5.1: The Genetic Code and Cell Function Flashcards

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0
Q

Where does the process of D.N.A replication occur?

A

D.N.A replication takes place in the nucleus of a cell just before it divides.

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1
Q

What is D.N.A replication?

A

This is when D.N.A makes copies of itself.

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2
Q

For D.N.A replication to occur, what two things must be present in the nucleus?

A

Free (non-bonded) D.N.A. Nucleotides of the four types (A, T, C and G) An enzyme called D.N.A polymerase.

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3
Q

What are the three functions of D.N.A polymerase?

A

It progressively breaks down Hydrogen bonds between the base pairs, exposing them to the nucleus - D.N.A is unzipped. Following the base pairing rule it bonds free nucleotide bases with exposed nucleotide bases. -Ensuring that the correct base pairing takes place. It bonds pentose sugars to phosphates to form the sugar/phosphate backbone.

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4
Q

What is the end result of D.N.A replication?

A

The creation of two genetically identical D.N.A molecules. (I.e the base sequence is identical)

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5
Q

Outline the Semi-conservative D.N.A replication theory.

A

This hypothesises that D.N.A replicates in the following manner: 1.) D.N.A polymerase moves along the D.N.A molecule, unzipping it. 2.) The two unzipped strands now act as a template to which D.N.A polymerase bonds together free nucleotide phosphates according to the base pairing rule. This results in the creation of two identical D.N.A molecules, each containing a single strand of the original molecule.

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6
Q

Who created the theory of Semi-conservative D.N.A replication?

A

Meselson and Stahl.

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7
Q

His did Meselson and Stahl come up with their theory?

A

By looking at E.coli which has a generation time of 50 minutes at 36°C (I.e D.N.A replicates every 50 minutes) . They allowed E.coli to grow in a solution containing only the heavy Nitrogen isotope - ¹⁵N. Because of this the bacteria only incorporated ¹⁵N in their D.N.A and the bacteria had become “radioactively labeled”. The radioactive bacteria were then transferred into in environment only containing ¹⁴N. From this point on D.N.A samples were taken every 50 minutes and spun in a centrifuge containing CsCl for 20 hours. Under these conditions D.N.A sediments out depending on its density (I.e ¹⁵N is heavier than ¹⁴N D.N.A)

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8
Q

What were the results of Meselson’s and Stahl’s experiment?

A

As generations progressed a smaller and smaller proportion of D.N.A consisted of ¹⁴N/¹⁵N D.N.A and a greater proportion consisted of ¹⁴N D.N.A

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9
Q

What is the purpose of the Genetic code?

A

The purpose of the D.N.A base code is to represent the sequence of amino acids in a polypeptide chain.

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10
Q

What is the triplet code?

A

This means that each amino acid is coded for by three Bases.

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11
Q

What evidence is there for the triplet code?

A

A three base code is used is because a two base code I.e 4² can code for only 16 amino acids. While a one base code can code for only four amino acids.

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12
Q

What is a codon?

A

A base triplet which codes for a single amino acid.

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13
Q

In what respect is the genetic code universal?

A

In the respect that each amino acid is coded for by the same codon(s) in every living thing on earth.

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14
Q

Define a gene.

A

A sequence of D.N.A bases beginning at a start codon and ending at a stop codon and specifying the position of amino acids in a polypeptide chain.

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15
Q

What is transcription?

A

The process of copying a gene to produce m.R.N.A

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16
Q

What does transcription require?

A

R.N.A nucleotides (ribonucleoside triphosphates) and R.N.A polymerase. (D.N.A dependant R.N.A-polymerase)

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17
Q

What is the function of D.N.A dependant R.N.A-polymerase in transcription?

A

This enzyme operates as a code reader allowing the coding strand for one gene to be copied into R.N.A language.

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18
Q

What is the first stage in Transcription?

A

R.N.A polymerase locks on to the start codon of a gene.

