Basic Micro Flashcards

1
Q

Invented the first compound microscope in1597

A

Zacharias Janssen

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2
Q

suggested to be first to observe microorganisms; 20 years before Hooks, 29 years before leeuwenhoek

A

Athanasius Kirche

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3
Q

create compound microscope in 1676 “wee animalcules”

A

Antonie van leeuwenhoek

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4
Q

“cells” in cork, “elongated stalks” fungi, 30x compound microscope 1665

A

Robert Hooke

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5
Q

Author of meat in jar experiment 1668

A

Francesco Redi

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6
Q

Author of mutton broth in flask, unsealed boiling 1745

A

John Needham

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7
Q

Redone mutton broth experiment, sealed boiling 1768

A

Lazzaro Spallanzani

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8
Q

debunked spontaneous generation via passing air through strong acid

A

Franz Schultze

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9
Q

debunked spontaneous generation via passing air through red-hot tubes

A

Theodor Schwann

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10
Q

debunked spontaneous generation via filtering air through sterile cotton wool 1850

A

Georg Friedrich Schroder
Theodor von Dusch

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11
Q

Autho of Swan-neck flask experiment, prroving life did not arise from non-life 1822-1895

A

Louis Pasteur

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12
Q

Delivered the final blow against spontaneous generation; dust carries microorganisms; provided evidence for the existence of heat-resistant bacteria 1820-1893

A

John Tyndall

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13
Q

“Disease are caused by specific agents called germs”

A

Germ theory of disease

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14
Q

“disease was caused by invisible living creatures” 1478-1553

A

Girolamo Fracastoro

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15
Q

showed that Beauveria bassiana (fungi) cause silkworm disease 1773-1856

A

Agostino Bassi

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16
Q

showed that the great potato blight of ireland was caused by Phytophthora infestans (fungus-like) 1845

A

Miles Joseph Berkeley

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17
Q

smut and rust fungi cause cereal crop disease; Founding father of plant pathology 1853

A

Heinrich Anton de Bary

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18
Q

savior of mothers; asepsis

A

Ignaz Philipp Semmelweis 1861

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19
Q

used phenol or carbolic acid in surgical dressing and heat- sterilized surgical instruments; Father of Antiseptic Surgery 1867

A

Joseph Lister

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20
Q

showed that the pebrine disease of silkworms was caused by Nosema bombycis (protozoa)

A

Louis Pasteur

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21
Q

established the relationship between B. anthracis and anthrax, Tuberculosis, cholera

A

Robert Koch

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22
Q

State the Principles of Koch Postulates

A
  1. The suspected causative agent must be absent from all healthy organisms but present in all diseased organisms.
  2. The causative agent must be isolated from the diseased organism and grown in pure culture.
  3. the cultured agent must cause the same disease when inoculated into a healthy susceptible organism.
  4. The same causative agent must then be reisolated from the inoculated diseased organism
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23
Q

The informal “vaccination” before vaccines were developed

A

variolation

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24
Q

Diseases of the vaccines created by Pasteur and his co-workers

A

chicken cholera, anthrax, rabies

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25
Q

Developed porcelain bacterial filterer 1851-1908

A

Charles Chamberland

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26
Q

Tobacco mosaic disease caused by an infectious agent smaller than a bacterium he called “virus”1898; “contagium vivum fluidum”; one of the founders of virology

A

Martinus Beijerink

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27
Q

developed 606th compound SALVARSAN; organic arsenal used to treat syphilis

A

Paul Ehrlich

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28
Q

demonstrated role of yeasts in fermentation; alcohol fermentation by yeasts; lactic acid fermentation by bacteria

A

Louis Pasteur

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29
Q

discovered the existence of heat-resistant bacterial endospores

A

Ferdinand Cohn

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30
Q

studied soil and soil microorganisms; developed enrichment cultures and selective media

A

Sergei Winogradsky
Martinus Beijerink

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31
Q

Discovered nitrogen fixation

A

Martinus Beijerink

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32
Q

Discovered lithotophy and chemoautotrophy

A

Sergei Winogradsky

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33
Q

microscope that uses light waves and mirrors

A

simple, compound/complex light microscopes

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34
Q

microscope that has higher magnification and resolving power, uses electron beams as energy source, for <0.2mm objects, in vacuum

A

electron microscope

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35
Q

Light microscope; darker objects; bright micro field; for gross morphology

A

bright field

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36
Q

light microscope; dark micro field; luminous objects; for invisible, cannot be stained, and distorted by staining specimen

A

dark field

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37
Q

light microscope; based on refractive indices; detailed examination for internal structure

A

Phase contrast

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38
Q

Light microscope; based on refractive indices; no diffraction halo; 3D appearance

A

differential interference contrast

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39
Q

light microscope; detection of immunological reactions ; uses fluorochromes; visualize specimen that fluoresce

A

fluorescence

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40
Q

light microscope; use for thick specimen like biofilms; to visualize structures

A

confocal

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41
Q

light microscope; to examine living cells within intact issues

A

two-photon

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42
Q

electron microscope; ultrastucture in thin section of cells; resolution up to atomic level of thinner objects; examine viruses

A

TEM

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43
Q

electron microscope; surface features; reveals 3D image

A

SEM

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44
Q

organic compounds carrying chromophoric ions; provides increase in contrast for internal and external cell structure visualization

