Amino Acids Lecture Flashcards

1
Q

Another name for R-groups

A

Side chains

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2
Q

Another way of writing primary/secondary/tertiary?

A

1y/2y/3y

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3
Q

How many natural amino acids are there?

A

20

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4
Q

Define primary structure

A

Linear sequence of amino acids joined by peptide bonds

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5
Q

What are nucleic acids built from?

A

Nucleotides

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6
Q

Give two important functions of nucleic acids

A

Determine structure of DNA

Basis of energy transfer molecules e.g. ATP

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7
Q

Name three components of a nucleotide

A

A pentose (5C) sugar
A nitrogenous base
A phosphate group

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8
Q

What are the two types of nitrogenous base found in nucleotides?

A

Purines or pyrimidines

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9
Q

What pentose sugar is found in RNA?

A

Beta-ribose

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10
Q

What pentose sugar is found in DNA

A

Beta-2-deoxy-ribose

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11
Q

What are the two types of purines found in nucleic acids?

A

Adenine and guanine

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12
Q

What pyrimidines are found in nucleotides?

A

Cytosine, thymine, uracil

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13
Q

What are proteins?

A

Biomolecules that contain many amine bonds, formed by joining amino acids together

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14
Q

How are D amino acids recognised?

A

NH3+ group in right side of Fischer projections

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15
Q

How are L amino acids recognised?

A

NH3+ group on left side of Fischer projections

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16
Q

In what form are most naturally occurring amino acids?

A

L form

17
Q

What bonds form between two cysteine residues?

A

Disulphides bridges, giving tertiary structure more strength

18
Q

Name the three groups of amino acid based on their R-group

A

Hydrophobic, hydrophobic aromatic, hydrophilic

19
Q

What bonding is present in primary structure of proteins?

A

Peptide bonds

20
Q

What is the secondary structure?

A

Regular folding of regions of polypeptide chain

21
Q

What bonding is present in the secondary structure

A

Hydrogen bonds

22
Q

Name the two possible arrangements of the secondary structure

A

Alpha helix and beta sheet

23
Q

Describe the arrangement of the alpha helix

A

All R-groups point outwards

24
Q

What is a nucleoside?

A

A dimer formed when a pentose sugar is linked to a nitrogenous base

25
Q

Where does the link form when a purines base links to a pentose to form a nucleoside

A

C1 of pentose and N9 of purine base

26
Q

Where does the link form in a pyrimidine nucleoside?

A

C1 of pentose and N1 of pyrimidine

27
Q

How is the tertiary structure held together

A

Van der waals, hydrogen bonds, ionic bonds, disulphide bridges

28
Q

How is quaternary structure formed?

A

Interactions of different polypeptide chains

29
Q

Give an example of a structural protein

A

Collagen, found in connective tissue, related disease is scurvy

30
Q

Give an example of a hormone

A

Insulin, regulates blood glucose levels, related disease is diabetes

31
Q

Give an example of a protein involved with immunity

A

Immunoglobins (antibodies)

32
Q

Give an example of a transport protein

A

Haemoglobin, transports oxygen around body

33
Q

Give an example of an enzyme

A

Hexokinase, carries out first step of glycolysis

34
Q

Give an example of a contractile protein?

A

Actin and myosin

35
Q

Give an example of a storage protein

A

Ferritin, stores iron in the liver

36
Q

What is transcription?

A

Synthesis of RNA from DNA

37
Q

What is translation?

A

Synthesis of proteins from RNA

38
Q

Structural name of adenine

A

6-aminopurine

39
Q

Structural name of guanine

A

2-amino-6-hydroxypurine