ahhhhhh 2 Flashcards
regulating mucus water content: excess water (5 steps)
- Na+ actively pumped across the basal membrane out of the cell into tissue fluid making a concentration difference between mucus and cell.
- Na+ diffuses through sodium channel (ENaC) in apical membrane into cell down concentration gradient.
- electrical gradient between tissue fluid and mucus. Cl- diffuses down electrical gradient from mucus between cells to tissue fluid
- water is drawn out of cell in tissue fluid by osmosis due to high salt conc. in tissue fluid
- water is drawn out of mucus by osmosis into cell down concentration gradient.
regulating mucus water content: too little water (5 steps)
- Cl- from tissue fluid is pumped into cell across basal membrane
- Cl- diffuses through the open CFTR channel into mucus down concentration gradient.
- Na+ diffuses down electrical gradient from tissue fluid into mucus via gap between cells
- elevated salt concentration in mucus draws water out of the cell by osmosis
- water is drawn into cell by osmosis
regulating mucus water content: CF lungs
- CFTR channel is absent or not functioning
- Na+ channel is permanently open allowing Na+ to diffuse into cell
- Na+ is pumped out of the cell into tissue fluid
- Cl- down electrical gradient into tissue fluid
- water is continually removed from mucus by osmosis
what is the result of water being continually removed from the mucus in CF lungs
mucus is too sticky and cant be moved by cilia
- mucus to build up effecting ventilation of aveoli
- mucus becomes infected with bacteria
- phagocytic cells that kill pathogens are produced
- phagocytes break down releasing DNA which makes the mucus even more sticky
- causing airway inflammation and lung damage
what is the evidence for the fluid mosaic model
- experiments showed types of proteins could dissociated from the membrane and others that could not. this supports fluidity and the fact there are some peripheral proteins and some integrated proteins
- freeze-fracture electron microscopy fractured between the lipid layer to show that the inner surface was a smooth mosaic interspersed with large proteins.
- plant proteins lectins bind to polysaccharides labled and when mixed with membrane lectins only bond to the outer surface membrane showing polysacharides where on outside.
- fusing mouse and human cells after 40 mins protein completely intermixed showing components are fluid
the experiment to prove DNA replication is semi conservative
- DNA either replicates fragmentary, semi conservatively or conservatively.
- melso and stah grow escherichia coli DNA bacterium in medium contain heavy isotope N15 alll nucleotides contain heavy nitrogen making DNA more dense.
bacteria then moved to medium containing normal N14 all new nucleotides light.
bacteria allowed to divide once. DNA then extracted and centrifuged producing a bond of medium density DNA so DNA did not replicate conservatively
if allowed to undergo a second division producing a strand of medium DNA and one light band of DNA proving DNA did not replicate fragmentary
stages in atherosclerosis
- endothelium becomes damaged and dysfunctional
edothelium becomes damaged and dysfunctional. resulting in high blood pressure. putting extra strain on cells. - inflamatory response
white blood cells move into artery wall. they accumalate chemicals such as cholesterol. a fatty deposit builds up called an atheroma - plaque is formed
calcium salts and fibrous tissue build up at the site resulting in hard swelling called plaque. artery wall loses elasticity and hardens. - lumen becomes narrower
making it more difficult to pump blood
and leads to a rise in blood pressure - feedback
plaque –> rise in blood pressure —> damage to edothelium —> plaque
what are the stages in the blood clotting cascade
- plaque reptures exposing collagen to the blood
- platelets and damage tissue release a protein called thromboplastin
- thromboplastin activates enzyme that catalyses convertion of protein prothrombin into enzyme called thrombin. protein, vitamin k and calcium must be present
- thrombin then catalyses conversion of soluble plasma protein, fibrinogen insoluble fibrin.
