Biochemistry & Blood Chemistry Flashcards

(44 cards)

1
Q

Describe the different glucose transporters

A

GLUT 1 & 3 - in cell membrane and always ready to go (door for glucose is always open). RBCs and neurons have these

GLUT 2 - in cell membrane and always ready to go (door for glucose is always open). Pancreas and liver (gluconeogenesis) have these (insulin production)

GLUT 4 - “storage” transporter found in adipocytes and skeletal muscle - they have to move to the cell membrane to “open the door” for glucose. Skeletal muscle contractions and presence of insulin is what causes the “door to open” for glucose

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Glycolysis

  1. Where it takes place
  2. Where in the cell it takes place
  3. Nutrient substrates
  4. Nutrient cofactors
  5. Rate liming enzyme
A
  1. All cells undergo glycolysis
  2. Cytoplasm
  3. Glucose
  4. Mg, B3
  5. PFK-1
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What happens after glycolysis if oxygen is present? What is oxygen is NOT present? How does energy production differ (if at all) in these two pathways?

What happens if there’s TOO MUCH glucose?

A

O2: pyruvate —> acetyl CoA in TCA cycle

NO Oz: pyruvate —-> lactic acid (less energy)

If there’s too much glucose, storage pathways are triggered

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What nutrients are needed for conversion of pyruvate —-> acetyl CoA?

A

B1, b2, b3, b5, Lipoic acid

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

TCA cycle

  1. Where it takes place
  2. Where in the cell it takes place
  3. Nutrient substrates
  4. Nutrient cofactors
  5. Rate liming enzyme

What’s the goal of the TCA cycle?

A
  1. Mitochondria
  2. All cells with organelles (mitochondria) so NOT RBCs
  3. Pyruvate —> acetyl CoA, ketogenic amino acids (lysine, leucine)
  4. B2, B3, Iron, Mg
  5. Isocitrate dehydrogenase (isocitrate —> a-ketoglutarate

Goal is to produce electrons for ETC

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

ETC

  1. Where it takes place
  2. Where in the cell it takes place
  3. Nutrient substrates
  4. Nutrient cofactors
  5. Rate liming enzyme
A
  1. All cells with organelles (mitochondria) so NOT RBCs
  2. Inner mitochondrial membrane
  3. ? Electrons from reduction of NAD+ and FAD??
  4. B2, B3, CoQ10, Iron, Copper
  5. Cytochrome c oxidase (COX) - final enzyme in chain responsible for transferring electrons to oxygen (its activity dictates the overall rate of the process)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

CoQ10 - where is in important in cellular respiration? What could cause depletions? What would be deficiency sx? Food sources??

A

Needed in the ETC

Stains, genetic SNP

Muscle weakness, fatigue, mental fatigue

Chicken, beef, herring

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Symptoms of poor mitochondrial energy production?

A

Fatigue, muscle weakness, exercise intolerance, neurological sx, GI

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Where do we get the most ATP production from? (3)

How much ATP?

A

Beta ox (129-131 ATP from 16 chain LCFA)

ETC (36-38)

Ketogenesis (22 ATP from acetoacetate)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Essential amino acids?

A

9 total

PVT - phenylalanine, valine, threonine

TIM - tryptophan, isoleucine, methionine

HALL - histidine, arginine, lysine, leucine

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Conditionally essential - what does this mean and which amino acids fall into this category?

A

At certain life stages when we need a LOT we cannot make enough, like pregnancy, childhood, certain illnesses

Arginine, cystine, glutamine, tyrosine, proline, serine, glycine

“All Cute Girls Try Playing Soft Guitar”

Example - we need high levels of arginine for growth & development, so for young kids, the body needs are HIGHER than the amount the body can naturally make

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Ketogenic vs. glucogenic amino acids

Explain each and give examples. What amino acids are considered dual (both keto and gluco)

A

Ketogenic amino acids are those that ca become ketones by way of acetyl CoA

ONLY ketogenic - lysine, leucine (LL)

BOTH keto and gluco - phenylalanine, isoleucine, threonine, tyrosine, tryptophan (PITTT)

Glucogenic AA are those that can become glucose. If they can enter the Krebs cycle or become a compound that can enter, they are glucogenic. MOST AA’s are glucogenic

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Tryptophan pathway and enzymes/nutrients needed

A

Tryp —-> 5-HTP —> serotonin —> melatonin

Remember tryp can also go down different pathway and make Nicotinic acid (B3) but not a lot is made

BH4, iron, B6, methyl group (SAMe)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Phenylalanine pathway and enzymes needed

A

Phenyl —-> tyrosine —> dopamine —-> NE —-> Epi

BH4, iron, B6 (P5P)

Dopamine —> NE requires vit C, copper

NE —> E requires SAMe & Mag (d/t methylation)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What amino acids are low in plant based proteins?

