6. Tissue homeostasis Flashcards

1
Q

Explain tissue homeostasis

A

Tissue homeostasis - long term turnover of adult tissues by stem cells

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2
Q

What is a stem cell?

A

Stem cell:
- cell that renews a continously turning over tissue
- cell that can renew a tissue in regeneration after injury

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3
Q

Why are stem cells needed?

A

To renew tissues - tissues which constantly experience insults from environment - need expendable cells - replace them with new ones (ex: gut villi)

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4
Q

What are the examples of high turnover tissues?

A
  • blood (blood cells short lived)
  • gut (lining of the gut due to environment)
  • skin (dead cells on the surface needed)
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5
Q

Why stem cells are used to renew tissues instead of differentiated cells?

A

Some differentiated cells:
- so highly specialised - lack nucleus -> can’t restore themselves with new cells
- lose DNA parts in differentiation

Stem cells - reservoir of original/unchanged cells

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6
Q

Why stem cells are used instead of highly proliferative cells to renew tissues?

A

Due to chance of mutation - if random mutation occurs - will be inherited by many cells (very fast dividing daughter cells) - cancer

Final differentiated cell may be completely non-proliferative

=> stem cells are slow dividing and potentially immortal = protected from mutations

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7
Q

What kind of choice does a stem cell have in division?

A

Stem cell can divide to give:
- a copy of itself
- differentiated cell
Also: symmetric / asymmetric division

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8
Q

What kind of divisions can a stem cell undergo?

A
  • symmetric division
  • asymmetric division
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9
Q

How can asymmetry in division be generated?

A

Assymetry generated by:
- the environment (neighbouring cells, ECM, GFs)
- inside the cell (localised cell somponents)

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10
Q

How were stem cells discovered?

A

From radiation effects - Till and McCulloch effects of whole body irradiation on haematopoietic system - linear relationship

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11
Q

How was it determined where haematopoietic cells are produced?

A

Haematopoietic cells produced in the spleen:

irradiated mouse was transplanted with bone marrow cells - many spleen colonies formed - # of spleen colonies directly proportional to # of transplanted bone marrow cells

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12
Q

How can it be determined if one transplanted bone marrow cell forms one spleen colony or not?

A

Need to use** several markers** for transplanted bone marrow cells:
- if spleen colonies only of **one marker **/ no marker -> each transplanted cell = a spleen colony
- if different markers observed -> a single transplanted cell can’t form one spleen colony

Marker: radiation - induces chromosomal breaks -> abnormal chromosomes - can be detected

Result => **all spleen colonies were pure **- one bone marrow cell = one spleen colony (single clonal haematopoietic cells) - differentiate into many cell types

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13
Q

Explain stem cell therapy for leukemia

A

Stem cell therapy:
- irradiation introduced to kill patient’s all bone marrow cells
- healthy bone marrow stem cells transplanted

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14
Q

Why are stem cells difficult to purify?

A
  • slow division
  • hidden in tissues rather than form tissues themselves
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15
Q

What proves that stem cells are a good solution to tissue growth?

A

Same stem cell mechanism in animals and plants (shoot and root meristems) - developed independently -> stem cells a good solution for tissue growth

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16
Q

What are the characteristics of adult stem cells?

A
  • slow dividing
  • potentially immortal
  • have restricted differentiation potential (ex: heamatopoietic cells can only differentiate into one of the heamatopoietic cell types)
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17
Q

Two examples of assymetric stem cell division in organisms

A
  • Drosophila reproductive system stem cells
  • Mammalian gut stem cells
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18
Q

Where do reproductive stem cells divide in female Drosophila?

A

Germline stem cells divide in germarium

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19
Q

What is the structure of female Drosophila germarium?

A

In a single germarium, structure:
- Terminal filament
- Cap cells
- Germline stem cells
- Cytoblast
Take Cat Get Crap

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20
Q

How can germarium be manipulated?

A
  • possible to remove cellls / organelles
  • possible to introduce DNA
  • possible to transplant different parts into other Drosophila
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21
Q

What is a stem cell niche?

