Bacteria (Bugs) Flashcards
description of clostridium difficile
Description: gram positive rod, anaerobic, tissue-damaging exotoxin, spore-forming
Pseudomonas aeruginosa
Description: gram negative bacillus, obligate aerobe; exotoxin A
Encounter/ Entry: oxidase & catalase positive; motile; pilli for adhesion to epithelial; drug efflux pumps on outer membrane
Establish Infection: capsule & tight outer membrane; toxin ribosylates target- inhibits protein synthesis; type III secretions
Multiplication/Tissue Damage: biofilm production (antiphagocytosis); proteases; can get to bone & joint ; membrane damaging toxins;
Common Disease Types: otitis externa, hot tub dermatitis/folliculitis, endocarditis (esp IV drug users); keratitis, bone & joint infections; CF much more susceptible; NOSOCOMIAL INFECTIONS; sneaker osteomyelitis (especially in diabetic); often complication of burn injuries; number one cause of nosicomial pneumonia; respiratory failure in CF
Transmission: thrives in aquatic environments; found in soil; occasionally on skin: ear canal; hot tubs, sneakers
Other Notes: produces blue/green pigment & fruity odor; affects diabetics, burn victims, IV drug users; catheter/UTI infections; hot tub folliculitis; ecythema gangrenosum
Diagnosis/treatment: pip/tazo (maybe fluoroquinolones or aminoglycosides); has beta-lactamase (resistant to B-lactams); diagnosis via culture
transmission of treponema pallidum
Transmission: human-human; close sexual contact; can transmit mother-fetus if mother has bacteremia
cause of syphilis
identifying qualities of staph epidermidis
Other notes: catalase positive; coagulase negative
immunization for bordetella pertussis
Immunization: DTaP toxoid
description of pseudomonas aeruginosa
Description: gram negative bacillus, obligate aerobe; exotoxin A
description of haemophilus influenzae
(most importantly: encapsulated type B- Hib)
Description: gram negative coccobacillus
Disease types associated with borrelia burgdorferi
Disease Types: LYME DISEASE; characteristic target rash- erythema migrans; neurologic symptoms (Bell’s Palsy, confusion)
bordetella pertussis
Description: gram negative coccobacillus, aerobe, 3 exotoxins: pertussis toxin, adenylate cyclase; tracheal cytotoxin
Encounter: inhaled from cough-generated droplets from infected person
Infection: attaches to ciliated cells of respiratory epithelium
Spread/Damage: toxins kill epithelial cells, increase cAMP
Transmission: only found in humans with active disease
**spasmodic, Whooping Cough, abx don’t cure symptoms if epithelial damage is done
Immunization: DTaP toxoid
how is c diff encountered
Encounter: part of normal flora of intestine; often less competition when normal flora wiped out by abx
how is treponema encountered?
Encounter/Entry: human is only known host—enters mucous membranes or small abrasions in skin via sexual contact
cause of syphilis
other notes about mycobacterium leprae
Other Notes: thrives in cold temps (explains why it favors extremities)
how does bordetella pertussis infect?
Infection: attaches to ciliated cells of respiratory epithelium
diagnosis/treatment of brucella
Diagnosis/treatment: dx: blood or tissue biopsy (but not all cases are bacteremic); tetracyclines (doxy); rifampin; need multiple trugs & long course since such slow growth rate
encounter/entry of pseudomonas aeruginosa
Encounter/ Entry: oxidase & catalase positive; motile; pilli for adhesion to epithelial; drug efflux pumps on outer membrane
transmission of mycoplasma pneumoniae
Transmission: occurs in young adults in close quarters (only human-human); occurs in outbreaks/communities
multiplication/tissue damage from yersinia pestis
Multiplication/Tissue Damage: major virulence due to suppression of early inflammatory response (type III secretion system + plasminogen activator); able to travel systemically- sudden onset of severe symptoms; have
vaccination of mycobacteria TB
Vaccination: diagnose: TST or blood test, CXR; positive skin test if T cell is responding to TB– give induration; all patients with active TB should be offered directly observed therapy (DOT) because partial treatment leads to resistance; treatment: RIPE (rifampin, isoniazid, pyraxinamide, ethambutol); INH for latent TB
common disease types associated with chlamydia trachomatis
Common Disease Types: sexually transmitted: GU trac, recurrent– PID, (serovars D-K), trachoma (eye infection)– main cause of blindness (serovars A,B,C); lymphogranuloma venereum LGV (serovars L1-L3)- also STD; passed on to fetus during birth
Reiter’s syndrome: uveitis, urethraitis, arthritis
diagnosis/treatment of listeria monocytogenes
Diagnosis/treatment: diagnose: blood or CSF culture; treat: ampicillin or penicillin
transmission of bacillus anthracis
Transmission: normal pathogen of grazing ungulates (encountered in soil)– cause a lot of bleeding so that in nature, can exit host as blood & sporulate; **can be aerosolized (biothreat)
how does haemophilus influenzae spread/damage the host?
