Animal studies Flashcards

1
Q

why were animal studies so important in the past

A

Well thats where we got most of our information from on how the mind worked. either animal or lesion studies.

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2
Q

What limitations do both animal and fMRI research share?

A
  • The nature of the studies are not realistic
  • the way the studies are designed they need to include long delays – doesn’t exactly mirror the cognitive processes you are studying
  • can only be a correlational technique
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3
Q

why do we see less animal studies today?

A
  • The number of animal studies is way smaller now than the number in the past, 20/40 years ago. This is because techniques in humans have refined so much*
  • linked to one of the R’s - refinement. if you dont need ot use the animal dont. development of techniqes mean they can be applied to humans.*
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4
Q

Why use animals if we wanna study the minds of humans?

A
  • Animals = more simplified models of the human brain. Studying them is easier
  • Animals have shorter lifespan. We can study the onset, development and eradication of disease or other things across as the animal grows
  • Convenient – can get hold of them, do stuff
  • Allows for genetic manipulation –manipulate nervous system, genes, hormones etc… something we couldn’t do in people.
  • can control experiments with animals in a way you couldn’t with humans -Animals don’t know they’re in an experiment -No demand characteristics. No wondering “what are they doing this for”?
  • Have no symbolic system of representation – humans we have language, but animals don’t have equivalent language capabilities (both strength and weakness)
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5
Q

Why shouldn’t we use animals?

A
  • Yes similar to humans but not the same, physiological systems will be different
  • Human brains are different to animal brains
  • Animals require months of training to perform a task a human could learn in 5 minutes. Once they are trained they often spend months performing the tasks while recordings are made
  • Expensive
  • Ethical reasons - may distress animals.
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6
Q

why shouldn’t we use animals: different physiology to humans

A
  • genetic variations exist between humans and other animals; and also between different strains of the same species.
  • Pharmacological research might not work – drugs may have a heterogenous effect on humans vs animals. Not the same for both.
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7
Q

Why shouldn’t we use animals: overtrained

A
  • Animals require months of training to perform a task a human could learn in 5 minutes.
  • Once trained they often spend months performing the tasks while recordings are made.
  • Thus monkeys = overtrained and most likely perform tasks different to that of a naïve human subject.
  • hard to use this to explain human functioning.
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8
Q

Why shouldn’t we use animals: spenny

A
  • Expensive
  • Special environment needed to keep animals in
  • If you don’t think of the right q’s when experimenting with animals = waste of everyones time.
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9
Q

Why shouldn’t we use animals: distresses animals

A
  • Ethical reasons - may distress animals.
  • unless it has a direct benefit (e.g. the covid vaccine) - ppl argue it’s not right
  • distress - influences behaviour /physiology - Affects findings.

Lots of animal research – mice are very stressed/starved to the point that the “Reward” form the task = irresistible

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10
Q

When did animals in research start getting legal protection?

A

in 1959 when Russel and Burch came along - created the concept of the 3R’s in “The Principles of Humane Experimental Technique”

  • Replacement – methods which try avoid/replace using animals in research where possible
  • Reduction – methods that reduce the number of animals used per experiment
  • Refinment – methods which minimise suffering and improve animal welfare
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11
Q

What did the ideas put forward by Russel and Burch lead to..?

A

The Animals (scientific procedures) Act, 1986.

  • protects animals in any experimental or other scientific procedure which may cause pain, suffering, distress or lasting harm to the animal.
  • Protected animals under the Act are any living vertebrate other than man and any living cephalopod
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12
Q

What did the The Animals Act, 1986 changes mean for the animals

A
  • Protection
  • No animal can be used without 3 home office licences being in place
  1. Establishment licence
  2. Project licence
  3. Personal licence
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13
Q

How can we choose the species of the animal we use?

A
  • Scientific procedures Act limits the number of species we can work with.*
  • the highest primate we can use is the rhesus monkey. Cant use great apes or chimpanzees*
  • Can choose animals based on well validated studies in the past. to build on things we already know - often leads to using rats or mice.*
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14
Q

when would you use an animal even if there is. areaonable alternative to them available?

A

EEG, TMS and fMRI can all be applied to both humans and animals. Why then use animals?

  • allow for more precise manipulations to to the nervous system
  • Better targeting of the process you want
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15
Q

Why are animal studies better than human studies?

A

Better resolution in techniques in animals compared to the techniques available to humans

  • Yes, both EEG (temporal) and fMRI (spatial) good resolution
  • but animal - single cell electrophysiology - can look at the activity of specific neurons in the brain
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16
Q

What is single cell electrophyisology

A

look at the activity of specific neurons in the brain. Implant electrode into mouse/rats brain and record neurons firing.