A

Niche - the environment of a stem cell that provides needed factors (ex: signalling molecules) for stem cell maintenance

Niche can be other cell rather than whole environemnt

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22
Q

Explain the composition of female Drosophila germline stem cell division

A

GSC niche: cap cells - maintenance and number regulation:

2-3 GSCs per germarium undergo asymmetric division (intracellular components influence) - produce cytoblast - divides 4 times to produce 15 progenitor nurse cells and 1 oocyte

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23
Q

Explain Drosophila male vs female GSC location

A

*No need to know

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24
Q

What is the example of a gene regulating Drosophila GCS renewal (regulates numbers of stem cells)?

A
  • Bam (Bag-of-marbles) - regulates numbers of germ cells - secreted by niche - cap cells
  • mutants of Bam have excessive numbers of germ cells
  • When Bam is off - GSC can’t differentiate
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25
Q

How are asymmetric divisions achieved in GSCs in female Drosophila?

A

Asymmetry in GSCs generated:

Inside the cell:
Spectrosome - organelle of spectrin, contractile protein which mediates cell adhesion - spectrosome responsible for anchoring mitotic spindle - anchores GSC to the niche - necessary for signalling for GSC to remain GSC

Cell divisions are oriented with respect to the niche - oriented division - asymmetric division - one cell inherits spectrosome - remains a GSC - remains in contact with niche (cap cells) - the other develops

From environment:
- secreted signalling molecules (Bam) from cap cells

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26
Q

Explain the structure of mammalian gut villi in small intestine

A

Small intestine contains villus:
- villi - absorb nutrients
- crypts - contain gut stem cells (CBC) for gut renewal

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27
Q

What are the crypt based columnar cells (CBCs)?

A

Crypt based columnar cells (CBC) - small intestine stem cells (renew shedded villi cells) - in the crypt part of gut villi - express Lgr5 gene

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28
Q

Explain the experiment how can it be determined that Lgr5 expressing cells are stem cells

A

Permanently mark Lgr5 expressing cells - mark their descendants:
- engineer Lgr5 promoter for recombinant enzyme - also expression of LacZ in all descendants
- to choose the time when you want to see the descedants - engineer for the recombinant enzyme only to act when drug tamoxifen is present (can control when you want to add the drug)

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29
Q

What is the niche for crypt based columnar cells (CBC) in small intestine?

A

Niche for CBC (gut stem cells) (express Lgr5) - Paneth cells

30
Q

What signalling do Paneth cells secrete for CBC gut stem cells?

A

**Paneth cells **- niche for CBC gut stem cells - secrete Wnt3 gene - allows CBC cell survival

31
Q

How was it determined that Paneth cells are sufficient to sustain CBC gut stem cell survival?

A

CBC gut stem cells can form gut organoids in artificial matrix

    • when CBC and Paneth cells grown together - higher survival rate - higher potential to form gut organoids
32
Q

How was it determined that Wnt3 is sufficient to sustain CBC gut stem cell survival?

A

Wnt3 is sufficient to sustain CBC survival - not whole Paneth cell needed - when only Wnt3 added - same survival potential as when whole Paneth cell was present

Result: CBC (Lgr5) and Paneth cell doublet = same survival = CBC (Lgr5) doublet + Wnt3

33
Q

What kind of division do CBC gut stem cells undergo?

A

**CBC **gut stem cells divide symmetrically - identical daughter cells

34
Q

What was the experiment used to determine if CBC gut stem cells divide symmetrically or asymmetrically?

A

Cell labelling: asymmetrically dividing cells should retain one daughter cell in crypt - the other differentiate into villus:

  • CBC cells randomly labelled 4 colours - tamoxifen added => each crypt started as multicoloured - **turned single coloured **after 8 weeks => symmetric division
35
Q

Compare how Drosophila germarium maintain GSC stem cells and how mammalian gut villus maintain CBC gut stem cells?