Spread/Damage; local infection: sinusitis, otitis media, epiglottitis
systemic: capsule, LPS causes proinflammatory damage (most damage due to inflammatory response)
description of chlamydia trachomatis
Description: poor gram stain (cell wall doesn’t have muramic acid); obligate intracellular
encounter/entry of EIEC
EIEC: enteroinvasive e. coli
Encounter/ Entry: not motile, lactose negative, binds to shigella antigens, contains virulence plasmid
multiplication/tissue damage from campylobacter jejuni
Multiplication/Tissue Damage: can be invasive leading to bacteremia
salmonell enterica
Description: gram negative rod, facultative anaerobe (intracellular: macrophages)
Encounter/ Entry: (typhoid fever: only human-human); GI (food-human)
Establish Infection: invades epithelium via membrane ruffles & type III secretion system; remains in phagosomes; capsule, motile
Multiplication/Tissue Damage: strong inflammatory response & type III secretions; recruit neutrophils); thypoid: seeding of gall bladder –> common shedding/infection
Common Disease Types: gastroenteritis (salmonellosis)- most common foodborne illness in US-inflammatory diarrhea (leukocytes in stool), enteric (typhoid) fever– only human-human pathogen, rose spots; sustained bacteremia (vascular infection), often in aorta; #1 cause of osteomyelitis in sickle cell disease; pea soup diarrhea
Transmission: enteric bacteria (colonizer) - but NOT component of human normal flora; food-human (can be human-human)
Host Defense: invades lymphatics in colon (in macrophages); inflammatory responses possible (reactive arthritis, IBS)
Other Notes: acid labile (degraded in stomach)–need high dose to cause infection; closely related to E. coli
Vaccination: vaccination against typhoid fever (maybe 20% effective)
transmission of brucella
Transmission: direct contact with livestock or unpasteurized dairy (zoonic– accidental pathology in humans)
host defense with salmonella enterica
Host Defense: invades lymphatics in colon (in macrophages); inflammatory responses possible (reactive arthritis, IBS)
how is neisseria gonorrhoeae encountered/enter
Encounter/ Entry: human only known host; enters through vagina (sexually transmitted); mediated by (type IV) pilli & opacity(opa) proteins
diagnosis/treatment of helicobacter pylori
Diagnosis/treatment: diagnosis: endoscope/urea breath test, serology, fecal antigen test, C-urea breath test; treatment for cancer/peptic ulcers: combo of PPI, amox & macrolide (clarithromycin)
transmission of shigella
Transmission: enteric bacteria; fecal-oral (person-person) *most contagious bacterial diarrhea
helicobacter pylori
Description: gram negative comma (curved rod); facultative anaerobe with cytotoxins
Encounter/ Entry: commensal of human stomach
Establish Infection: slow growing; adhesins help bind to gastric epithelia; urease– lyses & increases pH so it can survive better; motile with flagella
Multiplication/Tissue Damage: persistent infection (infeced for decades); urease; non-inflammatory LPS sometimes
Common Disease Types: chronic gastritis, cause of most duodenal ulcer, gastric ulcer; risk for gastric adenocarcinoma & MALToma
Transmission: pathogen/commensal of human stomach (pylorus); gastric-oral/fecal-oral/oral-oral
Other Notes: urease positive; oxidase positive
Diagnosis/treatment: diagnosis: endoscope/urea breath test, serology, fecal antigen test, C-urea breath test; treatment for cancer/peptic ulcers: combo of PPI, amox & macrolide (clarithromycin)
how does listeria monocytogenes establish infection
Establish Infection: B hemolytic; motile (comet-like tails); facultative intracellular; projections into neighbor cells
multiplication/tissue damage caused by neisseria meningitidis
Multiplication/Tissue Damage: inflammation–> leaky capillaries; meningococcemia; meningitis, bacteremia;able to survive in bloodstream; can lead to shock; phase & antigenic variation
other notes about bacteroides fragilis
Other Notes: contributes to beneficial role of normal flora
host defense with listeria monocytogenes
Host Defense: after initial entry, bacterium remains intracellular (usually controlled by cell-mediated immunity & CD8 T Cells- antibody response is irrelevant)
treatment of rickettsia rickettsi
Treatment: doxycycline
description of neisseria meningitidis
Description: gram negative diplococcic, facultative intracellular
treatment for chlamydia trachomatis
doxy, use ceftriazone to also treat comorbid gonorrhea (
often found together, thru sexual contact)
diagnosis of treponema pallidum
Diagnosis: through PCN
cause of syphilis
common disease types of klebsiella
Common Disease Types: common cause of nosocomial infections; can cause lobar pneumonia (currant jelly sputum); UTI
how is clostridium tetani encountered?