A

Lysine, methionine, isoleucine, threonine, tryptophan

“Little miss ivy tried tofu” but she was still missing some amino acids!

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What amino acid are we MOST concerned about in vegans? Why?

Best food sources?

Why is this concerning?

A

Lysine (essential, ketogenic)- missing or low in most grains

Food sources = animal products (meat, seafood, dairy, eggs)

Competes for binding with arginine and many plant foods contain MORE arginine than lysine. Arginine promotes herpes simplex (cold sores) in susceptible individuals

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What are high lysine:arginine foods?

Low lysine:arginine foods?

Why important?

A

High - mostly dairy (yogurt, cheese), beets, papaya

Low - many nuts

Competes for binding with arginine and many plant foods contain MORE arginine than lysine. Arginine promotes herpes simplex (cold sores) in susceptible individuals

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What amino acid is used in the urea cycle and nitric oxide cycle? What’s important to know here in relation to the urea cycle and this AA?

What else does this AA contribute to the production of?

would sx of deficiency be?

A

Arginine - helps rid the body of ammonia (elevated in urine associated with liver issues, but if ammonia is elevated consider supplementing with arginine)

Also contributes to creatine production

Sx - nausea, fatigue, lethargy (all ammonia build up sxs), high BP (d/t low N.O), muscle weakness (d/t low creatine and collagen production which also comes from urea cycle)

19
Q

Plant based amino acids, what amino acids are low in these foods?

Corn/grains?
Nuts/seeds?
Beans/legumes?
Peanuts?
Spinach?
Quinoa?

A

Nuts/seeds - lysine
Beans/legumes - methionine & cysteine (these are the two sulfur-forming AA’s)
Peanuts - lysine, methionine, threonine
Spinach - tryptophan
Quinoa - tryptophan

20
Q

What are examples of complete plant protein sources? What does this mean?

A

Soy, quinoa, amaranth, buckwheat, nutritional yeast, hemp seeds, chia seeds

Have decent levels of all 9 essential amino acids

21
Q

Fatty acid synthesis (lipogenesis) - describe pathway

Location

Energy substrate

+ and - of pathway

Purpose

A

acetyl CoA can’t leave mitochondria, so citrate is taken out into cytoplasm via citrate shuttle, then converted to Malonyl CoA via the rate limiting enzymes acetyl CoA carboxylase —-> fatty acid (TG)

Location - cytoplasm
Energy substrate - citrate

(+) Insulin, citrate - fed state
(-) glucagon, palmitoyl CoA, Epi (fasted state)

Fat storage in liver

22
Q

Glycogenolysis - pathway?

Purpose?

RLE?

Nutrients needed

What is low and what is high that stimulates this pathway?

A

Glycogen —> glucose 1-phosphate via glycogen phosphorylase —> glucose-6-phosphate —> glucose

Breakdown glycogen in the fasted state

Glycogen phosphorylase

B6

glucagon, Epi are high, insulin/G6P/ATP are low

23
Q

Gluconeogenesis via pyruvate

Purpose?

Sources of glucose/substrates?

Where does this happen in body? In cell?

Describe pathway

A

Make glucose from non-carb source

Pyruvate, lactate, glucogenic amino acids, glycerol

Liver, kidney, some in SI

Cytoplasm (occurs in ALL cells including RBC)

Pyruvate —(pyruvate carboylase, biotin needed) —> OAA —> malate which leaves mito and enters cytoplasm via malate shuttle. Malate —> OAA —> PEP —> bidirectional steps of glycolysis —> fructose 1,6- bisphosphate (low amounts of fructose 2,6-bisphos. Cause lower producion of PFK1 allowing enzyme that coverts fructose 1,6 to fructose 6 (enzyme fructose 1,6 bisphosphatase) then fructose 6P —> G6P which enters the ER and glucose 6 phosphatase converts to glucose

24
Q

Difference between even and odd chain fatty acids in cellular respiration?