A

Drosophila GSC divide asymmetrically - one cell remains a stem cells attached to niche

Gut CBC stem cells divide symmetrically (stem cell held by repulsive interactions between Ephb/EphrinB - flanking cells)

=> more than one way to maintain stem cells

36
Q

Give examples of organs with high cell turnover rate

A

Organs where cell death is high:
- gut
- skin
- hematopoietic system

37
Q

Give examples of organs with medium cell turnover rate

A

Turnover only when there is loss of cells due to external reasons:
- muscle (loss of cells due to mechanical stress)
- liver

38
Q

Give examples of organs with low cell turnover rate

A

Organs regenerate poorly:
- lens
- brain
- heart

39
Q

How does medium-dose radiation affect the hematopietic system and gut cells?

A

Hematopoietic system:
- kills bone marrow cells - stem cells

Gut cells:
- kills stem cells (CBC cells expressing Lgr5) - delayed failure in gut function - after 2-3 weeks

40
Q

What happens to Lgr5+ CBC cells after irradiation?

A

Lgr5+ stem cells killed in radiation - restored by previously non Lgr5+ cells - regenerate from transit amplifying cells (stem cell recovery cells)

41
Q

How can it be figured out what happens to Lgr5+ CBC cells after irradiation?

A

Lgr5+ CBC cell lineage tracing:
- label Lgr5+ cells with lacZ - labelled descendants
- irradiation - no lacZ label - all Lgr5+ cells killed

=> BUT mouse survives - gut regenerates Lgr5+ cells from previously Lgr5- cells - transit amplifying cells (stem cell recovery)

42
Q

Explain gut regeneration from organoids grown in vitro

A

Healthy gut stem cells - grown into organoid in vitro - transplanted into damaged gut - gut regenerated - engrafted cells function normally

43
Q

Explain how can assisted regeneration be used for skin regeneration

A

Basal layer cells cultured - formed 3 colonies: holoclone, meroclone, paraclone - only holoclone able to divide long-term - the stem cells - grown in vitro into tissues - transplanted

=> in vitro grown skin stem cells cnan be used for full recovery of 3rd degree burns (basal layer destroyed) - when restored only missing hair folicles and sweat glands

44
Q

Explain the structure of epidermis

A
  • Cornified layer - dead cells which are constantly shed
  • Suprabasal layer - differentiating cells
  • Basal layer - undifferentiated cells that are dividing (stem cells)
45
Q

Explain how skin grows and shed cells are regenerated

A

Basal layer cells - dividing stem cells - push cells into suprabasal layer - cells differentiate (lay protein matrix, enucleate and die providing barrier against pathogens / env) into epidermis cells - travel into cornified layer

46
Q

What are transit amplifying cells?

A

Transit amplifying cells - undifferentiated cells in transition between stem cells and differentiated cells

47
Q

How is muscle tissue regenerated?

A

Muscle tissue - satellite cells (muscle stem cells) - at edge of muscle fibers - in between basal membrane and ECM - Pax3+ expressing

48
Q

How are muscle stem cells called?

A

Satellite cells

49
Q

How can satellite cells be used for muscle regeneration?

A

Satellite cells (Pax3+) grafted into mouse damaged muscle (ex lacking dystrophin) - incorporate into tissue - healthy cells recovered

50
Q

What the are examples of organisms which have great regenerative powers?

A
  • Hydra
  • Planarian worms
  • Axolotl (salamander)

All use different regeneration mechanisms

51
Q

Explain the mechanism how hydra regenerates

A

When halved - generates two organisms
Mechanism: cells sense their position in organism - adjust gene expression

Dynamic gradients of diffusable molecules (ex Wnt) that specify head-foot regions => after halving gradient is restored before growth depending on the position of cells in organism

Hydra cells re-specify their cells

52
Q

Explain the mechanism how planarians regenerate

A

Many different outcomes fop cutting:

  • If halved - generates 2 organisms
  • cut into three equal pieces - generates 3 organisms
  • a cut piece is too thin - two heads - no morphogen gradient - abnormal regeneration
  • head cut first, then tail - the thin middle part forms 1 organism - time lag introduced morphogen gradient

Planarians use multipotent stem cells for regeneration - all cell types in regenerating body can be made

53
Q

Explain the mechanism how axolotl regenerates

A

Set organs which can be fully regenerated: limbs, tail, jaw, lens, heart

Limb regeneration: each cell types de-differentiates (all gene expression patterns lost), proliferates and re-differentiates (new gene expression patterns created)

54
Q

Compare the regeneration mechanisms used by hydra, planarians and axolotl

A

Hydra: re-specifies cells
Planarians: use multipotent stem cells
Axoltl: de-differentiate and re-differentiate cells

55
Q

What are the 3 situations where cells undergo controlled differentiation?

