Antigen Processing and Presentation Flashcards

1
Q

What are the three interactions necessary for T cell activaiton?

A

TCR/antigen
CD4 or CD8 stabilization
CD28/BL7

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

If a T cell recognizes antigen, but doesn’t receive the costimulation, what happens to the T cells?

A

It undergoes anergy - it will become inactivated or die

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

After activation, in time the CD28 will transform to what protein? What does this cause?

A

CTLA-4

It will still bind BL7 on the APC, but instead of this resulting in activation of the T cell, it will cause inhibition of the T cell - this is a “brake” system for the cellular response

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Why are dendrites considered the “profession” APCs?

A

Because they constitutively express both MHC class 2 and costimulators

Macrophages need to be activated by phagocytosis to express both

B cells constitutively express MHC 2, but needs to be activated by antigen binding to antibody before they express costimulatory molecules

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Presentation on MHC class 1 molecules is through what pathway?

A

cytosolic pathway

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What sort of antigen is presented on MHC 1?

A

endogenous antigen - can either be healthy host antigen or viral antigen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

How are proteins degraded for presentation in the cell during the cytosolic pathway?

A

proteins are tagged with Ub

The Ub is recognized by the 19S “lid” on the proteosome, where the protein is then degraded

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

How does the constitutive proteasome becaomse the immunoproteosome? Is it more or less efficient than the regular proteasome?

A

When the cell is stimulated with IFN gamma or TNF alpha (like when the cell is infected)

it’s more efficient because it will load peptides on MHC 1 faster through association with the TAP protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

Where are the MHC 1 molecules synthesized?

A

RER

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

How do the peptides from the proteosome get into the RER where the MHC is?

A

THey bind to a heterodimer complex of TAP1 and TAP2 located in the RER membrane, which facilitates the passage of the peptides into the lumen where loading onto MHC can take place

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

TAP has an affinity for peptides of what size?

A

8-16 amino acids, but really likes 9 amino acids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What molecules does the final trimming of the peptides before presentation?

A

ERAAP (ER-associated aminopeptidase) in the lumen of the RER

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

How does the MHC form in the membrane of the RER?

A
  1. first you get expression of the alpha chain and insertion of it intot he RER membrane
  2. the alpha chain binds to calnexin, which stabilizes it temporarily untli the alpha chain is in the appropriate comformation to bind to the B2 microblogulin
  3. Then calnexin dissociates and the alpha chain binds the B2 microglobulin
  4. Tapasin brings in the TAP1 and TAP2 structures close to the MHC
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What “antigens” will be presented MHC 1 when the cell has abberant DNA synthesis?

A

Defective ribosomal products (DRiPs)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Antigens are presented on MHC 2 through what pathway?

A

endocytic pathway

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What are the two ways antigens can be brought into the cell for the endocytic pathway?

A

endocytosis (B-cell) or phagocytosis (dendritic cell and macrophages)

17
Q

Where are the MHC 2 molecules synthesized?

A

endoplasmic reticulum

18
Q

Where in the cell does MHC 2 bind antigen?

A

It’s not in the RER lumen like MHC 1 - it’s in the endosomes

19
Q

What keeps the MHC 2 from binding antigen immediately?

A

When it’s synthesized, it’s synthesized with an invariant chain that hides the binding site

Over time in the acidic environment of the endosome, the invariant chain breaks down until only a piece remains - the CLIP

20
Q

What removes the CLIP so antigen can bind MHC 2?

A

HLA-DM

21
Q

What molecule inhibits (or just balances) the HLA-DM?

A

HLA-DO