than something else water is hypertonic to the organisms living in it
113
Hypotonic
Contains less solute than something else
114
Isotonic
Contains the same amount of solute as something else
115
Plant Cells in different environments
Flaccid --> Floppy Turgid --> swollen and hard Shriveled --> Kills the plant
116
Active Transport
Requires Energy (ie. Need ATPs) Move materials against a concentration gradient
117
Endocytosis
Transporting things into a cell; Pinocytosis and Phagocytosis
118
Pinocytosis
Taking small amounts of things into a cell via vesicles
119
Phagocytosis
Taking large solid materials into a cell via food vacuoles
120
Chromosomes
One molecule of DNAA wrapped around Histones
121
Sister chromatids
Doubled chromosomes
122
Chromatin
DNA
123
Cancer
No density dependent Inhibitation; don't respond to normal "off signals", uncontrolled replication of cells
124
Oncogenes
"Gas"; code for proteins that enhance cell division
125
Tumor suppressor Genes
"Brakes"; code for proteins that inhibit cell division
126
Autosomes
Chromosomes that have info. on how to build a body
127
Homologous Chromosomes
Chromosomes that look similar & have the same genetic info (genes for eye color)
128
Diploid
Has a mom & dad version of each chromosome: 2n; Most body cells
129
Haploid
Has either a mom or dad chromosome; n; Gametes (Sperm and egg)
130
Law of Segregation
Alleles segregate or separate during meiosis and can come together in different pairings
131
Law of Independent Assortment
Traits are usually inherited independent of each other -- linked genes are an exception
132
Dihybrid
9:3:3:1
133
Monohybrid
3:1
134
Schleiden
All plants are made of cells
135
Schwann
All animals are made of cells
136
Virchow
Cells can only come from preexisting cells
137
Nucleus
Cellular control center Surrounded by a nuclear membrane Holds Nucleolus (Nucleoli) = have a role in ribosome synthesis Holds Nucleoplasm has DNA
138
Rough Endoplasmic Reticulum
Network of chemicals for transport of proteins contains ribosomes proteins fold here
139
Ribosomes
synthesize proteins large and small subunits
140
DNA doesn't leave nucleus...
make a rough copy of segment of blueprints (mRNA) mRNA leaves nucleus through nuclear pore mRNA binds Free or ER ribosome Ribosome makes protein
141
the protein folds in...
Endoplasmic Reticulum
142
Smooth ER
Important in lipid synthesis for membranes
143
How does the protein get to the Golgi Apparatus?
Transport Vesicle
144
Golgi Apparatus
Stack of flat sacs Processing, sorting, packaging, shipping, modifying proteins with carbs or lipids
145
Cytoplasm
(not an organelle) Mostly water Place where most organelles are found Place for chemical for chemical reactions
146
Mitochondria
Performs cellular respiration Converts sugar into energy "Powerhouse" of cell HAS OWN DNA AND CAN REPLICATE INDEPENDENTLY
147
Lysosome
Garbage can of the cell Can be involved with defense Can be involved with development
148
Peroxisomes
Similar to lysosomes Break down substances Produces Hydrogen peroxide as a waste product but then breaks it down
149
Autophagy
"Pac-men" who gobble cytoplasm with worn our proteins and organelles and brings it to the lysosome Defense role against bacteria and viruses
150
Apoptosis
Suicidal Cells
151
Vacuoles
Small but numerous Mainly in plants and protists In animal cells Storage functions (pigments, food, toxins, wastes) Digestive functions Water balance
152
Food Vacuoles
Stomach of the celll
153
Central Vacuole
(in plant cells) storage water balance
153
Central Vacuole
(in plant cells) storage water balance
154
microskeleton
Microtubules Intermediate Filaments Microfilaments
155
Microtubules
Provides cell shape Organelle anchors and molecular motors Make up centrioles Movement of cilia and flagella
156
Intermediate Filaments