A

Dye/ stains

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45
Q

Types of stains

A

basic/positively-charged, acidic/negatively charged, neutral

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46
Q

staining type; only one dye

A

simple staining

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47
Q

staining type; one dye; cells same color as dye

A

positive/direct simple staining

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48
Q

staining type; one dye; cells are colorless or luminous

A

negative/ indirect simple staining

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49
Q

basic dyes/ positive stains

A

crystal violet, malachite green, methylene blue, safranin

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50
Q

acidic dye/ negative stains

A

acid fuchsin, eosin, rose bengal, india ink, nigrosine

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51
Q

stain type; 2 or more dyes/ reagents; ex gram stain, acid-fast

A

differential staining

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52
Q

makes dye less soluble to adhere to cell walls

A

mordant- iodine

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53
Q

differential staining; for diagnosis of tuberculosis

A

acid fast staining; Ziehl-Neelsen, kinyoun

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54
Q

differential staining; for capsules, endospores, flagella, storage granules

A

structural staining

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55
Q

capsule staining; negative; bacterial cells resuspended in antiserum that contains antibodies raised against the capsule

A

quellung reaction

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56
Q

capsule staining; cv as primary stain, decolorizing agent and counterstain 20% copper sulfate

A

Anthony’s method

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57
Q

capsule staining; congo red as ph indicator; phenol+ CH3COOH+FeCl3, phenol+ FeCl3 (acid fuchsin)

A

Maneval’s staining

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58
Q

culture; population arose from a single cell

A

pure/ axenic culture

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59
Q

method to increase population of microorganisms by providing nutritional and physical requirements

A

cultivation

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60
Q

types of culture media based on physical state

A

liquid/ broth, semi-solid 0.1-0.5% solidifying agent, solif 1.5-2.0% sol a

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61
Q

types of culture media based on chemical composition

A

synthetic, complex

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62
Q

types of culture media according to principal function, purpose or application

A

general purpose, differential

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63
Q

isolation technique; visible colonies

A

plating

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64
Q

isolation technique; for isolation of unusual physiological types of microorganisms which are present in small numbers/ grow slowly; isolation by combining nutrient and physical conditions

A

enrichment culture

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65
Q

isolation technique; used if desired microorganisms is present at higher level

A

serial dilution

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66
Q

isolation technique; use micropipette/ microprobe to physically pick a single cell to transfer to an agar medium

A

single-cell isolation technique

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67
Q

isolation technique; for samples with low population

A

membrane filter technique

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68
Q

culture preservation; considers time interval of transfers

A

periodic transfer to fresh media

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69
Q

culture preservation; to limit availability of oxygen thereby reducing metabolic rate

A

overlaying cultures with mineral oil

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70
Q

culture preservation; rapid drying in frozen state

A

lyophilization

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71
Q

culture preservation; uses cryoprotective agent, -196C

A

freezing with liquid nitrogen

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72
Q

culture preservation; samples grown on sterile paper discs with nutrient and air dried, use of calcium chloride

A

drying

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73
Q

complete destruction of all microorganisms and endospores

A

sterilization

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74
Q

killing, inhibition, or removal of pathogenic microorganisms

A

disinfection

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75
Q

reduction of microbial population to levels considered safe by public health standards

A

sanitization

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76
Q

carry out antisepsis, effective against microorganisms does not damage tissues

A

antiseptics

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77
Q

mechanical removal + use of mild chemicals on tissues or skin

A

degerming

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78
Q

example of moist heat method

A

pasteurization, boiling, steam under pressure, tyndallization

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79
Q

example of dry heat application

A

direct flame

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80
Q

microbial control ; decreased enzyme activity;decrease metabolic activity

A

refrigeration

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81
Q

microbial control; exclusion of microorganisms; for heat sensitive solutions

A

filtration

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82
Q

microbial control; irreversible denaturation of enzymes and structural proteins

A

moist heat

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83
Q

microbial control; oxidation of molecular components

A

dry heat- hot air

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84
Q

microbial control; lowers water activity; microbiostasis

A

dessication

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85
Q

microbial control; lowers water activity; microbiostasis; rapid freezing then sublimation

A

lyophilization

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86
Q

microbial control; osmotic shock

A

addition of solutes

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87
Q

microbial control;breaks DNA double strand; for materials that cannot be autoclaved

A

ionizing radiation

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88
Q

microbial control; formation of thymine dimers;poor penetrating power-surface disinfection

A

non-ionizing radiation

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89
Q

microbial control; thymine dimers and oxidation ROS

A

radiation- sunlight

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90
Q

microbial control; antimicrobial agent; substance that kills microorganisms

A

cidal; bactericidal, fungicidal etc

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91
Q

microbial control; antimicrobial agent; prevent growth of microorganisms

A

static; bacteriostatic, fungistatic etc

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92
Q

microbial control; membrane disruption and protein denaturation

A

phenol and phenolics

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93
Q

microbial control; phenol and phenolics; inhibits fatty acid biosynthesis pathway; banned by USFDA

A

triclosan

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94
Q

microbial control; protein denaturation; inhibit cell metabolism; disrupts cell membrane; lyse cell; cidal to enveloped virus

