After Midterm Flashcards
what is the definition of lipids?
a group of hydrophobic/lipophilic or amphipathic molecules, including fatty acids, waxes, sterols, fat-soluble vitamins and others.
when are lipids soluble?
in organic solvents
what are the building blocks of biological membranes?
lipids
what are saturated fatty acids?
only single bonds
what are unsaturated fatty acids?
have double bonds
what are the 2 zones of a fatty acid molecule?
one hydrophobic (saturated chain) and one hydrophilic (fully oxidized carboxylic acid)
what does an amphipathic molecule have?
a weaker hydrophilic zone, so it can form organized structures that form an interface between water and lipids
what happens when a fatty acid has a very strong hydrophilic zone?
the molecule can have detergent like characteristics, which will disturb and destruct lipid structures into smaller droplets to form emulsions
in what quantities are free fatty acids safe around cells?
small quantities
when are free fatty acids released from lipids?
during digestion to aid in emulsifying dietary fat, and then reconstructed in the intestinal cells to form lipoprotein particles, which can circulate safely.
what does the name palmitic acid imply?
that the carboxylic acid group is protonated, which will only be true at very low pH
what will Free fatty acids at physiological pH have?
deprotonated carboxylate groups
what types of fatty acids can mammals not produce?
n-3 and n-6 fatty acids
what has a lower melting point; short or long chain fatty acids?
short chained
what has a lower melting point; saturated or unsaturated fatty acids?
unsaturated
do unsaturated fatty acids in nature have a cis or trans formation?
cis
describe arachidonic acid
a longer chain of 20 carbons and 4 cis double bonds that generate a circle-like structure. This will generate high membrane fluidity, and also makes it a substrate to form eicosanoids
double bonds in fatty acids are always separated by how many carbons?
3
what 2 fatty acids are considered to meet our essential fatty acid requirements?
linoleic acid (n-6) and alpha-linolenic acid (n-3)
what happens to a fatty acid the more polyunsaturated it becomes?
more convoluted in shape
what is alpha linolenic acid?
a precursor used to form EPA (eicosapentaenoic acid) and DHA (docosahexaenoic acid).
what happens in desaturation
2 hydrogens are removed in the addition of a cis-double bond (3 carbons over from the existing db, moving towards the carboxylate end)
what happens in elongation?
2 additional carbons are incorporated from acetyl CoA, onto the existing carboxylate terminus.
what do the free AA and EPA pools act as?
as substrate for various eicosanoid-forming enzymes
what is a very strong cyclooxygenase inhibitor?
acetylsalicylic acid (ASA)
what is an Eicosanoid?
20 carbon metabolites of AA and EPA.
describe triglycerides
three fatty acids esterified to the glycerol backbone
is glycerol polar or non polar?
polar
are triglycerides polar or non polar?
non polar
very low water solubility
how do we ingest and store most lipids?
as triglycerides
describe phospholipids
similar to TG in that they contain glycerol and 2 fatty acids, but the third fatty acid at sn-3 has been replaced by a phosphate group and a nitrogen containing base
what do digestive lipase do in the small intestine?
will clip the sn-1 fatty acid, forming a 2-lyso-phspholipid (2-lysoPL), which is a strong detergent that aids in fat digestion, but must be converted back to a PL once inside cells.
what are the main functions of phospholipids?
- Predominant components of membrane bilayer;
- Source of substrate for eicosanoids;
- Anchors membrane proteins;
- Intracellular signaling.
how are sterols and steroids characterized?
by a four-ring core structure called the steroid nucleus. with one alcohol group
what are the main sources of body cholesterol?
- Diet (~40%) from animal sources (meat & eggs);
* Endogenous (~60%) produced in liver.
what are the main function of sterols?