Anchor Chromatin Anchorage and Reinforcement Rods inside Nucleus
157
Centrioles
Involved with cellular division 2 barrel like structures Located in centrosome region Made of Microtubules Not found in plant cells 9 Triplet pattern
158
Plastids
Found only in photosynthetic cells) Leucoplasts=storage site for nutrients Chromoplasts=pigment storage sites Ex. Chloroplast filled with chlorophyll
159
Chloroplast
Site of Photosynthesis Has own DNA and can replicate independently GRANA and STROMA
160
Cilia
Short, numerous Involved with cell movement Connected to cell via a basal body Have a 9+2 microtubule arrangement
161
Flagella
Usually 1 or 2 per cell Long Can be in front or back of cell Connected via basal body 9+2 pattern of microtubules
162
Plasma (cell) membrane
Holds in cytoplasm Selectively Permeable Components: Phospholipids=Hydrophobic barrier Cholesterol=provide fluidity Proteins=transport Channels/Carriers), receptors, enzymes, anchors Carbohydrates=cell signaling (self/nonself)
163
Extracellular Matrix
Network of fibrous collagen, and glycoproteins Connected to cytoskeleton via Integrin proteins in membrane Gives support, strength and resilience
164
Endomembrane system
Nucleus, ER LUMEN, RIBOSOMES, ER MEMBRANE, TRANSPORT VESICLES, GOLGI LUMEN AND LYSOSOMES
165
Plant cell
Cell wall Chloroplasts No centrioles One, large vacuole
166
Cell wall
In bacteria, yeast, and plant cells Exterior to plasama membrane Provides shape and protection Made of ceolllose in plant cells
167
Cell wall
In bacteria, yeast, and plant cells Exterior to plasama membrane Provides shape and protection
168
Endosymbiotic Theory
Mitochondria and Chloroplasts evolved from bacteria that were gobbled up by an ancient Cell.
169
Proof of Endosymbiotic Theory
Mitochondria and Chloroplast have own DNA They can replicate independent Same size as present bacteria They have own ribosomes and are bacterial-like
170
What can cross the membrane freely?
Lipid-like molecules Small uncharged molecules (ex. H20, CO2, 02,amino acids) Some small molecules can cross freely but need a helper membrane transport protein (ex. Glucose) Charged substances also need help to cross Large molecules like polymers can’t cross
171
Hydrogen acceptors
NAD+ (1 H) and FAD (2 H)
172
Anaerobic Respiration Steps
1) Glycolysis 2) FERMENTATION (Primitive)
173
Glycolysis
Start with one molecule of glucose Need to use 2 ATPs to start reaction Form 2 NADH Form 4 ATPs (so net 2 ATPs) Form 2 Pyruvic Acid Molecules (3 Carbons) Occurs in the cytoplasm
174
Fermentation
Ethyl Alcohol Yeast and bacteria Lactic Bacteria and muscle fatigue
175
Aerobic Cellular Respiration
Glycolysis Pyruvic Acid Breakdown Krebs Cycle Chemiosmosis and the Electron Transport Chain
176
Pyruvic Acid Breakdown
Starts with 2 Pyruvic Acid Molecules (3 carbons) 2 NADH/Glucose Molecule/Pyruvic Acid 2 CO2/Glucose Molecule/Pyruvic Acid occurs in the mitochondrial matrix
177
Krebs Cycle (a.k.a Citric-Acid Cycle)
Occurs in Matrix Region of Mitochondrion 6 NADH/Glucose Molecule 2 FADH2/Glucose Molecule 2 ATP/ Glucose Molecule
178
Chemiosmosis and the Electron Transport Chain
occurs in the inner membrane cristae of the mitochondria ETC Starts: H+s of (FADH2 and NADH) Ends: Loses all energy and combines with O to form H2O Starts: NADHS and FADH2S Process produces about 32 ATP
179
Contractile Vacuole
Pushes water out so fresh water organism can breath
180
Receptor-mediated endocytosis
Recognizes the shape of the protein and it lets in/out the cell but if somethings not a protein, it won't let it in/out
181
Lac Operon
In bacteria, if lactose is not present, a repressor will bind to the operator, and the operator will not work. If lactose is present, it will bind to the repressor and the repressor will change shape and fall off the operon, allowing the operon to work.