A

alcohol

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95
Q

microbial control; group VIIA

A

halogens

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96
Q

microbial control;halogens; oxidation of celllular components

A

iodine, chlorine, bleach

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97
Q

microbial control;halogens; interferes with bacterial metabolism ; bacteriostatic

A

fluorine/fluoride

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98
Q

microbial control; protein denaturation; oligodynamic, no selective toxicity

A

heavy metals

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99
Q

microbial control; protein denaturation; oligodynamic, no selective toxicity; used to treat syphilis

A

mercury

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100
Q

microbial control; protein denaturation; oligodynamic, no selective toxicity; combined with antibiotics; coating in med supplies

A

silver

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101
Q

microbial control; nucleic acid and enzyme inactivation

A

alkylating agents; aldehydes, ethylene oxide

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102
Q

microbial control; oxidation of cellular components ; disinfectant/ antiseptic

A

peroxygens, hydrogen peroxide

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103
Q

measuring microbial control; time needed to kill a given number of organisms at specifc temp

A

thermal death time

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104
Q

measuring microbial control; time required to destroy 90% of organisms

A

decimal reduction time; D value

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105
Q

measuring microbial control; smallest amount of agent needed to inhibit the growth of a test organism

A

MIC

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106
Q

classification system; based on arbitrary chosen criteria

A

artificial

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107
Q

classification system; arranges organisms into groups whose members share many characteristics.

A

natural

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108
Q

classification system; natural classification; based on mutual similarity of the organism phenotypes

A

phenetic system

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109
Q

classification system; based on evolutionary relationships rather than general resemblance

A

phylogenetic or phyletic system

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110
Q

2 kingdom scheme; carolus linnaeus 1735

A

animalia, vegetabilia

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111
Q

3 kingdom system; primitive and advanced forms

A

Ernst Haeckel

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112
Q

2 empire system; prokaryote and eukaryote 1937

A

Edouard Chatton

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113
Q

the 4th kingdom in the 4 kingdom scheme by Herbert Copeland 1938

A

Monera

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114
Q

5 kingdom scheme

A

Robert Whittaker

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115
Q

6 kingdom Scheme 1977

A

Carl Woese

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116
Q

Woese, Kandler and Wheelis 1990

A

3 Domains of life

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117
Q

ubiquitous; conserved for identification yet variable to determine evolutionary relationships

A

rRNA

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118
Q

system used in nomenclature

A

Binomial nomenclature

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119
Q

Nutritional type; energy source sunlight; carbon source C02

A

photoautotroph

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120
Q

Nutritional type; energy source sunlight; carbon source organic compounds

A

photoheterotroph

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121
Q

Nutritional type; energy source inorganic chemicals; carbon source C02

A

chemoautotroph

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122
Q

Nutritional type; energy source organic compounds; carbon source organic compounds

A

chemoheterotroph

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123
Q

inclusion bodies; stored carbon and energy source

A

glycogen granules

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124
Q

inclusion bodies; lipid-like, stored carbon and energy source

A

PHB

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125
Q

inclusion bodies; stored nitrogen source polymer of amino acids, produced in times of stress

A

cyanophycin

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126
Q

inclusion bodies; contains enzymes involved in carbon fixation

A

carboxysomes

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127
Q

inclusion bodies; present in Bacillus thuringiensis

A

crystal proteins

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128
Q

inclusion bodies; impermeable to water and solutes but not to gases, for buoyancy

A

gas vacuoles

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129
Q

inclusion bodies; not an energy storage, orientation for favorable conditions

A

magnetosomes

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130
Q

inclusion bodies; inorganic; metachromatic polyphosphate reservoirs

A

volutin

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131
Q

inclusion bodies; inorganic; energy and electron source; present in T. namibiensis

A

sulfur granules

132
Q

rapid approach for evaluating polymorphisms between strains

A

genome fingerprinting

133
Q

genome fingerprinting; fragments of DNa generated from individual genes or whole genomes

A

ribotyping

134
Q

acts like a copying machine

A

PCR

135
Q

determine relatedness between strains; gold standard for the delineation of bacterial species

A

DNA-DNA hybridization

136
Q

growth where the cells double its numbers

A

exponential growth

137
Q

most common mechanism of replication in bacteria; asexual reproduction

A

binary fission

138
Q

The time it takes the cell to double its numbers

A

generation time

139
Q

proteins that interact to form a division apparatus in the cell (divisome

A

fts proteins- filamentous temperature-sensitive

140
Q

orchestrates the synthesis of new cytoplasmic membrane and new cell wall material

A

divisome

141
Q

protein that forms a constricting ring at the division site

A

FtsZ

142
Q

protein that serves as the driving force behind membrane invagination at the division site

A

FtsA

143
Q

protein that helps in separating the replicated bacterial chromosome

A

FtsK

144
Q

protein that plays a role in the later stages of peptidoglycan synthesis

A

FtsI

145
Q

also known as the adaptation phase; synthesis of protoplasm; no immediate increase in cell numbers or mass; synthesis of new components

A

lag phase

146
Q

growth and division at the maximal rate; constant growth rate; cells are uniform chemically, metabolically, and physiologically

A

log/ exponential growth phase

147
Q

no net increase; growth rate tapers off; equal death and growth rate;

A

stationary phase

148
Q

decline of viable cells; death higher than growth

A

death / logarithmic decline phase

149
Q

flow system of constant volume to which fresh medium is added continuously and spent culture medium removed at a constant rate