- Components of membranes;
- Bile acids & salts;
- Steroid sex hormones;
- Vitamin D.
what is the form of free cholesterol?
amphipathic
where is the hydroxide group located in a cholesterol?
at the end, it’s polar and will interact with aqueous environments, while the steroid nucleus will interact with fatty acid tails of PLs in the middle of the membrane.
what starts to degrade dietary TG into free fatty acids (FFA) and DG?
lingual lipase in the saliva
what does the stomach use to help breakdown fats?
gastric lipase
where does excess bile go?
into the gallbladder
what is the main function of bile?
to act as a detergent, in order to facilitate the formation of mixed micelles in the intestine.
what happens when fats enter the small intestine?
are emulsified by continued mechanical shearing (muscle contractions) and the detergent effects of the bile components
what does pancreatic lipase do?
hydrolyze triglycerides (sn-1 and sn-3 positions), to release two FFA and one 2-MG
what does cholesterol esterase do?
hydrolyzes the cholesterol-esters to release free cholesterol and FFA
what does phospholipase do?
hydrolyze phospholipids into 2-lysophospholipids (2-lysoPL) and FFA.
what does emulsification of fat achieve?
increase their surface area so lipases can attack their outer edges more effectively
what can protein transporters increase?
the rate of absorption of lipophilic molecules through membranes.
what are chylomicrons?
lipid-rich particles that have a hydrated surface, allowing the formation of an organized fat emulsion.
what is the largest lipoprotein in the body?
chylomicrons
what releases chylomicrons?
the intestinal cell releases them via exocytosis into the lacteal, of the lymphatic system.
what is the lacteal?
where extracellular fluid and chylomicrons collect to form lymph, which slowly oozes away into larger and larger lymphatic vessels.
where do chylomicrons eventually end up?
in the hepatocyte
when do chylomicrons peak?
30 mins- 3 hours after a meal
what is the role of lipoprotein lipase?
binds to ApoC on passing chylomicrons (and VLDLs), and it then reaches into the core and hydrolyzes TG, releasing FFA
what are lipoproteins?
act as transporters for fat in the body
what is the role fo VLDL?
deliver TG from the liver to extrahepatic tissues, and to become the LDL particle.
what is the role of a LDL?
deliver cholesterol from the liver (initially as VLDL) to extrahepatic tissues.
which lipoprotein is the smallest?
HDL
what is the role of HDL?
extract cholesterol from vessel walls
what do lipase do?
hydrolyze fatty acids off the glycerol backbone
how much ATP does each beta oxidation produce?
5
what creates trans fats?
Partial hydrogenation of vegetable oils
what does a high intake of trans fats lead to?
- Increases LDL – cholesterol
- Decreases HDL - cholesterol
- Linked to CVD risk
what macronutrient has the most essential components?
protein
what is the recommended protein intake?
10-30% of total energy
what is protein used for?
an energy source as well as a substrate for glucose synthesis (through gluconeogenesis), and it also provides amino acids for protein synthesis and other areas of metabolism.
where do we find the most protein in our bodies?
connective tissues
what typically has more protein; plants of animals?
animals
what is selenocysteine?
a 21st amino acid, cded for in DNA by a unique mechanism
what is pyrollysine?
22nd amino acid, not present in eukaryotes
how many essential amino acids are there?
9-10
what are amino acids?
the monomer of protein, which are assembled into polymers that include short peptides, polypeptides, and proteins.
what is an essential amino acid?
can’t be made by body or can’t be made quickly enough to meet body needs for optimal health
what are the essential amino acids?
lys, thr, iso, leu, met, phe, trp, val and his plus arg in infants
can we make amino acids from scratch?
no, We need to make a “carbon skeleton” (alpha-keto acid) and then swap an amino group on that structure from another amino acid.
what is the nutritional relevance of lysine?
Is the first limiting amino acid in grains (present in the lowest quantities)
what is the nutritional relevance of Arginine?
Synthesized through the urea cycle
what is the nutritional relevance of Histidine?
Used in histamine synthesis
what is the nutritional relevance of aspartate?
Delivers nitrogen to the urea cycle and is transaminated to oxaloacetate
what is the nutritional relevance of glutamate?
Used in synthesis of GABA
what is the nutritional relevance of glutamine?
Important in protein metabolism because it carries nitrogen between organs
what is the nutritional relevance of glycine?