Encounter: infection via contamination of wound
how does bordetella pertussis spread/cause damage?
**spasmodic, Whooping Cough, abx don’t cure symptoms if epithelial damage is done
Spread/Damage: toxins kill epithelial cells, increase cAMP
what is the representative gram negative rod we think of first in nosocomial (hospital-acquired) infections?
pseudomonas aeruginosa
why?
-resistant to many abx due to tight porin channels & efflux pumps
description of neisseria gonorrhoeae
Description: gram negative, diplococci, facultative intracellular
other notes about mycobacteria TB
Other Notes: symptoms: cold sweats, cachetic,; fear of young people with TB developing meningitis
multiplication/damage of ETEC
ETEC: enterotoxigenic e coli
Multiplication/Tissue Damage: increased cAMP lead to watery diarrhea, dehydration, electolyte imbalance
transmission of yersinia pestis
Transmission: highly transmissable when aerolized (biothreat); usually arthropod (fleas)
description of mycoplasma pneumoniae
Description: gram indeterminate (no cell wall; cell membrane has sterols); pleomorphic shape; small size & small genome
how is clostridium botulinum encountered?
Encounter: infants: spores in food (honey); adults: toxin in food (canned or seafood)
chlamydia trachomatis
Description: poor gram stain (cell wall doesn’t have muramic acid); obligate intracellular
Encounter/entry: sexual contact; elementary body encounter epithelium
Establish infection: epithelial cells- reticular bodies directly damage epithelial barriers; type III secretion system ; RBs convert to Ebs and infect more
Multiplication/Tissue damage: type III secretion; induce inflammation
Common Disease Types: sexually transmitted: GU trac, recurrent– PID, (serovars D-K), trachoma (eye infection)– main cause of blindness (serovars A,B,C); lymphogranuloma venereum LGV (serovars L1-L3)- also STD; passed on to fetus during birth
Transmission: can be transmitted to fetus during birth (conjunctivitis & pneumonia); Reiter’s syndrome: uveitis, urethraitis, arthritis
Notes: bacteria exist as elementary (transmissable/infectious) form and reticular form (replicative within cells); cell wall lacks muramic acid
Treatment: doxy; use ceftriaxone to also treat gorrorhea (often found together, thru sexual contact)
encounter/entry of listeria monocytogenes
Encounter/ Entry: oral transmission; uptake by antigen-sampling M cells & macrophages, ruptures macrophages
neisseria gonorrhoeae
Description: gram negative, diplococci, facultative intracellular
Encounter/ Entry: human only known host; enters through vagina (sexually transmitted); mediated by (type IV) pilli & opacity(opa) proteins
Establish Infection: mucosal colonization (women)-attaches to columnar epithelial in cervix ; ascends from cervix (women have higher risk of ascendance)
Multiplication/Tissue Damage: salpingitis, PID; persistent infection leading to systemic bacteremia- can spread to skin/joints; IgA protease, iron acquisition, evade phagocytes; can do phase variation & antigenic variation; serum resistant (resistant to serum complement)
Common Disease Types: can have asymptomatic carriage; PID- white pirulent vaginal discharge; PID can spread to peritoneum (Fitz Hugh Curtis Syndrome via violin string adhesions); congenital pirulent conjunctivitis is mother pass to baby (EARLY ONSET); DCI (disseminated gonocococcal infection– bacteremia); can also cause proctitis, conjunctivitis, pharyngitis
Transmission: human only host (asymptomatic infection possible); sexually transmitted
Host Defense: barriers of cervical infection: cervical canal, mucus plug, hormones
Other Notes: growth on VPN agar & chocolate agar; oxidase positive
Diagnosis/treatment: ceftriaxone (but also administer macrolide or doxy to cover chlamydia too)
Vaccination: no
Transmission of streptococcus pneumoniae
Transmission: reservoir= nasopharynx
immunization for corynebacterium diptheriae?