A

chemostat/ continuous culture

150
Q

when a system is in equilibrium; cell number and nutrient status constant

A

steady state

151
Q

measuring of microbial growth; total cell count; uses squares to determine cell count

A

counting chamber method/ Petroff-Hausser chamber

152
Q

measuring of microbial growth; total cell count; initially developed to count blood cells; uses electrodes; senses the change in resistance in an electrolyte solution that takes place when a cell passes through a small opening automatically counting cells

A

coulter counter method

153
Q

measuring of microbial growth; total cell count; employed for counting bacteria in milk samples; cheap and rapid; gives indirect information about the herd from which the milk was drawn

A

breed count

154
Q

measuring of microbial growth; uses cfu/ml; one cell gives rise to one colony;employs serial dilution

A

viable cell count/ viable plate count

155
Q

measuring of microbial growth; viable cell count; volume of sample is 0.1-1ml; involves molten agar; surface and subsurface colonies

A

pour plate method

156
Q

measuring of microbial growth; viable cell count; volume of sample is 0.1 ml; surface colonies

A

spread plate method

157
Q

measuring of microbial growth; viable cell count; uses 20 ul of sample; valid colony counts 10-20 ul

A

Miles and Misra (drop method)

158
Q

measuring of microbial growth; viable cell count; uses a logarithmically decreasing volume of sample by dispensing it on a petri dish in an archimedes spiral

A

Spiral plate method (spiral plater)

159
Q

measuring of microbial growth; viable cell count;for dairy and food products; use of screw-capped tubes/ bottles of varying sizes; pre-determined amounts of melted and inoculated agar are added into the tube and the agar is made to solidify as a thin layer on the inside of the vessel; colonies are counted by rotating the vessel

A

roll tube method

160
Q

measuring of microbial growth; viable cell count; to concentrate the cells

A

Filtration; membrane filter technique

161
Q

measuring of microbial growth; viable cell count; a statistical estimating method based on the fact that the greater the number of bacteria in a sample, the more dilution is needed to reduce the density to the point at which no bacteria are left to grow in the tubes in a dilution series; combines dilution to extinction with statistical probability

A

most probable number method (MPN)

162
Q

measuring of microbial growth; less costly than viable count; ie electric particle counting, detection of carbon isotopes

A

rapid semi/ automated counts

163
Q

determination of mass; direct types

A

wet and dry weight determination

164
Q

determination of mass; indirect method; uses spectrophotometer

A

turbidimetric methods

165
Q

used to standardized the number of bacteria in a liquid suspension

A

McFarland standards

166
Q

measurement by chemical analysis; biochemical assays; can be used to estimate living biomass (luciferin-luciferase assay)

A

ATP and total Adenylate Nucleutides

167
Q

represents the quantity of energy being stored; expressed in units of weight/ units of energy

A

biomass

168
Q

adaptation of psychrophilic bacteria

A

-largely unsaturated fatty acids in their plasma membranes
- have greater amounts of alpha helix and lesser contents of beta sheet secondary making their proteins less rigid and greater flexibility in catalyzing reactions at colder environments

169
Q

adaptation of thermophilic bacteria

A

-high G+C content in their DNA
-presence of highly saturated membrane fatty acids
-hyperthermophiles membranes has phytane
-heat stable structural proteins and proteins are modified for thermal stability

170
Q

Response of aerobes and aerotolerant anaerobes to presence of oxygen

A

-production of superoxide dismutase ( prevents lethal accumulation of superoxide)
-having the enzyme catalase (directed to decompose H202)
-peroxidase enzymes in LAB in place of catalase in some species

171
Q

Response of obligate anaerobes to presence of oxygen

A

-lacks superoxide dismutase, catalase, and/or peroxidase (reason oxygen is toxic to them)
-presence of carotenoid pigments (all photosynthetic, some non-photosynthetic are protected from the lethal oxidation of singlet oxygen due to this)

172
Q

Biochemical test; used to determine if the mcg is able to detoxify hydrogen peroxide; produces bubbles as a positive reaction

A

catalase test

173
Q

Biochemical test; to determine the presence of cyt c oxidase enzyme ; oxidizes tetramethyl-p-phenylenediamine dihydrochloride TMPD resulting to indophenol blue positive reaction

A

oxidase test

174
Q

microorganisms which live in dry environments (due to lack of water)

A

xerophiles

175
Q

microorganisms which live in environments with high sugar

A

osmophiles

176
Q

growth factors; required for the synthesis of nucleic acids (DNA and RNA)

A

purines and pyrimidines

177
Q

growth factors; required for the synthesis of proteins

A

amino acids

178
Q

growth factors; needed as coenzymes and functional groups of certain enzymes

A

vitamins

179
Q

mutant strains of bacteria that require growth factor not needed by the wild type

A

auxotrophs

180
Q

needed for the synthesis of amino acids, purines, pyrimidines, etc

A

nitrogen

181
Q

present in nucleic acids, phospholipids, nucleotides etc ; form inorganic phosphates

A

phosphorus

182
Q

needed for the synthesis of cysteine and methionine, some CHO, biotin and thiamine etc