Used in the synthesis of porphyrin (found in heme)
what is the nutritional relevance of alanine?
Important in protein metabolism because it carries nitrogen between organs
what is the nutritional relevance of Leucine, Isoleucine and Valine?
Also known as branched-chain amino acids (BCAAs), encourage protein synthesis
what is the nutritional relevance of tyrosine?
Used in synthesis of dopamine, epi- and norepinephrine
what is the nutritional relevance of cysteine?
Used in synthesis of glutathione
what is the nutritional relevance of methionine?
Is the first limiting amino acid in legumes (present in the lowest quantities). If intake is low, can be made from cysteine.
what is the nutritional relevance of phenylalanine?
Genetic disease phenylketonuria involves defect in metabolizing phenylalanine. If intake is low, can be made from tyrosine.
what is the nutritional relevance of tryptophan?
Used in synthesis of serotonin and niacin (vitamin B3)
how do amino acids join?
through condensation reactions
what does a peptide refer to?
a linear structure
what does a protein refer to?
a folded structure
what are the 4 levels of protein structure?
1• = Amino acid sequence; 2• = Hydrogen bonding between backbone (i.e., not side chain); 3• = Side chain interactions; 4• = Assembly between more than one polypeptide
describe phosphorylation
Addition of Pi (inorganic phosphate) to a protein.
describe hydroxylation
Addition of OH (hydroxyl group) which provides site for cross linking in collagen and elastin
what does phosphorylation requires
micronutrient phosphorus
what does hydroxylation require?
micronutrients vitamin C and copper
describe gamma carboxylation
Addition of COOH (carboxylic acid) to an amino acid at the gamma carbon, which provides site for calcium binding.
what does gamma carboxylation require?
micronutrient vitamin K.
describe iodination
Addition of iodine to synthesize thyroid hormones that regulate metabolic rate.
describe ADP Ribosylation
Addition of ADP-ribose to proteins associated with DNA repair and protein function
what does ADP Ribosylation regulate too?
micronutrient niacin (vitamin B3).
what is the goal of protein digestion?
take dietary protein and break it down into small molecules, which include small peptides and free amino acids, that can be taken up by intestinal cells in the process of absorption.
is there any digestion of protein in the mouth?
no
what is the function of HCl in the stomach in protein digestion?
denature the proteins or to disrupt their complex structure and thereby inactivate them.
what is the activation of pepsinogen to pepsin triggered by?
HCl
what does pepsin do in protein digestion?
acts as an endopeptidase, meaning it breaks peptide bonds within (so not at the ends) of the polypeptide chain
what is the end product of gastric protein digestion?
mostly oligopeptides, but some large polypeptides and free amino acids as well.
what are the digestive proenzymes or zymogens secreted by the pancreas?
trypsinogen, chymotrypsinogen, proelastase, and procarboxypeptidase
what do proteolytic enzymes do?
act to hydrolyze amino acids from different parts of the polypeptide.
what do endopeptidases act on?
on the interior of the molecule, while exopeptidases act at the ends
how can amino acids enter the enterocytes through intestinal cells?
(a) facilitated diffusion, and (b) active transport.
what does facilitated diffusion depend of?
a concentration gradient
What does the PEPT1 transporter handle?
a significant portion of amino acid absorption and explains why a mixture of pre-digested free amino acids is actually absorbed slower than intact protein.
what is absorbed faster and why; essential or non essential amino acids?
essential because the expression of transporters and competition between amino acids for absorption exists.
what happens after protein absorption into the enterocyte?
the products of protein digestion enter the circulation and travel through the portal vein to the liver
what can amino acids in the liver do?
be used to support liver structure and function, can be degraded, or can be distributed in circulation to the rest of the body.
what is first pass metabolism?
The ability of the liver to clear substances from the portal circulation before they are released to the systemic circulation
what are the 4 factors to consider when talking about protein quality?
amino acid balance, digestibility, presence of toxic factors, species consuming the protein
how do you calculate the protein efficiency ratio (PER)?