182
Interphase
Most of the time a cell is in Interphase (90% of time) G1 Phase= Cell metabolizes, replicates organelles, increases in volume S Phase= Doubles its DNA G2 Phase= Increases more in size, replicates enzymes and other proteins
183
Methods of Asexual Reproduction
Binary Fission Budding Spore Formation Regeneration
184
Natural Vegetative Reproduction
Bulbs Corms Tublers Runner Rhizome
185
Artificial Vegetative Propagation
cuttings layering grafting
186
cytokinesis
Cytoplasm divides
187
Scientific Method
1. Define Problem 2. Formulate Hypothesis 3. Test Hypothesis -Write out the materials and methods needed Need Positive and Negative Controls 4. Collect Data: Display in form of graph or table or photo in a “Results” section of a scientific paper 5. Analyze data and make conclusions about data in a “Conclusions” section of a scientific paper
188
Mitosis
PMAT
189
Prophase
Chromatin twists tight and thus thickens and shortens Chromatin now appear as Chromosomes Nucleolus disappears Nuclear Membrane breaks down Centriole pairs move to poles of cell Spindle fibers form out of centrioles and bind to kinetochore of sister chromatids
190
Metaphase
Chromosomes line up at the equator of cell (i.e.. metaphase plate) Spindle Fibers are attached to each sister chromatid via kinetochore on chromatid
191
Anaphase
Centromere region comes apart Sister chromatids pulled away from each other Each sister is now a full-fledged chromosome
192
Telophase
Nuclear membranes reform Centriole pairs at the extreme poles Cleavage furrow or cell plate forms Nucleolus reappears in each new cell Spindle fibers recede
193
Prophase I
Same like Mitosis Prophase except here you have “Synapsis” and “Crossing-Over” of homologous pairs of chromosomes Genetic Recombination
194
"Crossing-Over"
After they find eachother, they do criss cross and give a big “hug”; parts of both chromosomes break off and give theirselves to the contradicting chromosome.
195
synapsis
When they find eachother and come together
196
Genetic Recombination
Miss-mash our genetics; makes offsprings different as compared to eachother
197
Metaphase I
Homologous Pairs lining up at equator and not individual sister chromatids
198
Anaphase I
Homologous Pairs separate and NOT sister chromatids
199
Genetic Recombination
Miss-mash our genetics; makes offsprings different as compared to eachother
200
Mitosis
2n-2n
201
Metosis
2n-n
202
Covalent Bonds
A system where two atoms are sharing one electron
203
Ionic Bond
When two opposite unstable charged atoms come together and share electrons with each other (b/c of electrostatic interaction)
204
Polar
Unequal
205
Nonpolar
Equal
206
disulfide bonds
Between the two Ss of the RSSR
207
The bond between the Os and H in H20 are
Polar
208
Hydrogen Bonding
Electrostatic Interaction (negative and positive charge) Inter molecular bond (between different molecules)
209
Polar/nonpolar covalent bonds
Intra molecular bonds (between the same molecules)
210
H bonds allow....
for the many qualities of water we are accustomed to; like boiling water (must break h-bonds) and surface tension
211
Salt
Ionic compound Na+ and Cl-
212
Antony Van Leewanhoek
Simple Microscope
213
Robert Hooke
Compound Microscope
214
Robert Brown
Cell theory
215
Barbara McClintock
discovered jumping genes
216
History of Molecular Genetics
Bacterial transformation with “factors” Transform S bacteria to R bacteria Avery, MacLeod and McCarty (1944) The “factor” was DNA Hershey and Chase (1944) Worked with viruses (bacteriophages) DNA carries genetic instructions Watson and Crick (Rose Franklin)(1953) DNA Structure
217
DNA Transcription
DNA code converted to mRNA Happens in Nucleus DNA code Codons=three base pairs Each codon codes for an amino acid Ex: CAC=Histidine Start Codons at the beginning of genes Stop Codons at the ending of genes Each gene codes for one polypeptide (One Gene-One Polypeptide Hypothesis) mRNA leaves nucleus and enters cytoplasm Single-stranded, ribose sugar, Uracil instead of Thymine mRNA is processed (--shortens) before meeting a ribosome
218
Protein Synthesis-DNA Translation
Translate mRNA (which is really DNA code) to protein Need: mRNA Ribosome T-RNA Amino acids AUG --> Start UAC --> stop
219
exocytosis
form of active transport and bulk transport in which a cell transports molecules out of the cell.
220
Scanning Electron Microscope
100,000X Magnification Can’t view live organisms 3D Image Blast electrons at object