- a mesh of fibrin forms that traps more platelets and red blood cells to form a clot.
name the steps in fertilisation
1.the acrosome reaction
when the front of the sperm touches the zona pellucida of the egg the acrosome bursts and releases enzymes which digest a channel in the zona pellucida
2. membrane fusion
the surface membranes of the sperm and egg fuse together allowing the haploid nucleus from the sperm to enter the cytoplasm of the egg
3. cortical reaction
vesicles inside the egg called cortical granules fuse with the cell membrane and release their contents. these cause changes in the surface layer of the egg preventing other sperm from entering
4. meiosis is restarted
the egg is really a secondary ocyte and the presence of the sperm cell causes the 2nd division and meiosis to now occur
5. fertilisation
the chromosomes from the haploid egg and sperm combine to restore the diploid number
what is the lac operon model
prokaryote escherichia coli.
only produce the enzyme beta- galactosidase to break down carbohydrate lactose when present in surroundings converts disaccharide lactose to monosaccharides glucose and galactose
when lactose is not present a lactose repressor molecule bonds to the DNA to prevent transcription of beta-glaactosidase gene.
RNA polymerase cannot bind to the DNA promoter region.
when lactose is present it binds to the repressor preventing it from binding to the DNA and the gene is transcribed
evolution by natural selection
- introduction of selection pressure caused by change in environment, competition or predators.
- random mutations produce new alleles which is advantageous. this is caused by natural genetic variation
- individuals with the advantageous allele survive and reproduce.
- advantageous allele is passed on.
- there is a increased frequency of the advantageous allele in the population / gene pool.
taxonomic hierarchy
series of taxa which members all share one or more common feature
- kingdom
- phylum
- class
- order
- family
- genus
- species
types of kingdoms
- animali
muticellular eukoryates that are heterotrophs - plantae
muticellular eukoryates that are autotrophs - fungi
muticellular eukoryates that are heterotrophs or absorb nutrients from decaying matter - protoctista
eukaryotes that photosynthesis or feed on organic matter
but not included in other kingdoms - prokyaryotae
prokaryotic organisms - chromista
includes some groups of fungi plantae and protoctista. which all have tinsel like flagella. the shared features between them make them more closely related to each other than any other kingdom
what are plant cell walls made of
cellulose. which is a polymer of alpha and beta glucose.
each chain contains 1000 - 10000 units. straight chain. H bonds form between OH groups of neighbouring chains forming bundles called microfibrils which are about 60 -70 cellulose molecules wound in helical arrangement stuck together with polysacharide glue
hemicellulose and pectins
what are the steps in mass transport
- photosynthetic products are actively loaded into phloem increasing solute concentration. which draws water into sieve tubes by osmosis from adjacent xylem vessels
- this increases hydrostatic pressure at loading end
- at sink, solutes are unloaded lowering hydrostatic pressure. the difference in pressure between loading and unloading site causes mass flow along the sieve tube from high to low pressure
medications for treating CHD (5)
- ACE inhibitors
reduce synthesis of angiotensin II which is a hormone that causes vasoconstriction so lowers blood pressure. - calcium channel blockers
block calcium channels in muscles lining arteries. stopping them from contracting. lowering blood pressure. fatal with someone with heart failure
-diuretics
increase volume of urine riding the body of excess fluids and salts decreasing blood plasma volume lowering blood pressure - antihypersentive beta blockers
prevents stimulation of adrenergic receptors responsible for increase cardiac action. control hear rhythm and treat angina as well as reducing high blood pressure. - amticoagulant and platelet inhibiting drugs
asprin and clopidogrel reduces stickness of platlets.
walfrin interfers with vitamin K affects synthesis of clotting factors.
carbohydrates
monomers
-glucose, galactose, fructose
disaccharides
- sucrose: glucose + fructose
- maltose: glucose + glucose
- lactose: glucose + galactose
polysaccharides
- starch: amylose (straight) and amylopectin (branched)
- glycogen: animals. numerous side branches
- cellulose. alpha and beta glucose. microfilis is bundles of cellulose joined by H bonds and microfibrils are held together by hemicellulose and pectin
properties of water
solvent:
dissolve other polar and ions
allowing biochemicals reactions to occur in cytoplasm. dissolve substances transported in blood/lymph or xylem/phloem. to enable transport lipids must combine with proteins forming lipoproteins
thermal properties
- high specific heat capacity
strong H bonds. water warms and cools slowly. useful for organisms avoid rapid changes in internal temperature. aquatic life
cohesion: hydrogen bonds between water molecules.
adhesion: Hydrogen bonds between water and cell wall
capillary action
density and freezing points
water expands when frozen as when molecules slow down the max number of hydrogen bonds can form holding them further apart. ice less dense than water.
stages in the sliding filament theory (7)
- Ca2+ attaches to the troponin molecules causing them to move
- as a result tropomyosin shifts exposing myosin binding sites
- myosin heads bind with these sites forming cross bridges
- when myosin head binds to actin. ADP and Pi on head are released
- myosin changes shape, causing myosin head to nod forward. resulting in relative movement of filament attached actin moves over the myosin
ATP binds to myosin head causing it to detach from the actin - ATPase on myosin head hydrolyses ATP forming ADP + Pi.
