A1.1: Water Flashcards
Water as medium of life
First cells -> watery environment (hydrothermal vents)
Water and solutes got trapped in membrane -> chemical reactions occur in the membrane bound structure -> evolution of cells
Water allows dissolved molecules to move around -> easily collide and react
Most life processes occur in water
Examples of hydrogen bonds importance in biological molecules
Dissolving solutes in water
Cohesion + adhesion of water molecules
-> allow water to move up (transpiration)
Base-pairing between two strand of DNA
Structure
-> H bonds help form secondary/tertiary structure of protein
-> H bonds found between strand of cellulose/collagen -> tensile strength
Interactions between mRNA and tRNA during protein synthesis
Surface effects on membrane between polar phosphate groups and water
Why is water so important?
Medium in which all metabolic reactions occur
70%-95% of the mass of a cell = water
So fundamental that:
71% of earths surface = water -> major habitat
Astronomers look for water as a sign of life
What is the structure of water (+ polarity)?
Each H shares a pair of electrons with O
Electrically neutral but:
Oxygen atom attract electrons more strongly -> slight negatively charge region (δ-)
Hydrogen atoms have a slight positively charged region (δ+)
-> also result of asymmetric shape
-> different charged regions -> water is polar
-> 2 unevenly charged regions -> dipole
-> charge -> attract to other water molecules
H bonds cause many of the properties of water molecules -> very important
Strength of H-bonds
Singular H bonds -> weak -> constantly breaking and reforming
Many H bonds -> stable structure, strong
How do hydrogen bonds contribute to the cohesion of water molecules?
Water -> polar -> can form hydrogen bonds
Single H bond -> weak
Many H bonds (1 water ->bond to three other in tetrahedral) -> stronger
H bonds within water allow for strong cohesion:
Columns of water move under tenions (mass transport) through xylem
Enable surface tension -> body of water meet air -> H bonds occur on the top later -> ‘film’ created
How do hydrogen bonds enable surface tension?
Caused by cohesive hydrogen bonding resisting an object trying to penetrate the surface
Near surface -> water form H bonds with each other but not air molecules
-> upwards force - acts like skin
What is adhesion?
Water molecules tend to stick to other molecules that are charged/polar for similar reason as why they stick to each other
Large number of H bonds give adhesive forces strength
-> enables transpiration
-> enables water drawn up narrow channels (capillary tubes) in soil -> capillary action
-> spaces between cellulose fibers in plant cell wall -> draw water from xylem vessels -> allow water to flow through plant
What is capillary action?
A combination of adhesion (water bond to a surface) and cohesion (water bond together)
Helpful in the movement of water during transpiration or drink water from straw
How does polarity affect the ability of a molecule to form H bonds with water? What does this have to do with water=universal solvent?
Polar -> charged -> can from H bonds and dissolve
-> hydrophilic
Nonpolar -> no charge -> cannot from hydrogen bond
-> hydrophobic
-> tend to group together (hydrophobic interaction)
—> water bonds with other water but not nonpolar molecules
Most biological molecules -> hydrophilic
Water -> universal solvent
What are the solvent properties of water?
Différent solute -> behave differently with water solvent
Water -> universal solvent
BUT different metabolites -> different solubilities in water
Different solutes -> different hydro-loving level -> affect solubility
Water as a solvent:
Soluble and insoluble molecules
Soluble:
Ex: NaCl, urea
Easily transported in solution within organisms
-> salts, glucose, AA
(AA does have hydrophobic R group but is soluble enough)
Insoluble:
Ex: fats
Nonpolar, hydrophobic molecules -> no dissolve
Function of molecules determine hydrophobic/insolubility
-> phospholipids have hydrophobic tails to help form cell membrane
-> different transport mechanism exist for insoluble/less soluble molecules
Water as a solvent:
Less soluble molecules
Low solubility molecules
Ex: oxygen -> require assistance -> combine with haemoglobin -> more/sufficient O can be transported
O less soluble at body temp than at 20°C
Oxygen -> sparingly soluble but soluble enough to allow it to be dissolved in oceans, rivers, etc. -> aquatic animals
What is waters role in enzyme action?
Most enzymes -> need water to hold shape/improve stability
-> Enables them to catalyze reactions in aqueous solutions
H bonds -> facilitate the bind of enzymes active site to substrate molecule -> enzyme substrate complex
What is specific heat capacity?
A measure of the energy required to raise the temperature of 1 kg of a substance by 1°C