7 and 8A Amino acids and Protein Secondary Structure Flashcards
How many amino acids do peptides have?
50 or less
How many amino acids do polypeptides and proteins have?
Greater than 50
What are zwitterions?
Molecules that have a positive and negative charge, and no net charge at pH 7
What type of side chains do acidic Amino Acids have?
Have a side chain with a carboxylate group that ionizes at physiological pH
How are amino acids characterized?
Characterized by their ability to interact with water
The only non-chiral standard amino acid is?
glycine
What is the Isoelectric Point (pI)
When amino acids have no net charge ue to ionization of both groups
Peptide bonds are formed by what type of reaction?
Amide linkages formed by nucleophilic acyl substitution (dehydration reaction)
How are Shiff bases formed?
By imine products of primary amine groups interacting with carbonyl groups, eg. in amino acid biosynthesis reactions.
What is a Schiff base?
Referred to as aldimines, are intermediates formed by the reaction of an amino group with an aldehyde group
How many standard amino acids are there?
20
How are amino acids amphoteric?
They have a carboxyl group which can act as an acid and an amino group that can act as a base
What are nonpolar amino acids (structurally)?
Contain hydrocarbon groups with no charge
What are polar amino acids?
They have functional groups that can easily interact with water through hydrogen bonding.
The functional group is either a hydroxyl group (serine, threonine and tyrosine etc.), thiol group (cysteine) or an amide group (asparigine, glutamine etc.)
What is the three and one letter abbreviation of asparigine?
ASN
N