A

sulfur

183
Q

mcgs that use CO2 as sole or principal carbon source

A

autotrophs

184
Q

mcgs that use reduced, preformed organic molecules as carbon sources

A

heterotophs

185
Q

mcgs that use light as their energy source

A

phototrophs

186
Q

mcgs that obtain energy from oxidation of organic/ inorganic compounds

A

chemotrophs

187
Q

mcgs that use reduced inorganic compounds as their electron source

A

lithotrophs

188
Q

mcgs that use reduced organic compounds as their electron source

A

organotrophs

189
Q

nutrient uptake; molecules from an area of high concentration to low concentration; limited to a few small useful molecules (ie glycerol, H2O, O2, and CO2)

A

passive diffusion

190
Q

nutrient uptake; involves carrier molecule( i.e. permease) to increase rate of diffusion; higher to lower conc

A

facilitated diffusion

191
Q

nutrient uptake; metabolic energy is used to move molecules to the cell interior where the solute concentration is already higher (against conc gradient); requires expenditure of metabolic energy ; w transport proteins

A

active transport

192
Q

nutrient uptake; active transport; mediated by transporters; no modification of substances transported; uniporters; energy provided by ATP hydrolysis

A

primary active transporters

193
Q

nutrient uptake; active transport; used potential of ion gradients; no modification of substances being transported; cotransporters- symport and antiport

A

secondary active transport

194
Q

nutrient uptake; active transport; substances are modified as they are transported into the membrane; i.e. best translocation system -phosphoenolpyruvate: sugar phosphotransferase system

A

Group translocation

195
Q

nutrient uptake; needed for cytochrome and several eznymes; uses siderophores

A

iron uptake

196
Q

genetic transfer; cell to cell contact

A

conjugation

197
Q

extra chromosomal independently replicated DNA in bacteria and yeasts

A

plasmids

198
Q

plasmid that can exist w/wo being integrated into the host’s chromosome

A

episome

199
Q

genetic transfer; via viruses (most common)

A

transduction

200
Q

genetic transfer; transduction; occurs during the lytic cycle of virulent and temperate viruses; host DNA becomes part of the virion DNA

A

generalized transduction

201
Q

genetic transfer; transduction; occurs only in some temperate viruses; transfer of specific region of the host chromosome into the virus replacing some of the viral genes

A

specialized/ restricted transduction

202
Q

genetic transfer; uptake of naked DNA molecule or fragment from the medium and its incorporation into the recipient cell ; contact with competent cell (able to take up DNA)

A

transformation

203
Q

genetic transfer; used in microorganisms with no known conjugation system; uses enzymes to digest cell wall

A

protoplast fusion

204
Q

unicellular fungi

A

yeast

205
Q

fungi phylum; motile spores with flagella

A

chytridiomycota

206
Q

fungi phylum; resistant zygosporangium as sexual stage

A

zygomycota

207
Q

fungi phylum; arbuscular mycorrhizae

A

glomeromycota

208
Q

fungi phylum; sexual spores borne internally in sacs called asci

A

ascomycota (sac fungi)

209
Q

fungi phylum; elaborate fruiting body called basidiocarp

A

basidiomycota (club fungi)

210
Q

fungi phylum; unicellular fungi that are obligate intracellular parasites; some are human pathogens; lack mitochondria, peroxisomes, and centrioles; form a very early-branching lineage of eukarya; capable of forming spores

A

microsporidia

211
Q

fungi phylum; aquatic; only fungi with flagellated spores/ zoospores; majority are saprobic; some are parasites; simplest true fungi ; diverged earliest

A

chytridiomycota

212
Q

fungi phylum; sexual reproduction via zygospores (resistant heterokaryons) producing genetically variable spores; asexual reproduction via sporangiospores and chlamydospores; mostly saprobic

A

zygomycota

213
Q

fungi phylum; capable of infecting roots of plants; associated with ~90% of plant species; important symbiotes of plant roots increasing its absorption capacities; obligate symbiotes

A

glomeromycota

214
Q

fungi phylum; largest division; presence of ascus (sac-like cases); sexual reproduction ascospores ; asexual reproduction conidia/conidiospores (naked spores)

A

ascomycota

215
Q

fungi phylum; sexual reproduction via club-shaped reproductive structures (basidia) containing basidiospores; uncommon asexual reproduction

A

basidiomycota (club fungi)

216
Q

fungi phylum;eclectic group; unknown sexual structures; only an anamorph is known (asexual state; imperfect fungi

A

deuteromycetes

217
Q

morphological and physiological conversion of certain fungi from one phenotype to another when such fungi change from one environment to another

A

fungal dimorphisms

218
Q

examples of fungi that are dimorphic

A

Blastomyces, coccidioides, histoplasma, paracoccidioides. sporothrix, candida albicans

219
Q

General characteristics of fungi

A

all eukaryotic
most are filamentous
some unicellular
protoplasm of hypha or cell is surrounded by a rigid wall (chitin and glucans, some cellulose) 80-90 % polysaccharide
many reproduce both sexually and asexually
all are chemoheterotrophic
all are achlorophyllous
mainly saprophytic

220
Q

Haploid cells from 2 different mycelia fuse to form a heterokaryotic cell with 2 or more nuclei