PER = Wet Body Weight Gain (g)/Test Protein Consumed (DM)(g)
how do you determine the chemical score (CS)?
CS = (Abundance of first limiting amino acid in test protein / Abundance of same amino acid in whole egg) ×100
how is nitrogen balance calculated?
Nitrogen Intake (Diet) – Nitrogen Output/Losses (in urine, feces
what does a positive nitrogen balance indicate?
nitrogen, and presumably protein and lean body mass, are accumulating in the body;
what does a negative nitrogen balance indicate?
a loss in protein/lean body mass
what does a nitrogen balance of 0 indicate?
lean body mass is stable
what is Marasmus?
a very low intake of a reasonably balanced diet with around 8-10% protein
what does Marasmus eventually lead to?
a complete loss of body fat which causes a wrinkled appearance to the skin.
what is Kwashiorkor?
an unlimited intake of a diet very deficient in protein (1-2%)
- protein imbalance relative to other macronutrients
what are the results of Kwashiorkor?
a very disorganized utilization of body fuel
- low serum albumin, abnormal amino acids in plasma, edema, muscle wasting, and pancreas dysfunction.
what does the catabolism of a protein involve?
involves metabolism of two parts of the amino acid, the carbon skeleton and the nitrogen group.
what happens during protein catabolism?
proteins are broken down into their amino acid components, which are subsequently metabolized into two parts, the carbon skeleton (also known as a α-keto acid) and a nitrogen group (NH3, or ammonia).
what is the carbon skeleton used for?
energy, either through metabolism to glucose or acetyl CoA
what process breaks down proteins to their component amino acids?
proteolysis
what are the 2 possible fates for NH3?
the NH3 is metabolized into urea in the liver which travels to the kidney for excretion in the urine. In the other, the NH3 is released as NH4+ (always ammonium at physiological pH) in the kidney and is excreted in the urine in this form
what are TCA cycle intermediates used for?
immediately for energy, or they can be stored as glycogen
what are amino acids that are metabolized to energy called?
glucogenic amino acids
what are amino acids metabolized to acetyl CoA called?
ketogenic amino acids
what are the similarities between amino acids and α-ketoacids ?
include the presence of at least one carboxylic acid functional group
what are the differences between amino acids and α-ketoacids ?
α-ketoacids include at least one ketone, while amino acids do not
what are the 3 types of amino acids?
- Those that can be used to produce glucose only (exclusively glucogenic amino acids);
- Those that can be only be used to produce acetyl CoA (exclusively ketogenic amino acids); and
- Those that can be used to produce both glucose and acetyl CoA (glucogenic/ketogenic amino acids).
what happens to nitrogen in the fed state?
nitrogen is metabolized primarily through production of urea in the liver. The urea subsequently travels to the kidney for excretion in the urine
where does the urea cycle occur?
the liver ONLY
what happens to nitrogen in starvation?
nitrogen is metabolized primarily through conversion to ammonium (NH4+) in the kidneys. The ammonium is subsequently excreted in the urine.
where does the urea cycle receive nitrogen from?
- free NH3, which will come from an interorgan nitrogen carrier.
- amino acid aspartate, which can be formed from oxaloacetate
what amino acid does the urea cycle generate?
arginine
does the urea cycle require energy?
yes, in the form of ATP
when is there high activity of the urea cycle?
in the fed state
what does the urea cycle do in the fed state?
uses HCO3- as a substrate, thereby lowering levels and preventing alkalosis from occurring.
what happens during starvation regarding ketones?
, a buildup of acidic ketone bodies can cause blood pH to decrease, which is referred to as ketoacidosis, or ketosis.
what are the interurban nitrogen carriers?
glutamine and alanine
where does glutamine transport nitrogen?
both the liver and the kidneys
where does alanine mainly transport nitrogen?
liver
what is phase 1 of nitrogen metabolism?
Nitrogen moves from amino acids generated from protein breakdown onto the interorgan nitrogen carriers glutamine and alanine
what happens in phase 2 of nitrogen metabolism?
