Biological Molecules Flashcards
Covalent bond between two adjacent amino acids in chain of amino acids
Peptide bond
Reaction involved in breaking bonds and what happens during reaction
Hydrolysis
H20 added
Describe how enzyme such as pepsin breaks down a substrate
- substrate shape is complementary to active site
- substrate fits into active site
- induced fit
- enzyme-substrate complex formed
- destabilising/staining of bonds in substrate then forms enzyme-product compex
- products/amino acids then leave active site
Repeats
Improve reliability
Assess spread of results
Allow calculation of mean
Pepstatin acts as a competitive inhibitor of pepsin
What can you conclude about the structure of pepstatin
Similar shape to substrate/protein
Complementary to active site
Triglyceride
Contains only the the elements carbon, hydrogen and oxygen
Insoluble in water
Contains glycerol
Contains ester bonds
Contains fatty acids
Phospholipid
Insoluble in water Contains glycerol Contains ester bonds Important in membrane structure Contains fatty acids
Cholesterol
Contains only carbon, hydogen and oxygen
Insolube in water
Important in membrane structure
Describe how to do the emulsion test for lipids and how a positive result would be identified
Mix with ethanol and add water
Goes cloudy
Mycoproteins produced by microorganisms
How might lipid content of mycoprotein fiffer from food that comes from animals
Less overall lipid/fat
Less/no saturated fat/lipid
More unsaturated fat/lipid
Primary structure
Peptide bonds
Sequence of amino acids
Secondary but not primary
Hydrogen bonds
Initial folding of polypeptide chain
(alpha helix AND B pleated sheets)
Tertiary but not primary or secondary
Overall 3D shape Ionic bonds Supercoiled shape (fibrous) Or Spherical shape (globular)
Quaternary structure ONLY
a and B subunits
Multiple polpeptide chains arranged to make complete protein molecule
Describe formation of hydrogen bonds between 2 molecules of water and explain why water can form these bonds
- Between O and H (of adjacent molecules)
- Between, electropositive H and electronegative O
- Water molecule is polar/has unequal charge distribution
Hydrogen bonds allow water to act as a solvent
Why is ability of water to act as a solvent important for survival of survival of organisms
- medium for reactions
- allows ionic compounds to seperate
- transport
- apoplast-transport of water
- Organism can absorb minerals
- Able to dilute toxic substances
Name given to sequence of amino acids in a protein molecule
Primary structure
Structure if amino acid molecule
NH2 at one end
COOH at oposite end
C in centre bonded to one R and one H
One property of collagen that makes it useful component of blood vessel walls
Strength/toughness/insolubility
Describe structure of collagen molecule
- peptide bonds between amino acids
- every 3rd amino acid is same
- coil/twist/spiral/helix
- left handed heliz
- glycine/small R group allows closeness/twisting of polypeptide chains
- three polypeptide chains
- hydrogen bonds between polypeptide chains
- no/few hydrophilic (R) groups on outside of molecule
- Adjacent molecules joined by crosslinks
- Crosslinks/ends of molecules, being staggered
- fibril
Function if haemoglobin
Transport if oxygen
3 ways in which haemoglobin differs from that of collagen
Haemoglobin has/is:
- globular
- hydrophobic (R) groups on inside/ hydrophilic (R) groups on outside
- 4 subunits
- Two alpha and 2 beta chains
- Alpha helix
- Proportion of glycine similar to that of other amino acids
Testing for proteins
Biuret test
If protein present, colour change form blue to lilac
Add biuret reagent
Testing for lipids
Emulsion test
Add ethanol/alcohol
Add distilled water
Cloudy white emulsion indicates presence of lipids