A

plasmogamy

221
Q

Nuclei fuse to form a diploid zygote

A

Karyogamy

222
Q

fungal morphology; tubular filament exhibiting apical growth

A

hypha

223
Q

fungal morphology; mass of hyphae

A

mycelium

224
Q

fungal morphology; body/soma of fungi

A

thallus

225
Q

fungal morphology; types of hyphae; based on septation

A

septate
coenocytic/ non septate

226
Q

fungal morphology; types of hyphae; based on function; penetrate the media and absorb food

A

vegetative hyphae

227
Q

fungal morphology; types of hyphae; based on function; directed above the surface of media

A

aerial hyphae

228
Q

fungal morphology; types of hyphae; based on function; aerial hyphae that carry different spores

A

reproductive hyphae

229
Q

specialized hyphal structure; outgrowth of somatic hypha in parasitic in fungi ; fungal hypha penetrate plant cell wall

A

Haustoria

230
Q

specialized hyphal structure; root-like structure

A

rhizoids

231
Q

specialized hyphal structure; hypha that connects two rhizoids

A

stolon

232
Q

specialized hyphal structure; formed by nematode-trapping fungi ; adapted for trapping and killing prey

A

ring

233
Q

Nutrition types of fungi

A

chemoheterotrophic
absorptive; some phagocytic
saprophytic or parasitic

234
Q

preferred carbon source of fungi

A

glucose or maltose

235
Q

fungal environmental interactions; associations between fungi and algae/cyanobacteria; biomonitors of atmospheric quality

A

lichens

236
Q

role of fungi in lichens

A

mycobiont

237
Q

role of algae/cyanobacteria in lichens

A

photobiont

238
Q

common reproductive structures of lichens

A

soredia

239
Q

method to determin the age of exposed rock surfaces based on the size of lichen thalli

A

lichenometry

240
Q

compound used for the suppression of tuberculosis, bioactive compound mainly found as a secondary metabolite in lichens

A

usnic acid

241
Q

symbiotic association between plant roots and fungi

A

mycorrhizae

242
Q

asexual reproduction; hyphae break up into their component cells that behave as spores (arthrospores- fragmented hyphal cells- arthroconidia)

A

fragmentation

243
Q

asexual reproduction; simple splitting of a cell into 2 daughter cells by constriction and formation of a cell wall

A

fission

244
Q

asexual reproduction; production of a small outgrowth from a parent cell

A

budding

245
Q

asexual reproduction; most common; varied size, shape, number and arrangement of cells and manner

A

asexual spore formation

246
Q

types of asexual spores; borne within a sporangium

A

sporangiospores

247
Q

types of asexual spores; sporangiospores; motile with flagella

A

zoospores

248
Q

types of asexual spores; sporangiospores; non motile

A

aplanospores

249
Q

types of asexual spores; exogenous/ free/naked

A

conidiospores

250
Q

types of asexual spores; budding spores

A

blastospore

251
Q

types of asexual spores; based on spore development;
develop by septation and fragmentation; at tip of hypha (arthrospores) or intercalary (chlamydospores)

A

thallic

252
Q

types of asexual spores; based on spore development; develop by budding and swelling; single spores or chain of spores (ie blastospores, phialospores)

A

blastic

253
Q

3 phases of fungal sexual reproduction

A

plasmogamy; union of 2 protoplasts
karyogamy; fusion of 2 nuclei brought on by plasmogamy
meiosis- turns to haploid

254
Q

types of sexual reproduction; gametes of complementary mating types

A

planogametic copulation

255
Q

types of sexual reproduction; planogametic copulation; the gametes in a fusing pair are morphologically similar but physiologically distinct

A

isogamy

256
Q

types of sexual reproduction; planogametic copulation; one planogamy is larger in size; larger more active gamete and smaller female gamete

A

anisogamy

257
Q

types of sexual reproduction; planogametic copulation; motile gametes are release from male gametangium some reach the oogonium;large immotile female gametes and small motile male gametes

A

oogamy

258
Q

types of sexual reproduction; gametangia come in contact but do not fuse ; gametangy (ascomycota); male gamete is transferred to the female gamete via a fertilization tube

A

gametangial contact

259
Q

types of sexual reproduction; gametangiogamy (ascomycota); gametangia fuse and gives rise to a zygote that develops into a resting spore

A

gametangial copulation

260
Q

types of sexual reproduction; fusion of somatic cell during plasmogamy (ascomycota, basidiomycota)

A

somatogamy

261
Q

types of sexual reproduction; fusion of hyphal tips of two complementary mating types; receptive hypha and spermatia

A

spermatization

262
Q

general characteristics of algae

A

eukaryotic
unicellular, multicellular/filamentous, some colonial
cell wall is thin and rigid
mostly non-pathogenic
photosynthetic
some motile, some attached to substratum(benthic)

263
Q

site of CO2 fixation and starch formation in algae

A

pyrenoids

264
Q

organ for phototaxis in algae

A

eyespot/ stigma

265
Q

unicellular algae; model system for photosynthesis, flagellar movement, phototaxis, and cell-cell communication

A

Chlamydomonas

266
Q

pigments found in algae

A

chlorophylls
carotenoids (carotenes, xanthophylls)
phycobilins : phycoerythrobilin-red
phycouronilin- orange
phycoviolobilin- purple
phycocyanabilin/phycobiliverdin- blue