A

Even used to make acetyl CoA and therefore ATP, NOT glucose

Odd can turn into proponyl CoA in TCA cycle and can be turned into glucose

25
Amino acid oxidation Where are AA released from? What are the two pathways they’re used in?
Released from muscle Enters TCA cycle, when used in gluconeogenesis turns into glucose (glucogenic AA’s) or enter ketogenesis which creates ketone bodies (ketogenic amino acids)
26
Describe beta oxidation, what’s produced and what happens if there’s an odd chain FA 3 steps?
Can’t cross mitochondrial membrane so ACYL group attached to carnitine (ACYL CARNITINE, active FA this is the “activate” step) and crosses OMM via CAT1 then IMM via protein transporter ACYL carnitine translocase and enter mitochondria (this is the “transport” step), carnitine goes back to cytoplasm and we’re left with acetyl CoA and ACYL CoA after oxidation takes place (“oxidation” step
27
Ketogenesis When does it happen and what are the substrates?
After beta ox Substrates = acetyl CoA from oxidation of FA or oxidation of ketogenic AA
28
Phytochemicals (AKA ___) are….
AKA phytonutrients Compounds produced by plants that provide health benefits to the body These bioactive compounds are produced by plants for their protection against stress & predators. In many cases, a higher stress environment for the plants will actually results in higher concentrations of these phytochemicals (may be why organic foods have higher levels of certain phytochemicas) Most have antioxidant and anti-inflammatory compounds
29
Polyphenols (phytochemicals!!) foods in each category Anthocyanins Proanthocyanins Phenolic compounds Flavones Flavanols & catechins Flavonols Isoflavones
Anthocyanins - berries, red wine (most purple/blue/black foods) Proanthocyanins - fresh grapes, red wine, and other dark pigmented fruits like cranberries, black currant, elderberry Phenolic compounds (think spices/herbs) - oregano, rosemary, cinnamon, clove, turmeric Flavones - green olives Flavanols (AKA Flavan-3-ols) & catechins (ca-TEA-chins) - chocolate, tea, grapes - green tea especially rich in the catechins EGCG!! REMEMBER!!) Flavonols - quercetin found in apples, oats, citrus fruits (known for helping to stabilize mast cells and can use used with histamine intolerance Isoflavones - geinstein found in soybeans and soy products (remember this one!!)
30
Organosulfur Compounds (phytochemicals!!)- foods in each category Sulfides & thiols Isothiocyanates Indoles
Sulfides & thiols - found in onions, garlic, leeks, olives, scallions Isothiocyanates - sulforaphane, found in cruciferous veg like broccoli, cabbage, kale, rich in broccoli sprouts Indoles - I3C (Indole-3-carbinol) - derived from breakdown of glucobrassicin found in cruciferous veg. Once in stomach I3C can produce DIM - I3C & DIM have anti-estrogenic activities
31
Carotenoids (phytochemicals!!) categories & foods in each category
Lycopene (red/pink) - tomatoes, watermelon, sweet potato, pink grapefruit, pink guava, apricot, rosehip Beta-carotene (orange) - carrots, sweet potato (remember beta-c is a precursor to vit A; there’s a genetic SNP that modulates conversion of beta-c to active vit A Lutein & Zeaxanthin (both found in yellow & green foods, remember by thinking you can’t make green w/o yellow!) - corn, yellow peppers, Yukon gold potatoes, green leafy veg like kale, parsley, spinach Remember carotenoids are fat soluble!!
32
What nutrients are associated with abnormal (high or low) MCH and MCHC?
MCH (average amt of Hb in a singular RBC) MCHC - amount of Hb concentrated in a volume of RBCs when high [macrocytic anemia] possibly b12/b9 anemia. Body producing abnormally large RBC that have high levels of Hb b/c body isn’t getting enough b12/b9 (or have condition that prevents body from absorbing them) - You have fewer total RBCs, which causes anemia - the ones you do have are extra large and packed with hemoglobin because their outer part couldn’t divide normally. when low (microcytic) body isn’t making enough hemoglobin - possibly iron anemia (maybe high blood loss?), b6 anemia, need for vit C
33
What nutrients are associated with abnormal (high or low) MCV?
MCV - measures average size of your RBCs when high (macrocytic anemia) possibly b12/folate deficiency/anemia, pernicious anemia When low (microcytic anemia) - iron deficiency anemia, b6 deficiency anemia
34
Understanding iron markers (bus analogy)
