9 Diagnostic Microbiology Flashcards

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1
Q

What is necessary for full and effective treatment?

A

The more you know about the organism causing the infection the better (species and strain)

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2
Q

What sort of samples can be collected?

A

Urine (in mid stream)
Blood
Cerebrospinal fluid
Swabs (prostate,up urethra, vaginal etc)

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3
Q

What is essential after the samples have been collected?

A

Essential that they are stored correctly and transportation must be suitable

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4
Q

How are organisms identified?

A

Staining (Gram staining) and specific growth medium

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5
Q

What factors need to be considered for the growth of organisms?

A

Aerobic vs anaerobic
Optimal temperature
Optimal pH
Length of time required for growth

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6
Q

What is a defined medium?

A

The exact chemicals required for growth are supplied

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7
Q

Undefined medium can contain material from sources such as…

A

Yeast extract
Proteolysed protein
Gelling agents for agar plates
Sterilised faecal samples

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8
Q

It is unlikely that a collected sample will be pure, why?

A

Because there will probably be different species in it

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9
Q

What does purification of the pathogen involve?

A

Differential selective media

Inclusion of antibiotics

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10
Q

What can be used to pick species of interest?

A

Differences in growth pattern eg morphology and colour

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11
Q

What is mannitol salts agar used for?

A

Isolation of Staphylococcus aureus, however related species can grow on it

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12
Q

What is so special about the mannitol salts agar?

A

Contains 7.5% [w/v] NaCl which prevents growth of Gram negative bacteria

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13
Q

What does phenol red on an MSA act as? And what happens during Mannitol fermentation?

A

Acts as a pH indicator

Mannitol fermentation drops (acidic) the pH which produces yellow zones

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14
Q

What happens when S. aureus uses the Mannitol?

A

MSA plates become yellow where it grows and other staphylococci remain red

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15
Q

How are bacteria identified phenotypically?

A

Morphology
Gram staining
Microscopic morphology
Growth on selective/differential medie

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16
Q

What do API test strips carry out?

A

A number of tests and the results can be compared with information in a database

17
Q

Other Identification tolls include immunological assays, what do these include?

A

Latex agglutination and ELISA

18
Q

What gene is generally used for the analysis of DNA?

A

16S rRNA gene

19
Q

Is it possible to determine DNA sequence of PCR product?

A

Yes by comparing to BLAST