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19
Q

What is the second stage in transcription?

A

there is space inside the enzyme for two codons and the enzyme breaks the Hydrogen bonds between the coding and non-coding bases in these two codons.

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20
Q

What is the third stage in transcription?

A

Breaking the Hydrogen bonds between the coding and non-coding strands exposes two D.N.A codons within the enzyme which are now bonded to R.N.A nucleotides using the base pairing rule.

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21
Q

What is the fourth stage in transcription?

A

These six R.N.A nucleotides are now sugar/phosphate bonded (phospho-ester link) before the hydrogen bonds securing them in place are broken.

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22
Q

What is the fifth stage in transcription?

A

The formation of the phospho-ester link allows the enzyme to move forward by one codon, exposing another three D.N.A bases and allowing the next R.N.A codon to be positioned.

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23
Q

What is the sixth stage in transcription?

A

the process continues along the entire length of the gene until the enzyme reaches the stop codon. At which point the enzyme detaches from the coding strand and the single stranded mR.N.A copy of the gene is detached.

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24
Q

What are introns?

A

Over time genes accumulate junk coding I.e D.N.A sequences which have no function. These are called introns.

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25
Q

Why must introns be removed from m.R.N.A before translation?

A

Unless these are removed the m.R.N.A molecule created will code for the wrong protein or a functionless protein.

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26
Q

By what process are introns removed?

A

Introns are removed by a process called splicing.

27
Q

What structures are responsible for splicing?

A

A large complex systems of molecules called a spliceosome.

28
Q

What does a spliceosome do?

A

These structures cut out the m.R.N.A introns and join the remaining sections - called exons - together, thus forming a functional m.R.N.A molecule.

29
Q

What happens after splicing has been completed?

A

The m.R.N.A molecule leaves the nucleus through the nuclear pore and becomes attached to a ribosome.

30
Q

What is translation?

A

Translation is the process by which a polypeptide is synthesized from the information contained in a molecule of messenger RNA (mRNA).

31
Q

What is the role of t.R.N.A in translation?

A

During translation t.R.N.A ensures that each amino acid is positioned next to its correct m.R.N.A codon. It acts as a “bridge” between codon sequence and amino acid sequence by having an anti-codon on one end and an amino acid on the other.

32
Q

What is the structure of t.R.N.A?

A

Each t.R.N.A has a different anti-codon depending on the amino acid it carries. The bonding of amino acids with t.R.N.A is an enzyme-controlled system which takes place in the cytoplasm.

33
Q

If an m.R.N.A codon reads AGA (arginine) what is the corresponding t.R.N.A anti-codon?

A

UCU

34
Q

What is the function of a ribosome?

A

This reads the m.R.N.A code and builds a polypeptide chain using t.R.N.A.

35
Q

What are ribosomes?

A

Ribosomes are complex molecular machines found in all living cells and in mitochondria and chloroplasts

36
Q

What are ribosomes made from?

A

Ribosomal R.N.A (r.R.N.A) and a variety of proteins.

37
Q

Where are ribosomes made in eukaryotic cells?

A
38
Q

What are the two main parts of the ribosome?

A

The small and large subunits.

39
Q

What are the sedimentation coefficients of the small and large subunits in eukaryotic ribosomes?

A

Small subunit - 40S

large subunit - 60S

40
Q

What are the sedimentation coefficients of the small and large subunits in prokaryotic (and chloroplast/mitochondrial) ribosomes?

A

Large subunit - 50S

Small subunit - 30S

41
Q

What is the function of the small subunit?

A

It acts as the code reader.

42
Q

What is the function of the large subunit?

A

The large subunit has space inside it for two t.R.N.A molecules and is responsible for joining amino acids together to form a polypeptide chain.

43
Q

What is the first stage of translation?

A
44
Q

What is the second stage of translation?

A
45
Q

What is the third stage of translation?