267
Q

Rhodophytes common traits

A

key genera- polysiphonia, cyanidium, galdiera;
habitat- salt water, few in freshwater and terrestrial; reddish color due to phycoerythrin, chlorophyll a, phycobiliproteins, phycocyanin, allophycocyanin;
mostly multicellular and non-motile
cell wall composed of cellulose, pectin, and carrageenan
reproduction; asexual spores and sexual gametes

268
Q

Chlorophytes common traits

A

key genera; chlamydomonas, volvox
habitat; fresh water, salt water, soil, bark of tree (lichens)
principal pigments: chlorophyll a and b, carotenes, xanthophylls
unicellular to filamentous to colonial, multicellular
storage product: starch-glucose polymer
cell wall: cellulose, pectin
reproduction; asexual fission, spores, sexual
motility; mostly non-motile (except for chlorococcales), some reproductive structures are motile

269
Q

the six recognized supergroups of eukarya

A

archaeplastida
rhizaria
chromalveolata
excavata
amoebozoa
opisthokonta

270
Q

general characteristics of protists

A

eukaryotic
mostly heterotrophs
unicellular, colonial, multicellular
heterotrophic via endocytosis
free-living (aquatic, terrestrial), symbiotic (parasitic, mutualistic)

271
Q

engulfing and digesting of microscopically visible particles

A

phagocytosis

272
Q

engulfing and digesting of dissolved particles, “cell drinking”

A

pinocytosis

273
Q

algal morphology; vegetative form, metabolically active invasive stage

A

trophozoite

274
Q

algal morphology; dormant yet infectious stage; protection against adverse conditions; site for nuclear reorganization and cell division; means of transfer between hosts

A

cyst

275
Q

algal morphology; bands of protein inside the membrane that adds rigidity to cell

A

pellicle

276
Q

algal morphology; for phtototaxis

A

chloroplast

277
Q

algal morphology; semisolid/ gelatinous cytoplasm that imparts rigidity to cell

A

ectoplasm

278
Q

algal morphology; inside the ectoplasm that contains most of the organelles

A

endoplasm

279
Q

algal morphology; nuclei; regulates somatic functions (locomotion, osmoregulation, cell regeneration, feeding) by directing protein synthesis

A

macronucleus

280
Q

algal morphology; nuclei; functions in sexual reproduction, regeneration of macronucleus

A

micronucleus

281
Q

algal morphology; vacuoles; sites of food digestion; fuses with lysosymes

A

food vacuole

282
Q

algal morphology;vacuoles; for excretion, osmoregulation, and water balance

A

contractile vacuole

283
Q

algal morphology; locomotory organelles; blunt lobe-like extensions of the cytoplasm

A

pseudopodia (false feet)

284
Q

algal morphology;locomotory organelles; thin, long whip- like projections arising from the surface of the cell

A

flagella

285
Q

algal morphology;locomotory organelles; shorter more numerous than flagella

A

cilia

286
Q

algal morphology; shell composition of foraminiferans

A

calcium carbonate

287
Q

algal morphology; shell composition of radiolarians and diatoms

A

silica

288
Q

algal nutrition; employs phagocytosis

A

holozoic

289
Q

algal nutrition; nutrient cross plasma membrane by pinocytosis, diffusion or carrier-mediated transport

A

saprozoic

290
Q

algal reproduction; exchange of genetic material from one cell to another

A

sexual

291
Q

algal reproduction; asexual; cell divides evenly to form two new cells

A

fission

292
Q

algal reproduction; asexual; cell divides unevenly

A

budding

293
Q

algal reproduction; asexual; nucleus of the cell divides multiple times before the rest of the cell divides

A

schizogony- multiple fission

294
Q

algal classification; key genera- giardia, trichomonas, typanosoma, euglena; chemoorganotrophs, phototrophs, anaerobic; motile via flagella; groups- diplomonads, parabasalids, kinetoplastids, euglenids; habitat- anoxic (animal intestines for example). freshwaer

A

excavata

295
Q

algal classification; excavata; 2 nuclei of 2 equal size, each with 4 associated flagella with mitosomes; some free- living, most commensal; can be parasitic and anaerobic

A

diplomonads

296
Q

algal classification; excavata; diplomonads; causative agent for giardiasis

A

Giardia intestinalis/ Giardia lamblia

297
Q

algal classification; excavata; parabasal bodies for structural support, lacks mitochondria; w hydrogenosome( site for pyruvate metabolism);anaerobic; binary fission; parasites/ commensals in intestines and urogenital tract

A

Parabasalids

298
Q

algal classification; excavata; parabasalids; causative agent of trichomoniasis; checked via pap smear

A

trichomonas vaginalis

299
Q

algal classification; excavata; contains kinetoplast inside mitochondrion; with single flagellum; free-living in soil or aquatic envi; primarily feed on bacteria; some are parasites in humans and vertebrate animals

A

kinetoplastids

300
Q

algal classification; excavata; kinetoplasids; causative for african sleeping sickness; tsetse fly vector

A

tryponosoma brucei

301
Q

algal classification; excavata; kinetoplastids; causative of leishmaniasis; sandfly vector

A

leishmania

302
Q

algal classification; excavata; nonpathogenic; chemo and phototrophic with chloroplasts; aquatic marine and freshwater; can lose chloroplasts in darkness and exists as chemoorganotrophs; feed on bacterial cells by phagocytosis; some are symbionts