Immunization: DTaP toxoid
Common disease types associated with legionella pneumophila
Common Disease Types: Legionaires: walking pneumonia, patchy CXR with consolidation in one lobe, paired with diarrhea, hyponatremia, neuro symptoms (HA/confusion); pontiac fever
how does francisella tularenis establish infection
Establish Infection: short survival in air but low dose required for infection; highly invasive
other notes about listeria monocytogenes
Other Notes: pregnant women (1/3 of infections); catalase positive; survive in cold environments
how does corynebacterium diphtheriae spread/cause damage?
Spread/damage: all of pathology due to toxin; blocks protein synthesis; toxin spreads systemically– pseudomembranes & edema (bull’s neck)
ETEC (enterotoxigenic e. coli)
Description: (E COLI) gram negative rod, facultative anaerobe; heat labile toxin & heat stable toxin
Encounter/ Entry: contaminated food/water; adheres to epithelium via pili
Establish Infection: colonizes intestinal tract; toxin cause increased cAMP
Multiplication/Tissue Damage: increased cAMP lead to watery diarrhea, dehydration, electolyte imbalance
Common Disease Types:“traveler’s” diarrhea; watery diarrhea; self-limited
Transmission: enteric bacteria; transmitted via water (Mexico)
Host Defense: develop immune response to the heat labile toxin; if in endemic area- can form immunity
Other Notes: like less virulent v. cholerae (heat-labile toxin)
treatment of mycoplasma pneumoniae
Treatment: (No cell wall) macrolides
description of bacillus anthracis
Description: gram positive rods (in chains); obligate aerobe; spore-former (2 toxins: Lethal Factor & Edema Factor); since makes spores– biothreat
encounter/entry of mycoplasma pneumoniae
Encounter/entry: human only known reservoir; droplets
other notes about EHEC
EHEC: enterohemorrhagic e coli
Other Notes: only e coli that doesn’t ferment sorbitol; 0157:H7 serotype causes outbreaks; occurs in US!
how is the host defense involved in borrelia burgdorferi
Host Defense: complement activated, chemokines released by skin cells, antibody response (against surface lipoproteins—helps with diagnosis); phase variation can occur in lipoproteins
cause of Lyme Disease
transmission of rickettsia rickettsi
Transmission: spread by dermacentor tick; primary mammal host of these ticks: rodents, dogs
multiplication/tissue damage from klebsiella
Multiplication/Tissue Damage: growth can trigger necrosis, inflammation & hemorrhage
common disease types of neisseria meningitidis
Common Disease Types: asymptomatic carriers spread the disease; Waterhouse-Friederichson Syndrome (adrenal hemorrhage); common to see petichiae rash (due to hemorrhage); one of principle bacterial agents of CNS disease; can cause otitis media, conjunctivitis,s eptic arthritis, urethritis, purulent pericarditis
encounter/entry of EHEC
EHEC: enterohemorrhagic e coli
Encounter/ Entry: low infectious dose; contaminated food (beef); can transmit human-human; adheres to epithelium of large bowel
how does yersinia pestis establish infection?
Establish Infection: highly invasive , can survive in macrophages (intracellular & extracellular bug); can really cause bacteremia; peptide capsule
how does mycobacterium leprae establish infection?