A

the ribosome now moves one codon forward exposing the second m.R.N.A codon to the large subunit then Codon/anti-codon bonding occurs again, placing the second amino acid in the correct position.

46
Q

What is the fourth stage of translation?

A

The first two amino acids are now bonded together by a peptide bond and the first t.R.N.A is now removed by breaking its codon/anti-codon hydrogen bonds and it’s attachment to amino acid #1.

47
Q

What is the fifth stage of translation?

A

The first t.R.N.A is now released, opening a space within the ribosome, allowing it to move one codon forward exposing the third m.R.N.A codon within the ribosome.

48
Q

What is the sixth stage of translation?

A

Codon/anti-codon bonding occurs again, positioning the next amino acid in the growing polypeptide chain. this process continues until the ribosome reaches the stop codon at which point it becomes detached from the m.R.N.A and the polypeptide is released.

49
Q

How is the process of translation made more efficient?

A

This process of translation is made more efficient by the recycling of t.R.N.A and by the fact m.R.N.A can be used many times.

50
Q

What Does The process of Meiosis Produce?

A

4 Haploid (n) cells.

51
Q

How are the Haploid gametes different?

A

Each haploid cell is genetically unique (Different from the rest and from the parent cell).

52
Q

Outline Interphase in meiosis.

A

This occurs in the same way as it does in Mitosis.

53
Q

How many phases are there in Mitosis - Prophase 1?

A

5

54
Q

What happens in Prophase 1 Phase 1?

A

Chromasomes appear as two chromatids each, held together by a centromere as a result of spirilization.

55
Q

What happens in prophase 1 - phase 2?

A

Hoimologous chromosomes pair up i.e Maternal and maternal chromosomes pair. The chromatid arms now wind tightly around eachother to form a bivalent. In Humans there would be 23 Bivalent structures.

56
Q

What happens in Prophase 1 - Phase 3?

A

The chromatid arms now form joining points called chiasmata (chiasma singular). There can be large numbers of chiasmata and their position is random.

57
Q

What happens in Prophase 1 - phase 4?

A

The Centromeres now repel causing the bivalent to unwind. This results in breakages occuring at chiasma followed by exchange of genetic material called crossing over. When this process has finished the homologous chromosomes have unwound but still remain paired.

58
Q

Why does crossing over result in genetic variation?

A

This is because homologous chromosomes contain different combinations of alleles.

59
Q

What happens during Prophase 1 - Phase 5?

A

The centrioles now produce a protien spindle structure. This is followed by the breakdown of the Nuclear membrane and the dissapearance of the nucleolus.

60
Q

What happens during Metaphase 1 in Meiosis?

A

The Bivalents now line up around the equator of the spindle forming two rings of chromosomes. (instead of one in mitosis)

61
Q

What happens during Anaphase 1 in meiosis?

A

The protein spindle fibres now contract, causing the homologous chromosomes in each bivalent pair to separate. These are pulled to opposite poles.

62
Q

What happens in Meiosis 2 - Prophase 2?

A

Centrioles move to opposite poles and the protien spindle reforms. The nucleolus breaks down, as does the nuclear membrane.

63
Q

What happens in Meiosis 2 - Metaphase 2?

A

The chromosomes now form one circle around the equator of the cell as in mitosis. The fact that each chromatid pair can be either way round at the equator increases the genetic variation produced by meiosis.

64
Q

What happens during Mitosis2 - Anaphase 2?

A

The chromatids are now separated and are moved to opposite poles

65
Q

What happens during Mitosis 2 - Teilophase 2?

A

Four haploid gametes are now created by cytokinesis. Each cell is genetically different from every other cell.

66
Q

What is the function of Mitosis?

A

This process occurs during sexual reproduction in living things to produce gametes with genetic variation due to crossing over in meiosis, This in turn produces a unique zygote cell because fertilisation is a random process. This allows living things the chance to adapt to change through natural selection and evolution.