A

euglenids

303
Q

algal classification; key genera- gonyaulaz, plasmodium, paramecium; presence of alveoli (cytoplasmic sacs located under cytoplasmic membrane that can function as armor plates (dinoflagellates) and help in maintaining influx and efflux of osmotic balance); groups - ciliates, dinoflagellates, apicomplexans

A

alveolata

304
Q

algal classification; alveolata; posses cilia for motility; paramecium uses cilia for motility and obtaining food; 2 micro and macronuclei; some symbiotic and parasitic

A

ciliates

305
Q

algal classification; alveolata; ciliates; causative of balantidiasis

A

balantidium coli

306
Q

algal classification; alveolata; marine and fresh water alveolates; posses 2 flagella; some symbiotic with animals that form coral reef, some free-living can bioluminescence; some are toxic

A

dinoflagellates

307
Q

algal classification; alveolata;dinoflagellates; example of bioluminescent species

A

Pyrodinium bahamense

308
Q

algal classification; alveolata; dinoflagellates; causes paralytic shellfish poisoning and red tide

A

Gonyaulax

309
Q

algal classification; alveolata; nonphototrophic obligate parasites; nonmotile adults; nutrient are taken up in soluble form across cytoplasmic membrane; produces sporozoites (functions in transmission), contains apicoplasts (degenerate chloroplasts)

A

apicomplexans

310
Q

algal classification; alveolata;apicomplexans; causative of malaria; anopheles mosquito vector

A

plasmodium vivax, p. falciparum

311
Q

algal classification; alveolata;apicomplexans; causative of toxoplasmosis; infection via eating raw or undercooked meat; sexual stage occurs in cat; asexual occurs in warm-blooded animals

A

toxoplasma condii

312
Q

algal classification; key genera phyotphthera, nitzschia, ochromonas, macrocystis; chemororganotrophic and phototrophic micro-macroorganisms; flagellated with short hairlike extensions; groups- diatoms, oomycetes, golden and brown algae

A

stramenopiles

313
Q

algal classification; stramenopiles; unicellular, phototrophic microbial eukaryotes; produce cell wall made of silica; protects against predation; varied shapes and can be highly ornate; has frustule remains after cell dies (external structure, eukaryotic fossil)

A

diatoms

314
Q

algal classification; stramenopiles; water molds; cell wall made of cellulose; flagellated cells; plant pathogens

A

oomycetes

315
Q

algal classification; stramenopiles; oomycetes; causative of late blight disease on potatoes

A

Phytophthora infestans

316
Q

algal classification; stramenopiles; chrysophytes mostly unicellular and freshwater phototrophs; some chemoorganotrophs ( via phagocyt or transpot of soluble organic comps across cell membrane); motile 2 flagella; chloroplast dominated by brown colored carotenoid-fucoxanthin; ie ochromonas w 1-2 chloroplasts only

A

golden algae

317
Q

algal classification; stramenopiles; primarily marine and multicellular; macroscopic; brown/ green depending on amount of fucoxanthin produces; i.e. macrocystis- giant kelp up to 50 m in length

A

brown algae

318
Q

algal classification; threadlike cytoplasmic extrusions (pseudopodia); nonphotosynthetic; many produce shells or skeletons; groups- chlorarachniophyta, radiolaria, foraminifera

A

Rhizaria

319
Q

algal classification; Rhizaria; freshwater and marin amoeba-like phototrophs; some ingests bacteria and smaller protists; develop flagellum for dispersal; chloroplasts with 4 membranes; ie chlorarachnion. lotharella, bigelowiella

A

chlorarachniophyta

320
Q

algal classification; Rhizaria;exclusive marine amoeba-like microorganisms; form shell-like structure called tests (made of calcium carbonate) that are heavy making mcgs sink to the bottom to feed on bacteria, protsits and remains of feed on dead organisms; test is resistant to decay and are readily fossilized; can form symbiotic relationship with algae

A

foraminifera

321
Q

algal classification; Rhizaria; chemoorganotrophic, mostly marine eukaryotes; consume bacteria and particulate organic matter; can form symbiotic relationship with algae; possess tests with radial symmetry; tests made of silica in one fused piece; needle-like pseudopodia; reproduce by fission

A

radiolaria

322
Q

algal classification; key genera- amoeba, entamoeba, physarum, dictyostelium; terrestrial and aquatic protists; lobe-shaped pseudopodia for movement and feeding; groups; gymnamoebas;entamoebas, plasmodial and cellular slime molds

A

amoebozoa

323
Q

algal classification; amoebozoa; free living; aquatic and soil envi; exhibit and amoeboid movement using pseudopodia; feed by phagocytosis on bacteria, protists, and particulate organic matter

A

gymnamoebas

324
Q

algal classification; amoebozoa; parasites of vertebrates and invertebrates; oral cavity or intestinal tract of animals; exhibit amoeboid movement using pseudopodia; ie. causative of amebic dysentery- e. histolytica, only known pathogenic species

A

entamoebas

325
Q

algal classification; amoebozoa; motile; plasmodial (vegetative forms are masses of protoplasm- physarum) & cellular slime molds (vegetative forms are single amoebae- Dictyostelium discoideum ); live on decaying plant matter- w haploid and diploid stages

A

slime molds