Establish Infection: tuberculoid leprosy: within macrophages (strong TH1 response); lepromatous leprosy: (TH2 cells involved)bacteria not maintained in macrophage
corynebacterium diphtheriae
Description: gram positive rod, anaerobe, AB exotoxin; no spores
Encounter: oral secretions
Infection: colonizes pharyngeal epithelium
Spread/damage: all of pathology due to toxin; blocks protein synthesis; toxin spreads systemically– pseudomembranes & edema (bull’s neck)
Transmission: only reservoir: throat of man
Immunization: DTaP toxoid
klebsiella
Description: gram negative rod
Encounter/ Entry: often intro by medical manipulation (IV, cath); normal GI flora
Establish Infection: capsule (K antigen), immotile; diverse antigens
Multiplication/Tissue Damage: growth can trigger necrosis, inflammation & hemorrhage
Common Disease Types: common cause of nosocomial infections; can cause lobar pneumonia (currant jelly sputum); UTI
Transmission: enteric bacteria (GI tract); common in skin, pharynx
Other Notes: mutli-drug resistance (some produce extended spectrum beta lactamase ESBL); ferment lactose; urease positive
description of streptococcus pneumoniae
aka Pneumococcus
Description: gram positive, diplococci
stages of lyme disease
(due to borrelia burgdorferi)
3 phases of Lyme Disease: Stage 1 (early infection, localized); Stage 2 (early infection, disseminated infection); Stage 3 (late infection; persistent infection; post-lyme (“chronic”)
description of francisella tularenia
Description: gram negative coccobacillus, facultative intracellular; **biothreat
Rickettsia rickettsi
Description: gram negative (but poorly stained), coccobacillus, obligate intracellular
Encounter/entry: arthropod vector for transmission
Establish Infection: pathogen of endothelium- spread by ticks, lysis of vascular endothelium (lead to leaky vessels), use host actin to provide motility & transfer to other cells
Multiplication/tissue damage: infection of endothelial cell, spread to neighboring cells- affected blood vessels hemorrhage
Common Disease Types: headache, fever, vasculitis; Rocky Mountain Spotted Fever: rash (due to hemorrhage) spreads from limbs to central; myalgias; disseminated coagulopathy
Transmission: spread by dermacentor tick; primary mammal host of these ticks: rodents, dogs
Other notes: geography plays a role- most prevalent in southeast US
Treatment: doxycycline
description of yersinia pestis
Description: gram negative; facultative anaerobe, no spores/toxins; **biothreat (plague)
common disease types from yersinia pestis
Common Disease Types: plague; ataxia caused by pain of bubos; can penetrate lungs (when human-human transmission occurs) causing bloody sputum (late stage); sepsis syndrome is primary COD; bubos (enlarged lymph node with tons of bacteria usually in axilla or groin)
how streptococcus pneumoniae encounters host
Encounter: nasopharyngeal colonization via respiratory droplets
how is clostridium perfringens encountered?
Encounter: contamination of wound (especially after abdominal surgery)
common diseases associated with chlamydia pneumoniae
Common disease types: pharyngitis, bronchitis, atypical pneumonia
other notes about helicobacter pylori
Other Notes: urease positive; oxidase positive
encounter/entry of salmonella enterica
Encounter/ Entry: (typhoid fever: only human-human); GI (food-human)
disease types involved with staph epidermidis
Disease Types: UTI, nosocomial bacteremia, endocarditis (especially on prosthetic valves), infections of prostheses/shunts/implants
how does chlamydia pneumoniae establish infection
Establish Infection: epithelial cells- reticular bodies directly damage epithelial barriers; type III secretion system ; RBs convert to Ebs and infect more
how does bacteroides fragilis multiply/cause tissue damage
Multiplication/Tissue Damage: produce B-lactamase
host defense involved in mycobacteria tuberculosis
Host Defense: environmental & genetic factors can predispose to TB; TNF inhibitor drugs can reactivate TB
description of salmonella enterica
Description: gram negative rod, facultative anaerobe (intracellular: macrophages)
description of EIEC
EIEC: enteroinvasive e. coli
Description: gram negative rod, facultative anaerobe, no toxins
how does clamydia trachomatis establish infection
Establish infection: epithelial cells- reticular bodies directly damage epithelial barriers; type III secretion system ; RBs convert to Ebs and infect more
description of staph aureus
Description: gram positive, clusters of cocci, aerobe
how does staphylococcus aureus establish infection?