- this hydrolysis changes shape of myosin head returns to upright position.
how does the nerve impulse trigger the contraction of muscle
when a nerve impulse arrives at a neuromuscular junction calcium ions Ca2+ are released from the sarcoplasmic recticulum.
the Ca2+ diffuses through the sarcoplasm
this initiates the movement to the protein filament leading to muscle contraction
when there is no more nerve impulse the muscles relaxes
Ca2+ are actively pumped out of the muscle sarcoplasm, using ATP.
troponin and tropomyosin move back blocking the myosin binding site on the actin.
how does ATP release energy
ATP(aq) —-> ADP(aq) + hydrated Pi + energy
ATP in water is at a higher energy level than ADP and PI
ATP in water has chemical potential energy
a small amount of energy is required to break the bond holding phosphate to ATP. once removed Pi becomes hydrated.
a lot of energy is released as bond form between water and phosphate
it requires energy to separate Pi from water to make ATP
glycolysis (4 steps)
first step in respiration
1. 2 Pi are added to the glucose from 2ATP molecules increasing glucose reactivity
2. glucose splits into 2 phosphorylated 3 carbon compounds
3. each intermediate is oxidised producing 3 carbon pyruvate. 2 H are removed and are taken up by co enzyme NAD producing reduced coenzyme NADH
4. Pi from intermediate compound transfers to ADP creating ATP along with the energy produced when glucose goes to pyruvate as it is at a higher energy level.
overall reactions :
glucose ———–> 2 intermediate phosphorlated 3 carbons
2 ATP ———–> 2 ADP
2 intermediate ————-> 2 pyruvate + 4 Hydrogens
4ADP + 2 Pi (from pyruvate) —–> 4ATP
4H + 2NAD —–> 2 NADH
net yield:
- 2 ATPs
- 2 pairs of H = 4 Hydrogens
- 2 3 carbon pyruvate
2H + coenzyme NAD —> reduced coenzyme NAD
- 2 NADH / reduced coeNAD
what happens to pyruvate in the link reaction
pyruvate is
- de carbozylated (Co2 released as a waste product)
- de hydrogenated (2 Hydrogens are removed and taken up by coenzyme NAD
resulting in 2 carbon molecule which combines with coenzyme A to form acetyl co enzyme A (acetyl CoA)
pyruvate + NAD + CoA –> Acetyl CoA + reduced NADH + CO2
what are the 4 important types of reaction that occurs in the krebs cycle
- phosphorylation reactions. which add a phosphate e.g ADP + pi —> ATP
- decarboxylation reactions, which break off CO2
- dehydrogenation. (redox reaction) molecule which gains H is reduced
molecule that loses H is oxidised
what happens in the Krebs cycle
- each 2c acetyl CoA combine with 4 carbon compound creating 6 carbon compound
- in a circular pathway the original 4 carbon compound are recreated
- 2 steps involve decarboxylation
- 4 steps involve dehydrogenation
- 1 step involves substrate level phosphorylation with direct synthesis of ATP
hydrogen produce turn FAD / NAD into reduced NAD / FAD
net yield:
2 acetyl CoA go in
produces - 2 ATP
- 6 reduced NAD / NADH
- 2 reduced FAD
- 2 CO2
- reformation of the 4 carbon intermediate
stages in the electron transport chain (6)
- reduced Co enzyme carries 2H+ and 2e- to electron transport chain on inner mitochondrial membrane
- e- pass from 1 electron carrier to the next in a series of redox reactions
- H+ move inter membrane space creating high H+ conc.
- H+ diffuses back into mitochondrial matrix down electron chemical gradient
- H+ diffusion allows ATP synthases to catalyse ATP synthesis.
- e- and H+ recombine to form H which combines with O2 to create water.