Once alanine and glutamine reach their target organs, nitrogen is removed from the interorgan nitrogen carriers.
what happens in phase 3 of nitrogen metabolism?
Nitrogen is excreted from the body in the urine
what is the primary form of nitrogen excretion in the fed state?
urea
what is the primary form of nitrogen excretion during starvation?
ammonium
what does the TCA cycle do?
generates reducing equivalents, energy, and CO2
what does lipolysis and beta oxidation achieve?
breakdown of lipids
what does lipogenesis achieve
synthesis of lipids
what must blood glucose be maintained between?
4-6 mmol/L
what must blood pH be maintained near?
pH 7.1-7.4
is glucose uptake in the liver regulated by insulin?
no
is glucose uptake in the muscle regulated by insulin?
yes
what are slow twitch fibres in the skeletal muscle used for?
These are used for long duration, slow contraction
what are fast twitch fibres in the skeletal muscle used for?
These are used for short duration, quick contraction.
what is the main energy source for slow twitch fibres?
Fatty acids (mainly derived from adipose tissue)
what is the main energy source for fast twitch fibres?
Blood glucose and muscle glycogen
is glucose uptake in adipose regulated by insulin?
yes
what is adipose an active site of?
lipogenesis, using blood glucose and lipids
what happens in adipose during anabolism?
, fatty acid uptake from chylomicrons/VLDL by action of lipoprotein lipase occurs
what happens in adipose during catabolism?
hormone sensitive lipase (HSL) releases fatty acids from triglyceride breakdown into circulation.`
is glucose uptake in the brain regulated by insulin?
no
how much glucose is required in the brain?
100-120 g / of glucose per day
what is insulin?
an anabolic hormone
- a 51 amino acid peptide secreted by the β-cells of the pancreas
what does insulin facilitate?
- glucose uptake in adipose and muscle
- glycogen and protein synthesis in muscle and liver, and fat synthesis (lipogenesis) and storage.
what does insulin inhibit?
proteolysis and gluconeogenesis.
what is glucagon?
- a catabolic hormone
- 29 amino acid peptide secreted by the α-cells of the pancreas.
what is secretion of glucagon stimulated by?
low blood glucose
what does glucagon facilitate?
breakdown of glycogen in liver and muscle, gluconeogenesis in the liver, proteolysis in extrahepatic tissue, and lipolysis in adipose.
what is cortisol made from?
made from cholesterol and secreted by the adrenal cortex of the adrenal gland.
what is the main action of cortisol?
increase proteolysis (protein breakdown), especially in the muscle, which releases amino acids that can be used for blood glucose control and energy
what does cortisol facilitate?
gluconeogenesis from glucogenic amino acids.
what is epinephrine?
- a catecholamine
- catabolic hormone
- is both a hormone and a neurotransmitter
what is epinephrine made from and what is it secreted by?
made from tyrosine and secreted by the adrenal medulla of the adrenal gland
what is epinephrine associated with?
fight or flight reaction
what does epinephrine facilitate?
glycogen breakdown and lipolysis
describe T3 (triiodothyronine)
the bioactive form of the hormone, and is made from T4
describe T4 (thyroxin)
actually considered the “prohormone” (or “precursor hormone”) to T3.
what s the duration of the fed state?
0-2 hours since last meal
what is the definition of the fed state?
the period during which blood glucose is supported directly by dietary carbohydrates or glucogenic amino acids.
what is the primary hormone associated with the fed state?
insulin
where is an active site of protein synthesis in the fed state?
muscle
what is the brain and RBC’s supported by in the fed state?
glucose from dietary intake
what is the duration of the post absorptive state?
2-12 hours since last meal
what is the definition of the post-absorptive state?
the period during which blood glucose is primarily supported by glycogenolysis (in the liver and muscle)
what is the primary hormone associated with the post-absorptive state?
glucagon
what will happen to the rate of glycogenolysis in the post-absorptive state?
it will drop
what are the brain and RBC’s supported by in the post-absorptive state?
by glucose from primarily from liver glycogen breakdown, with a small amount being produced from gluconeogenesis from lactate.