Establish Infection: colonizes skin & nose, enters through break in skin
transmission of mycobacteria tubercluosis
Transmission: infectious aerosols (droplets) human-human
transmission of campylobacter jejuni
Transmission: zoonotic infections (fecal-oral); commensal of domestic animals’ GI tract; foodborne especially in summer
description of shigella
Description: gram negative, facultative anaerobe (cytoplasmic pathogen), shiga toxin
host defense & francisella tularenis
Host Defense: cell-mediated immunity (T cells) necessary to clear intracellular infection
Staphlococcus epidermidis
Description: gram positive, clusters of cocci
Encounter: normal skin flora (only pathogenic if on foreign body)
Establish Infection: biofilm, infections on prosthetic material/catheters
Disease Types: UTI, nosocomial bacteremia, endocarditis (especially on prosthetic valves), infections of prostheses/shunts/impants
Transmission: normal skin flora
Other notes: catalase positive; coagulase negative
disease/pathology seen with staphlyococcus aureus
Disease Types:
think pus: folliculitis, furuncles, impetigo, cellulitis, wound infetions– inflammatory response due to superantigens
- SSSS toxin: staph scalded skin syndrome
- TSST toxin: toxic shock syndrome
- enterotoxin: food poisoning (2-6 hours after ingestion)
- leukocidin toxin: factor seen in community- acquired MRSA
other notes about campyobacter jejuni
Other Notes: thermophilic; oxidase positive; bile salt resistant
how does campylobacter jejuni establish infection?
Establish Infection: motile, slow growing; grows in bile
treatment of infection of clostridium perfringens?Treatment: debridement, hyperbaric chamber
Treatment: debridement, hyperbaric chamber
listeria monocytogenes
Description: gram positive rod, cytoplasmic pathogen (intracellular)
Encounter/ Entry: oral transmission; uptake by antigen-sampling M cells & macrophages, ruptures macrophages
Establish Infection: B hemolytic; motile (comet-like tails); facultative intracellular; projections into neighbor cells
Multiplication/Tissue Damage: damage due to host resposne; spread via blood & macrophages
Common Disease Types: flu-like symptoms; can produce meningitis, sepsis;
Transmission: can contaminate refrigerated food (milk, soft cheese, meat); also in stool
Host Defense: after initial entry, bacterium remains intracellular (usually controlled by cell-mediated immunity & CD8 T Cells- antibody response is irrelevant)
Other Notes: pregnant women (1/3 of infections); catalase positive; survivie in cold environments
Diagnosis/treatment: diagnose: blood or CSF culture; treat: ampicillin or penicillin
Staphylococcus aureus
Description: gram positive, clusters of cocci, aerobe
Encounter: colonizes skin & nose
Establish Infection: colonizes skin & nose, enters through break in skin
Damage/Spread: B-hemolysis, IgG binding protein A in cell wall; secretes antigens
**catalase positive, coagulase positive (latex assay, clumping factor, Protein A)
Disease Types:
think pus: folliculitis, furuncles, impetigo, cellulitis, wound infetions– inflammatory response due to superantigens
- SSSS toxin: staph scalded skin syndrome
- TSST toxin: toxic shock syndrome
- enterotoxin: food poisoning (2-6 hours after ingestion)
- leukocidin toxin: factor seen in community- acquired MRSA
transmission of clostridium tetani?
Transmission: common in soil, spores survive for years
common disease types of neisseria gonorrhoeae
Common Disease Types: can have asymptomatic carriage; PID- white pirulent vaginal discharge; PID can spread to peritoneum (Fitz Hugh Curtis Syndrome via violin string adhesions); congenital pirulent conjunctivitis is mother pass to baby (EARLY ONSET); DCI (disseminated gonocococcal infection– bacteremia); can also cause proctitis, conjunctivitis, pharyngitis
how does borrelia burgdorferi establish infection?
