Amino acids, nucleic acids, water & ATP Flashcards

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1
Q

What are amino acids?

A

Amino acids are the monomers from which proteins are made.

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2
Q

What bond forms between two amino acids in a dipeptide?

A

A peptide bond forms between two amino acids.

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3
Q

How are dipeptides formed?

A

Dipeptides are formed by a condensation reaction between two amino acids.

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4
Q

What are polypeptides?

A

Polypeptides are chains formed by many amino acids joined together.

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5
Q

What determines the primary structure of a protein?

A

The specific sequence and number of amino acids in the chain.

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6
Q

What happens during the secondary structure of a protein?

A

The primary structure folds into a 3D shape using hydrogen bonds, forming an alpha-helix or beta-pleated sheet.

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7
Q

What bonds are involved in the tertiary structure of proteins?

A

Disulfide bonds (strong), ionic bonds (weaker), and hydrogen bonds (easy to break).

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8
Q

What is quaternary protein structure?

A

Two or more tertiary structures that come together, sometimes with prosthetic groups.

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9
Q

What are examples of globular proteins?

A

Insulin and hemoglobin (soluble).

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10
Q

What are examples of fibrous proteins?

A

Collagen and keratin (insoluble).

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11
Q

What is an enzyme and what is its role?

A

Enzymes are globular proteins that act as biological catalysts, increasing the rate of chemical reactions.

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12
Q

How do enzymes lower activation energy?

A

Enzymes allow the formation of enzyme-substrate complexes, lowering activation energy without being changed permanently.

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13
Q

How do substrates bind to enzymes?

A

Substrates bind to the enzyme’s active site to form enzyme-substrate complexes.

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14
Q

What is the lock and key hypothesis?

A

The enzyme’s active site has a specific shape that is complementary to the substrate.

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15
Q

What is the induced fit model?

A

The enzyme changes its active site shape to better fit the substrate and improve the fit.

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16
Q

How does temperature affect enzyme activity?

A

Temperature increases enzyme activity until it denatures at high temperatures, breaking bonds.

17
Q

What happens to enzyme activity at extreme pH?

A

Enzymes denature because bonds are broken permanently.

18
Q

What happens when substrate concentration increases?

A

Enzyme activity increases until all active sites are full, after which it plateaus.

19
Q

How does enzyme concentration affect reaction rate?

A

Enzyme activity increases with more enzymes but eventually becomes limited by substrate concentration.

20
Q

What is competitive enzyme inhibition?

A

Inhibitors bind to the enzyme’s active site, competing with the substrate due to a similar shape.

21
Q

What is noncompetitive enzyme inhibition?

A

Inhibitors bind to the enzyme at an allosteric site, altering the enzyme’s shape and making the substrate no longer complementary.

22
Q

What is the structure of a nucleotide?

A

A nucleotide consists of a phosphate group, a pentose sugar, and an organic base.

23
Q

What are the complementary base pairs in DNA?

A

Adenine pairs with thymine, and cytosine pairs with guanine via hydrogen bonds.

24
Q

What is the difference between DNA and RNA?

A

DNA has deoxyribose, thymine, and is double-stranded. RNA has ribose, uracil, and is single-stranded.

25
Q

What is the function of DNA?

A

DNA stores genetic information, protects it with base pairing, and allows for accurate replication.

26
Q

What is semi-conservative DNA replication?

A

DNA replicates by splitting into two strands, using each strand as a template to form new identical strands.

27
Q

How does DNA helicase help in replication?

A

DNA helicase breaks hydrogen bonds between bases, separating the strands.

28
Q

What is the role of DNA polymerase in replication?

A

DNA polymerase joins nucleotides together through condensation reactions, forming phosphodiester bonds.

29
Q

What makes water a polar molecule?

A

Covalent bonds between O and H cause a polar molecule, allowing it to dissolve other polar molecules.

30
Q

What bonds form between water molecules?

A

Hydrogen bonds form between water molecules.

31
Q

What are the unique properties of water?

A

Water is metabolite, adhesive, cohesive, a universal solvent, has a high specific heat capacity, and surface tension.

32
Q

What are the uses of ATP?

A

ATP is used for metabolic processes, movement, active transport, secretion, and molecule activation.

33
Q

What is the structure of ATP?

A

ATP consists of adenine, ribose, and three phosphate groups.

34
Q

How is ATP synthesized?

A

ATP is synthesized by the addition of inorganic phosphate to ADP using energy from respiration.

35
Q

Why is ATP a good energy source?

A

ATP releases energy in small, manageable amounts and has unstable phosphate bonds with low activation energy.