2.1 test Flashcards
Types of genetic tests
Carrier screening (for heterozygotes of recessive diseases)
PGD (preimplantation genetic diagnosis - used with IVF)
Fetal screening (includes amniocentesis, chorionic villi sampling, and ultrasound)
Newborn screening (routine tests shortly after baby is born)
PGD
Preimplantation genetic diagnosis - must be used with IVF to determine a genetic condition before an embryo is implanted in the uterus
Single cell is removed from an embryo and examined; parents/doctors can choose which embryo to implant
Egg + sperm combine to form a blastocyst, whose DNA/chromosomes are then examined
Amniocentesis
- Weeks 14-20
- Needle inserted through abdomen to uterus
- Sample is of amniotic fluid (liquid that cushions and surrounds the amniotic sac), which contains fetal cells
- Can detect neural tube defects
CVS
- Weeks 10-12
- 2 options- catheter through cervix or needle through abdomen
- Sample is from chorionic villus cells (from the placenta, whose DNA is the same as the fetus’ DNA)
- Cannot detect neural tube defects
Ultrasound
- Can image non-hollow organs like gallbladder, liver, pancreas, etc.
- Cannot image lungs (too much air for ultrasound waves to be transmitted), and waves also cannot pass through bone
- Can image liquid around bones or air-filled organs but not the actual structures
Newborn screening
Screen for 4-30 genetic/metabolic disorders when the baby is 1-2 days old
Cystic Fibrosis
Autosomal recessive
Treatment- antibiotics and mucus-thinning drugs
Huntington’s
Autosomal dominant
Neuron degeneration, leading to mental decline
Treatment- PT, drugs to help with chorea (haloperidol, tetrabenazine, etc.)
Duchenne Muscular Dystrophy
X-linked recessive trait
Dystrophin gene is mutated -> progressive muscle degeneration and weakness
Leber hereditary optic neuropathy
- Mitochondrial disorder - passed down through mother’s DNA
- Vision loss, blindness
Alzheimer’s
Autosomal dominant
Multifactorial condition (mutations in multiple genes and environmental causes
PCR temperatures
Denature- 94 to 96 deg. C
Anneal- 50 to 65 deg. C
Extend- 72 deg. C
PCR steps
1) High temperatures break down hydrogen bonds between complementary bases in DNA, causing the 2 strands to separate
2) Primers bind to DNA to mark where Taq polymerase will add nucleotides
3) Taq polymerase attaches to the primers and works in the 3’ to 5’ direction
Restriction enzyme digest for PTC alleles (T & t)
Enzyme HaeIII cuts the sequence GG | CC
GGCC is only present in the dominant PTC allele (T) -> 2 fragments per allele are produced
GCC is present in the recessive PTC allele (t) -> HaeIII does not cut -> 1 whole, uncut fragment per allele
TT- 2 bands
Tt- 3 bands
Tt- 1 band
SNPs
Single-nucleotide polymorphism- a segment of DNA that has a variation in just 1 nucleotide
Can occur in a non-coding region -> no impact; but can change protein folding if it occurs in a coding region