Establish Infection: endoflagellum allows penetration of endothelium; motile; penetrate blood vessels
cause of Lyme Disease
diagnosis/treatment of mycobacteirum leprae
Diagnosis/treatment: lepromin skin test; treatment: multidrug therapy tuberculoid: dapsone & rifampin 6 months; lepromatous: these 2 + clofazamine for 2-3 years
treatment for streptococcus pyogenes
Treatment: penicillin, beta lactams, clinda, macrolides
Stages of Pneumococcal Pneumonia
(due to infection by streptococcus pneumoniae)
Exudative phase: alveoli fill with exudate
Early consolidation phase: chemotaxis
Hepatization phase: lung looks like a liver
Resolution phase: macrophages clear debris
description of mycobacterium leprae
Description:gram positive & acid fast (mycolic acid in waxy coat) rod; aerobe
how does treponema pallidum establish infection?
Establish infection: local infection (primary syphilis); motile
description of EHEC
EHEC: enterohemorrhagic e coli
Description: (E. COLI) gram negative rod, facultative anaerobe, shiga-toxin that inhibits translation
transmission of mycobacterium leprae
Transmission: human-human; nasal secretions; main reservoir is the armadillo in the US, grows in footpads of immunodeficient mice too
description of ETEC
ETEC: enterotoxigenic e coli
Description: (E COLI) gram negative rod, facultative anaerobe; heat labile toxin & heat stable toxin
common disease types from listeria monocytogenes
Common Disease Types: flu-like symptoms; can produce meningitis, sepsis;
transmission of borrelia burgdorferi
Transmission: deer/mice to tick à humans; can pass transplacentally (congenital)
cause of Lyme Disease
description of vibrio cholerae
Description: gram negative comma (curved rod), facultative anaerobe; toxin-mediated disease via enterotoxin
how does neisseria gonorrhoeae multply/cause tissue damage?
Multiplication/Tissue Damage: salpingitis, PID; persistent infection leading to systemic bacteremia- can spread to skin/joints; IgA protease, iron acquisition, evade phagocytes; can do phase variation & antigenic variation; serum resistant (resistant to serum complement)
host defense & bacillus anthracis
Host Defense: inflammation suppressed
encounter/entry of neisseria meningitidis
Encounter/ Entry: human only host; enter through upper respiratory tract(requires close contact) ; pili and opa mediated attachment
transmission of e coli
Transmission: enteric bacteria- COMMENSAL; fecal-oral transmission
other notes about e coli
Other Notes: can ferment lactose; most abundant facultative anaerobe in the gut
EPEC (enteropathogenic e. coli)
Description: gram negative rod, facultative anaerobe, no toxins
Encounter/ Entry: adheres to epithelium via pili in small intestine
Common Disease Types: diarrhea (not bloody) with mucus; malaise; vomiting
Other Notes: just like EHEC, but happens in small intestine without toxin
host response involved with legionella pneumophila
Host Response: host response/ inflammation is much of damage
how does mycoplasma pneumoniae establish infection?
Establish Infection: adhere to respiratory epithelium; slow growing (1-3 week incubation); stays localized in upper respiratory tract
how does streptococcus pneumoniae spread/cause damage?
Spread/Damage: spreads to lower respiratory tract, attaches via adhesins, can undergo phase variation (less susceptible to immunity)
*most common cause of community acquired pneumonia; can cause pneumococcal meningitis
*bile sensitive
diagnosis/treatment of borrelia burgdorferi
Diagnosis/Treatment: diagnosis through clinical presentation & serology; treatment with doxy, amoxicillin, ceftriaxone
mycoplasma pneumoniae
Description: gram indeterminate (no cell wall; cell membrane has sterols); pleomorphic shape; small size & small genome
Encounter/entry: human only known reservoir; droplets
Establish Infection: adhere to respiratory epithelium; slow growing (1-3 week incubation); stays localized in upper respiratory tract
Multiplication/tissue damage: no capacity for invasive disease; blocks ciliary action; mononuclear (monocyte) infiltrate – typical pneumonia show neutrophil infiltrate ;IgM Cold agglutinins
Common Disease Types: walking pneumonia, patchy CXR that looks worse than clinical manifestation
Transmission: occurs in young adults in close quarters (only human-human); occurs in outbreaks/communities
Treatment: (No cell wall) macrolides
Mycobacterium tuberculosis
Description: acid fast rod; aerobe
Encounter/ Entry: infectious aerosols, reach alveoli; interacts with alveolar macrophage