A
  • stem cell
  • regenerating cell
  • embryo cell
56
Q

Compare cell differentiation in stem cells, regenerating cells and embryo cells

A

Not all genes involved in embryo cells in development are used by regenerating cells in regeneration (development vs regeneration in limbds, gut)

=> adult stem cells + regenerating cells - not preserved embryonic cells BUT embryos have stem cells (ESC)

57
Q

Explain the function of Paneth cells in gut development vs maintenance

A

Development: Paneth cells **not needed **for survival (not confined in villus crypts) - embryonic gut proliferates without

Maintenance: CBC stem cells need Paneth cells (confined in villus crypts) for survival in adult gut crypts

=> CBC-Paneth cell relationship and villus structure differs in embryonic development vs adult life

58
Q

How can embryo development differentiation be defined (type fo differentiation)?

A

Progressive differentiation

59
Q

What gene is involved in maintaining cell pluripotency?

A

Nanog - expressed in inner cell mass (ICM) cells in pre-implantation blastocyst - gives rise to embryonic tissues - pluripotency - ICM source of ESCs

60
Q

How are ESCs derived and differentiated in vitro?

A

IVF - development - ESCs taken from ICM - cultured in vitro - needed factors introduced for specific development

61
Q

How does ESC culture halt embryo development / maintained in vitro?

A

ESC maintained on layer of ‘feeder’ cells - inactivated - don’t divide - provide signalling (LIF) for ESC maintenance

62
Q

What is LIF signal function in the embryo?

A

LIF scereted from extraembryonic part (trophoblast) - ICM have receptors for LIF - LIF maintains totipotency during diapause

63
Q

What is diapause? What is its function?

A

Diapause - a period of halted embryo development

Used to maximise breeding performance

64
Q

Explain mouse diapause

A

Mice recently given birth can ovulate - new litter of fertilised embryos held in diapause inside mother uterus without implanting - until mother looks after previous litter - embryos implant => maximise breeding efficiency

While in diapause ICM cells maintained by LIF - LIF receptor lacking cells not maintained in diapause

Diapause in hybernating animals is controlled by daylight

65
Q

Do embryos contain true stem cells?

A

Yes, ESC, true stem cells, are present in embryos but only transiently (12-24h in mice) - unless organism enter diapause (few weeks longer in mice as development is halted)

66
Q

Explain the experiment used to prove that ES cells are stem cells

A
  • ES cells need to show stem cells properties: unlimited self-renewal, ability to differentiate (if pluripotency - all cell types):
    add trypsin to form single cell solutions (dissociate tissues) - transfer to culture dish - isolate single cells from colonies using trypsin again => observe descendants - see if properties remain:
  • unlimited self-renewal: cells should constantly divide in vitro if proper env.
  • differentiation: reintroduce cells to embryos -> make up adult cells (developed organisms - chimeras)
67
Q

What stages in embryo development contain cells which can be arrested in a proliferative, non-differentiating state?

A
68
Q

Where are neural stem cells found in the embryo? What do they differentiate into?

A

Around the neural tube - can differenitiate to make neurons / glial cells

69
Q

What are the applications of human ESCs?

A
  • cell therapies: ESC replaces damaged cells (ex: Parkinson’s disease - loss of cells in Substantia nigra, diabetes - loss of beta cells in pancreas)
  • ESC for testing new pharmaceuticals
70
Q

What is the biggest challenge for stem cell differentiation in vitro?

A

To make stem cells differentiate into the target tissue - giving factors not enough - various cell types develop - difficult to create homogenous tissues