Acetyl-CoA Flashcards

1
Q

What is the structure of acetyl-CoA?

A

Comprises coenzyme A (CoA) plus an acetyl group attached via a reactive thiol group

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What are the sources of acetyl-CoA?

A
  1. Glucose to Pyruvate via glycolysis and pyruvate to acetyl-CoA via oxidative decarboxylation
  2. Certain amino acids to pyruvate via deamination and oxidation and pyruvate to acetyl-CoA via oxidative decarboxylation
  3. Fatty acids to acetyl-CoA via Beta-oxidation
  4. Certain amino acids to acetyl-CoA via deamination and oxidation
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What are the fates of acetyl-CoA?

A
  1. Fat
  2. Ketone Bodies
  3. Oxidation via TCA cycle
  4. Cholesterol
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Pyruvate dehydrogenase complex

A

Large enzymes that contains:

  • pyruvate decarboxylase (E1)
  • dihydrolipoyl transacetylase (E2)
  • dihydrolipoyl dehydrogenase (E3)
  • E3 binding protein

Converts pyruvate to acetyl-CoA via oxidative decarboxylation

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

Is pyruvate oxidized or reduced by pyruvate dehydrogenase?

A

Oxidized

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is a key point of metabolism involving pyruvate dehydrogenase complex? Why is this important?

A

Pyruvate dehydrogenase reaction is irreversible. No way back once pyruvate converts to acetyl-CoA

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Where is the pyruvate dehydrogenase complex found?

A

Mitochondrial matrix

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

How is pyruvate brought to the mitochondria?

A

Pyruvate generated in cytoplasm and crosses outer mitochondrial membrane via non-selective pore protein and then into the inner mitochondrial membrane via specific carrier protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What are the steps in the pyruvate dehydrogenase reaction?

A
  1. E1 decarboxylates pyruvate - intermediate forms with thiamine pyrophosphate (TPP)
  2. Intermediate oxidized to acetyl group and transferred to lipoamide group of E2
  3. Acetyl group transferred to CoA-SH by E2, forming acetyl-CoA
  4. Reduced lipoamide re-oxidized by E3 (FAD-dependent enzyme)
  5. FADH2 reoxidized by E3, electrons passing to NAD+ forming NADH
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What four different B vitamins are required for pyruvate dehydrogenase reaction?

A
  1. Thiamine (B1) - formation of TPP
  2. Riboflavin (B2) - Generation of FAD
  3. Niacin (B3) - Formation of NAD
  4. Pantothenic Acid - component of CoA-SH
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Thiamine deficiency

A

Dietary deficiency: polished rice lacks thiamine
alcoholism - inhibits thiamine uptake and conversion to TPP

Likely involves impairment of energy metabolism

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What steps in energy metabolism is thiamine required for?

A

Pyruvate dehydrogenase

alpha-ketoglutarate dehydrogenase complex - TCA cycle

Branched chain alpha-keto acid dehydrogenase - amino acid metabolism

Transketolase - glucose metabolism

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Beriberi

A

Dietary thiamine deficiency

Pain and paresthesia

Wet form - patient present with symptoms of congestive heart failure

Dry form - symmetric peripheral neuropathy

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

Wernicke encephalopathy

A

Thiamin deficient patient with chronic alcoholism

CNS impairment - mental impairment, cerebellar ataxia, horizontal nystagmus, ophthalmoplegia

Treatment by administration of thiamine

Can progress to Wernicke-Korsakoff syndrome (severe learning defect)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

Pyruvate dehydrogenase deficiency

A

Causes chronic lactic acidosis - can cause fatal lactic acidemia in neonates

Most pts experience severe neurological problems

Most common mutations impact pyruvate decarboxylase (E1)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

What products activate pyruvate dehydrogenase kinase?

A

Acetyl-CoA and NADH

17
Q

What inactivates pyruvate dehydrogenase complex?

A

Pyruvate dehydrogenase kinase which phosphorylates the complex

18
Q

What reactivates pyruvate dehydrogenase complex?

A

Pyruvate dehydrogenase phosphatase

19
Q

What inhibits pyruvate dehydrogenase kinase?

A

ADP and Pyruvate

20
Q

When is pyruvate dehydrogenase most active and least active?

A

Least active when energy needs are low and most active when energy needs are high

21
Q

Tricarboxylic acid cycle

A

Acetyl-CoA completely oxidized and generates reduced electron carriers and GTP.

Source of biosynthetic intermediates

22
Q

What is produced from TCA cycle?

A

2 Carbon dioxide
3 NADH
FADH2
GTP
3 H
CoA-SH

23
Q

What is important to note about the carbons in the TCA cycle?

A

2 carbons come in as an acetyl group and 2 carbons leave as CO2

No net synthesis when acetyl-CoA is oxidized in TCA cycle

24
Q

How much ATP is produced in TCA cycle?

A

Oxidation of 1 mol of acetyl-CoA could yield 10 mol of ATP

25
What regulates the TCA cycle?
Substrate availability Citrate synthase Isocitrate dehydrogenase Alpha-ketoglutarate dehydrogenase complex
26
How does substrate availability regulate the TCA cycle?
Activity of Pyruvate dehydrogenase controls one route of substrates to TCA cycle
27
How does citrate synthase regulate the TCA cycle?
Citrate synthase regulated by available oxaloacetate ATP, NADH, and succinyl-CoA inhibits citrate synthase
28
How does isocitrate dehydrogenase regulate the TCA cycle?
Allosteric Activation by ADP Potential inhibition by NADH
29
How does alpha-ketoglutarate dehydrogenase complex regulate the TCA cycle?
Activation by ADP Product inhibition by succinyl CoA and NADH
30
Fumarase deficiency
Grossly elevated urinary fumarate Extremely rare and only well characterized TCA cycle defect
31
Is there any net synthesis of intermediates in TCA?
No! 2 carbons in as acetyl-CoA and two carbons out as CO2
32
Anaplerotic reaction
Replenish TCA intermediates 1. Pyruvate carboxylase 2. Glutamate dehydrogenase 3. Generation of succinyl-CoA
33
Pyruvate carboxylase
Anaplerotic reaction Coverts pyruvate to oxaloacetate Enzyme of mitochondrial matrix. Activated by acetyl-CoA Expressed at high levels in liver and nervous tissue - use of TCA cycle intermediates for gluconeogenesis and neurotransmitter synthesis Contains prosthetic group formed from biotin which functions as carboxyl group carrier
34
Glutamate Dehydrogenase
Anaplerotic reaction Catalyzes conversion of glutamate to alpha-ketoglutarate --> fed into the TCA cycle Enzyme important for amino acid metabolism
35
Formation of succinyl-CoA
Propionyl-CoA produced by oxidation of odd chain fatty acids and certain amino acids. Converted to succinyl-CoA