iron: measures total amount of iron in liquid portion of the blood, nearly all of which is bound to transferrin (the bus). Serum iron can be thought of as the passengers on the buses. Ferritin: storage form of iron. Ferritin is the number of passengers waiting at the bus stop. Decreased serum ferritin serves as an early sign of declining stores of body iron and can be a highly sensitive marker for iron-deficiency anemia. Transferrin. The iron transport protein. Transferrin is the bus Each transferrin has 2 binding sites (2 doors on the bus?) TIBC (total iron-binding capacity): the amount of transferrin in your blood that's available to attach to iron. This could be thought of as the total number of seats on all the buses, full or empty and waiting for iron to hitch a ride. UIBC (unsaturated iron-binding capacity): unsaturated is another way of saying empty - these are the portions of transferrin that are not currently bound to iron. UIBC could be thought of as the UNFILLED seats on the bus. We don’t see this marker very frequently on lab results anymore
35
B vitamin Anemias B6 deficiency related anemia B9/b12 related deficiency B12 related deficiency
B6 - usually presents as microcytic (small RBCs) and hypochromic (pale color) anemia, B6 essential for heme synthesis (process of creating RBCs) NOTE iron is the most common cause of microcytic anemia - docs will almost always rule out IDA first in all types of anemia B9/b12 - usually presents as macrocytic or Megaloblastic anemia (large RBCs) B12 - pernicious anemia (autoimmune condition that attacks IF which is required to break b12 off from food for absorption)
36
What’s the preferred measurement of vitamin D?
Serum 25-hydroxy Vit D3 (25-OH2, D3)
37
Nutrients associated with high or low calcium in the blood
Remember, calcium is mostly stored in the bone. SO when levels in blood are high, it means its being pulled from the bones… High serum Ca++ can indicate excess vit D intake High serum phosphorus needs to be balanced by calcium and can pull calcium from bones to balance it out *PTH regulates serum Ca++ and phosphorus concentrations (sometimes used as marker for calcium status)
38
What blood levels would you associate with a high carb diet?
HbA1c, glucose, fasting insulin, TGs (increase with high intake of simple sugars/fructose), HDL (can decrease with high refined CHO intake)
39
BUN, creatinine, and BUN/Creatitine ratio - what do these markers mean and what might a high vs. low ratio indicate?
BUN - waste product that kidneys filter out of blood and remove through urine. Represents amount of nitrogen produced from metabolism of proteins - more sensitive to hydration, protein intake, and liver function Creatinine - waste product that kidneys filter out of blood and remove through urine. A normal waste product of muscle - reflects muscle mass & kidney filtration BUN/Creatinine - renal function indicator, commonly used to diagnose acute or CKD or damage; in healthy people BUN is higher. When HIGH could be dehydration, high protein intake. LOW could be low protein intake/malnutrition, over hydration, advanced kidney disease, liver disease
40
What micronutrients are associated with low alkaline phosphatase?
*Primarily liver enzyme* Zinc & Vit C deficiency Excessive Vit D
41
What micronutrient is associated with low uric acid? What is uric acid?
Molybdenum and copper deficiency, b12/folate anemia waste product your body makes when it breaks down purines, which are natural substances found in your body’s cells & certain foods (like red meat, seafood, alcohol, and sugary drinks—especially those with high-fructose corn syrup
42
What is albumin and why might it be low or high?
Main protein in your blood made by liver HIGH - dehydration LOW - alcoholism, malnutrition, IR, need for vit C
43
Describe organic acids
Metabolites that can help shine light on various things happening in the body. Typical ally look at a urine test but some can be blood
44
Methylmalonic acid - what is it? What nutrient is it associated with?
MMA is an organic acid that can be assessed in blood and is ordered to provide a more accurate picture of B12 status B12 is nutrient cofactor required for MMA to be converted to succinyl CoA If MMA is high that can tell us we aren’t able to convert MMA to succinyl CoA (usually d/t inadequate b12). Even when we have robust levels of serum b12, if MMA is elevated, that b12 isn’t being activated and used properly