  • clear spatial and temporal resolution
  • pretty clear precision (within microns)
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17
Q

Describe how O’keefe used extra-cellular single unit recordings

A
  • He placed electrodes into target site
  • While animal runs around its environment these cells fired when they were in certain regions
  • After the animals been killed – you can confirm the placement of those electrodes

This research led to hypothesis that – hippocampus contained the neural basis of a cognitive map.

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18
Q

How can we use single single unit recordings in human studies

A

Miller et al., 2012

  • n with epilepsy had eleectrodes implanted anyways
  • researchers just hopped on the back of this, didnt stimulate any area but just listened
  • then gave n a series of tasks - remember locations, events occurring in different locations and asked to recall these
  • Found certain place cells = active while n recalled such space-related information
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19
Q

How has animal research been used to guide human studies

A

Well when john o’Keefe found place cells in mice that seemed specific to space that was 1 thing. But then when Miller et al., 2012 used single unit recordings in humans were related to spatial information processing

really drove home the fact that these cells were involved in space. Showed that the

  • exploration level the items - stored with the context
  • retriving even single items reinstates the context and potentially cue othe r context related memories
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20
Q

What cells have been discovered using animal research?

A
  • Place cell
  • HD cell
  • Boundary cell
  • Grid cell
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21
Q

How much should we lesion?

A

They need to. bevery accurate - dont want lare area of brain damaged. HM - yes his hippocampus was damages but also his amygdala and parahippocampal regions. doesnt allow for such a clean study.

22
Q

How do we kow where. tolocate the lesion?

A

Stereotactic surgery

  • Animal is headfixed.
  • Coordinates taken from a brain atlases
23
Q

How, since the 1980’s, have been able to produce more selective lesions

A

Using certain types of immunotoxins - which target only certain receptors

  • produce an antibody which is immunotoxin
  • antibody attaches to a certain receptor, taken inside the cell, results in cell death
  • but ONLY kills cells with those receptors - not others
  • can then look to see if these cells were necessary for a cognitive process

Highly selective lesions - only certain receptors distroyed, other cells in the same brain area = intact.

24
Q

List the different types of lesion

A
  • Neurotoxic lesions – these just kill anything
  • Excitotoxic lesions – selective
  • Immunotoxic lesions – most selective

Ipitenic acid – a type of excitotoxic lesion

25
Q

What type of lesion is Ipitenic acid

A

A type of excitotoxic lesion. also a type of amino acid

  • Attaches to cell body and sends cell into metabolic frenzy and uses us many of its physiological reserves.
  • Cell body then dies
  • But all of the fibres of passage in that region remain intact as they dont contain cell bodies - they are myelin sheets and axons
  • so can leave the connections between regions intact and kill cell bodies in that area
26
Q

How is an excitotoxic lesion a step down lesion from an immunotoxic one?

A

Because the immunotoxin lesion is a bit like the excitotoxic lesion but more highly selective for certain types of cells in brain regions

27
Q

What are more precise ways of manipulating neural activity

A

Start using pharmacological manpipulations

  • drug delivery
  • Antagonists / agonists of certain receptors
  • Genetic manipulations*
  • Designer receptors exclusively activated by designer drugs (DREADDs) - very recent development - last 15 years or so n started using this
28
Q

GABA is inhibtiory - what happens when gaba interacts with the neuron

A

Makes the neruon less likely to fire action potentials or redlease neurotransmitters

29
Q

What happens when GABA binds to the GABA A receptor?

A
  • causes the opening of an associated ion channel that is permeable to the negatively charged ion chloride
  • when -CL ions flow into the neuron they hyperpolarise the membrane potential of the neuron
  • decreases the likleihood it fires an AP
30
Q

What are the two types of receptors GABA interacts with?

A
  • GABA A - ionotrpoic receptors
  • GABA B - metabotropic receptors (or G protein coupled receptors)
31
Q

What happens when GABA binds to the GABA A receptor?

A
  • when activated they frequently cause the opening of potassium channels
  • channels allow positively charged potassium ions to flow out of the neurosn
  • again make neuron hyperpolarised and less likely to fire an action potential
32
Q

What terminates the actions of GABA?

A
  • Proteins called GABA transporters (GAT) transport GABA from the synaptic cleft into neurons or glial cells
  • Alternatively they are degraded by mitochondrial enzymes
33
Q

Because GABA reduces neural transmission what effects would increased GABA have?

A

Sedatory effects

  • drugs like alcohol and benzos that have sedatory effects actually increase activity at the GABA receptor
34
Q

how does pharmacological manipulations affect nerual activity?

A

hundreds of compounds can be used that selectively bind to membrane bound receptors

  • certain receptors on the cell bodies
  • are affected by certain drugs you can out into the animal
  • can either shut cells down or make them hyperexcitable
34
Q

how does pharmacological manipulations affect nerual activity?

