3.1 Biological molecules Flashcards
What are monomers?
Give three examples
small molecular units from which larger molecules are made
(Monosaccharides, amino acids and nucleotides
What are polymers?
Give three examples
Molecules made from a large number of molecules joined together
(Carbohydrates, proteins, nucleic acids)
What is a condensation reaction?
joining two molecules together with the formation of a chemical bond and a water molecule
(Forming a disaccharide or polysaccharide)
What is a hydrolysis reaction?
breaks a chemical bond between two molecules and involves the use of a water molecule
What is the bond formed during a condensation reaction?
a GLYCOSIDIC bond
What are monosaccharides?
Give three examples
monomers from which larger carbohydrates are made
(Glucose, galactose, fructose)
What are disaccharides?
formed via the condensation of two monosaccharides
What are the three main disaccharides and what are they made from?
Maltose (2 glucose molecules)
Sucrose (1 glucose and 1 fructose)
Lactose (1 glucose and 1 galactose)
What is an isomer?
SAME molecular formula but the atoms are connected in a different way
What are the two isomers of glucose?
Alpha glucose (OH at bottom)
Beta glucose (OH at top)
What are polysaccharides and give three examples?
condensation of many (2+) glucose units
-Glycogen and starch are made of a-glucose
-cellulose is made of** b-glucose**
Give the structure and function of starch
Structure: amylose and amylopectin
Function: Main energy storage material in plants
* Insoluble so has no impact on water potential
* Compact so lots can be stored
* Release alpha glucose easily when hydrolysed due to the many branched ends in amylopectin - readily used in respiration
Give the structure and function of glycogen
Structure: alpha glucose joined by 1,4 and 1,6 glycosidic bonds
Function: Main energy storage material in animals
* insoluble so does not impact water potential
* Large so does not diffuse out of cells
* compact so lots can be stored
* more highly branches than starch - more rapidly broken down to form glucose which is important as animals have a higher metabolic rate and therefore respiratory rate than plants
Give the structure and function of cellulose
Structure: long chains of β-glucose joined together by 1,4 glycosidic bonds, many parallel hydrogen cross links for strength (straight and unbranched)
Function: structure in plant cell walls
* high tensile strength means plants can withstand osmotic pressure
How does cellulose get its strength?
Microfibrils- Strong fibres made of long cellulose chains joined parallel by hydrogen bonds
Give the structure of amylose
Unbranched helix-shaped chain with 1,4 glycosidic bonds between α-glucose molecules
* Coiled and compact so good for storage
Give the structure of amylopectin
1,4 glycosidic bonds between α-glucose molecules but also 1,6 glycosidic bonds form between glucose molecules creating a branched molecule
* enzymes can easily reach glycosidic bonds for faster glucose release in respiration
Describe the chemical test for reducing sugars
Benedicts test
* add benedicts to sample
* **heat **in water bath (that has been brought to the boil)
* Positive (Coloured precipitate, varying from green to brick red based on concentration)
Describe the chemical test for non-reducing sugars
- Add dilute Hcl to sample, place in water bath (addition of acid will hydrolyse any glycosidic bonds present in any carbohydrate molecules)
- add sodium hydrogencarbonate (neutralises solution)
- retest with benedicts in water bath
Describe the chemical test for starch
Iodine test
* add iodine dissolved in potassium iodide solution
* Starch present = Orange to blue-black
Potassium iodide is added as iodine is insoluble in water
What are triglycerides?
Energy storage molecule
formed by condensation of one molecule of glycerol and three fatty acids
What type of bond is formed during condensation of triglycerides and phospholipids?
ester bond
What type of bond is formed during condensation of amino acids?
peptide bond
(to form a polypeptide-protein)
What are the properties of a saturated fatty acid R-group?
No double bonds between carbons
(Animal fats)
What are the properties of an unsaturated fatty acid R-group?
1+ double bonds
(Molecule bends so liquid at room temp)
What are the 3 elements which make up lipids ?
carbon, hydrogen and oxygen
Describe the structure and properties of triglycerides
- ** Long hydrocarbon tails** = when triglycerides are oxidised during respiration this causes these bonds to break releasing more energy per gram than carbs or protein
- form insoluble droplets which are hydrophobic = no impact on water potential so can be stored
- low mass to energy ratio = lots of energy in a small volume
- high ratio of hydrogen to oxygen atoms so water is released when oxidised
- Also provides buyoncy and insulation
Fatty acid tails are hydrophobic while glycerol molecules are hydrophillic
What are phospholipids?
Bilayer of cell membranes
one of the fatty acids is replaced by a phosphate containing group
Describe the structure and properties of phospholipids
- Bilayer (Polar phosphate points outwards, non-polar fatty acid points inwards creating a hydrophobic core) = barrier to water soluble molecules
Fatty acid tails are hydrophobic while phoshate group is hydrophillic
Are triglycerides polar or non-polar?
Non-polar (hydrophobic so do not impact water potential)
Are phospholipids polar or non-polar?
Polar phosphate head (but non-polar fatty acid tails)
Describe the chemical test for lipids
* Shake test solution with ethanol
* Add to water and shake
* Cloudy white emulsion shows a positive test
Give the main four uses of lipids
- cell membranes
- energy - twice as much as carbohydrates or protein
- waterproofing - insoluble in water
- insulation - fats are slow conductors of heat and act as electrical insulators around the mylein sheath
- protection around delicate organs
What are amino acids?
See diagram via link
monomers from which proteins are made
http://www.a-levelnotes.co.uk/uploads/9/6/0/2/96027112/published/52-amino-acid-structure.png?1566484809
How many types of amino acids are there?
20 (only the side chain (R) changes
What type of bond is formed between a condensation reaction of two amino acids?
Peptide bond
How is a peptide bond formed?
hydroxyl (-OH) is lost from the carboxylic group of one amino acid and a hydrogen atom is lost from the amine group of another amino acid
-The remaining **carbon and nitrogen **atoms then bond
What are dipeptides?
Formed by the condensation of two amino acids
What are polypeptides?
Formed by the condensation of many amino acids
What is a functional protein?
may contain one or more polypeptides
(These include haemoglobin, insulin, enzymes)
Describe the primary structure of proteins
specific sequence of amino acids in a polypeptide chain (DNA arranges order of amino acids in the primary structure)
Amino acids are joined by COVALENT PEPTIDE bonds
Describe the secondary structure of proteins
Hydrogen bonds form between the amino acids, causing them to coil/fold
weak negatively charged nitrogen and oxygen atoms interact with the weak positively charged hydrogen atoms
What is the alpha helix?
amino acids COIL, forming hydrogen bonds between every fourth peptide bond
Type of secondary structure
What is the beta pleated sheet?
amino acids FOLD, 2 parts of chain are parallel so hydrogen bonds form between peptide bonds
Type of secondary structure
Describe the tertiary structure of proteins
Further coiling/folding so more bonds form (between the R groups)
Describe the role of hydrogen bonds in tertiary proteins
Where do they form ?
form between strongly polar (Hydrophillic) R groups
-Weakest but most common bond
R groups
Describe the role of ionic bonds in tertiary protein structure
form between positively charged amine and negatively charged** carboxylic acid** R groups
-Stronger than hydrogen bonds but uncommon
CHARGED R groups