Establish Infection: lives within macrophage in alveoli- don’t allow phago-lysosome fusion; slow-growing within macrophages (no symptoms yet)
Multiplication/Tissue Damage: replicate in lungs, can spread via RES; grows slowly; cell envelope has thick waxy layer (lipids, porins); secretion system (not Type III or iV, but similar) (damage is immune mediated) ; able to eat host membranes
Common Disease Types: TB; Many outcomes after infection (infection is not the same as active disease): Acute Infection (pre-symptomatic); stable control of infection (latent) (never symptoms, skin test positive- Cell-mediated immunity-CD4T cells & granuloma); primary disease (pathology after months); latent can be reactivated;Miliary TB disseminated to body, lesions look like millet seeds) ;active TB (caseous necrosis of granuloma)
Transmission: infectious aerosols (droplets) human-human
Host Defense: environmental & genetic factors can predispose to TB; TNF inhibitor drugs can reactivate TB
Other Notes: symptoms: cold sweats, cachetic,; fear of young people with TB developing meningitis
Diagnosis/treatment: diagnose: TST or blood test, CXR; positive skin test if T cell is responding to TB– give induration; all patients with active TB should be offered directly observed therapy (DOT) because partial treatment leads to resistance; treatment: RIPE (rifampin, isoniazid, pyraxinamide, ethambutol); INH for latent TB
Vaccination: diagnose: TST or blood test, CXR; positive skin test if T cell is responding to TB– give induration; all patients with active TB should be offered directly observed therapy (DOT) because partial treatment leads to resistance; treatment: RIPE (rifampin, isoniazid, pyraxinamide, ethambutol); INH for latent TB
encounter of staphylococcus aureus
Encounter: colonizes skin & nose
Brucella
Description: gram negative, coccobacillus, facultative intracellular
Encounter/entry: ingestion (usually unpasteurized dairy product)/direct contact with animal
Establish Infection: grows within macrophages, but can spread very quickly; inhibits fusion of endosome & lysosome
Multiplication/damage: noncaseating granulomas; can cause systemic disease; spreads through RES
Common disease types: undulant fever; anorexia, liver & splenic involvement; osteomyeltis;
Transmission: direct contact with livestock or unpasteurized dairy (zoonic– accidental pathology in humans)
Diagnosis/treatment: dx: blood or tissue biopsy (but not all cases are bacteremic); tetracyclines (doxy); rifampin; need multiple trugs & long course since such slow growth rate
escherichia coli
Description: gram negative rod; facultative anaerobe; LPS exotoxin **serotyping antigens is helpful for pathogenic straings (antigens: O, H, K)
Encounter/ Entry: fecal-oral; doesn’t enter cytoplasm; pili, hemolysin,
Establish Infection: capsule with K antigen; pili
Multiplication/Tissue Damage: #1 cause UTI, #1cause gram negative sepsis; neonatal meningitis due to bacteremia in infants
Common Disease Types: E coli is most frequent cause of UTI (UPEC species); also cause neonatal meningitis
Transmission: enteric bacteria- COMMENSAL; fecal-oral transmission
Other Notes: can ferment lactose; most abundant facultative anaerobe in the gut
how does helicobacter pylori establish infection
Establish Infection: slow growing; adhesins help bind to gastric epithelia; urease– lyses & increases pH so it can survive better; motile with flagella
yersinia pestis
Description: gram negative; facultative anaerobe, no spores/toxins; **biothreat
Encounter/ Entry: human-human when aerosolized; bite of infected fleas (vector/arthropod)
Establish Infection: highly invasive , can survive in macrophages (intracellular & extracellular bug); can really cause bacteremia; peptide capsule
Multiplication/Tissue Damage: major virulence due to suppression of early inflammatory response (type III secretion system + plasminogen activator); able to travel systemically- sudden onset of severe symptoms; have
Common Disease Types: plague; ataxia caused by pain of bubos; can penetrate lungs (when human-human transmission occurs) causing bloody sputum (late stage); sepsis syndrome is primary COD; bubos (enlarged lymph node with tons of bacteria usually in axilla or groin)
Transmission: highly transmissable when aerolized (biothreat); usually arthropod (fleas)
Host Defense: inflammation suppressed
Diagnosis/treatment: treatment has to be inititated within 24 hours from onset of symptoms