A

hundreds of compounds can be used that selectively bind to membrane bound receptors

  • certain receptors on the cell bodies
  • are affected by certain drugs you can out into the animal
  • can either shut cells down or make them hyperexcitable
35
Q

Whats the difference between immunotoxin techniques and using pharmacological mannipulations?

A
  • rather than injecting a toxin and killing a brain region
  • put a cannula into the skull and put a cannula tube over that
  • then infuse the pharmacological agent into a specific region
  • has a temporary effect on the receptors
36
Q

Give an example of a pharmacological agent hat would increase and decrease neural excitability?

A
  • GABA-receptor antagonists e.g., metrazol (increases neural excitabiltiy)
  • GABA-receptor agonists e.g., muscimol (decreases neural excitability)
37
Q

Pharmacological manipulations: What are two general ways to get pharmacological agents to have an effect on certain receptors?

A
  • administer it locally through a cannula
  • inject it systematically

Depends on the question your asking and the drug your using

38
Q

DREADDs

A

lock and key approach

  • Take chemically engineered receptors, activated only by a drug called Clozapine-N-oxide, CNO
  • n order to chemically engineer the receptors and actually get them into the animal’s brain, they are carried in by a virus
  • genetically engineer a virus to carry in the code for these receptors - do the stereotactic surgery as you would with any lesion or pharmacological manipulation
  • to put the virus into the brain region your interested in (Viral transduction)
  • as animal is recovering - leave the receptor to express on the surface of neurons you put them
  • then at a later time you can give the CNO orally/injection/directly through cannula
  • temporaralyl shuts down cells that expressed those receptors
  • cool bc we can vbe more precise
39
Q

are all DREADDS inhibitory?

A

no you can use DREADS to both excite or inhibit specific populations of neurons

to see how this affects behaviour

40
Q

Dumb down DREADDS ples

A
  • Not just shutting down the brains natural receptors.
  • Your introducing new receptors to the brain, putting them only where you want them
  • Then when you put the CNO in it shuts down those receptors and the nerual activity in that regoin
  • Effectively a termporary lesion but only where you put those receptors
41
Q

Optogenetics - lock and key approach

A
  • these are light activated receptors - virally introduced into neurons through viral transduction (surgery)
  • if the ting is near the surface of the brain (like in mice) you can place a fibreoptic cable on head and the light will go through the skull and shut down the cells
  • but often they acc put cable through brain into tiny region e.g. hippocampus and using a light switch neurons on and off
42
Q

What is viral transduction?

A

Introducing new receptors into the brain via a virus.

43
Q

whats the big difference between DREADDS and optoginetics

A

Optoginetics is very similar to DREADDS but instead of maniupating neurons with drugs, (injecting CNO and having this the means of shutting down cells) action potentials are triggered by pulses of light

44
Q

Six steps to optoginetics?

A
  1. Piece together genetic construct: premotor to drive expressio, gene-encoding opsin (light sensitive ion channel)
  2. Insert construct into virus
  3. Inject mouse with virus into their brain; opsin is expressed in targeted neurons
  4. Insert optrode fibre optic cable plus electrode onto mouse head
  5. Laser light of specific wavelength opens ion channel in neurons.
45
Q

give an example of a study using optoginetcs?

A
  • optoginetic stimulation of the hippocampal engram activates fear memory recall
  • implanted a false memory
  • identified the cells involved for a pavlovian signal - like a noise, shock,
  • labelled cells responsible for animal learned that association
  • then using optoginetics shut those cells down/created them again
  • when they activated the engram animal behaved like it was about to reieve a shock
46
Q

What is the receptor we inject with optogenetics called?

A

microbial ospin

47
Q

2 photon calcium imaging

A
  • Calcium is an essential intracellular messenger in neurons Levels can be 100x higher when the cell is firing
  • so if you can in real time image and watch the production of calcium through a brain region you get a clear real time insight into the activity of the brain
48
Q

2 photon calcium imaging

A
  • headfix animals
  • its on a little ball so can move around but not going anywhere (like a treadmil)
  • put the two photon microscope close to the window you produced during surgery
  • allows it to see through neural tissue to the region you wanna look at
  • used in virtual navigation study
49
Q

Example study using 2 photon calcium imaging?

A

Dombeck et al.,

  • studied patterns of place cells as animal navigated in VR
  • Investigated genetically encoded calcium indicator - g count 3
  • while its running - recording what the cell bodies are producing in terms of calcium
  • Allowed them to image place cells allog the track n is running down. Firing in sequential order with the environment.
50
Q

Whats the difference between EEG and 2 photon calcium imaging

A

in EEG you are listening to the cell and in 2 photon calcium imaging you are watching it. effectively glows under the microscope