20-21 Infectious Disease Lecture 1 and 2 Flashcards

1
Q

Definitions

  • Gastroenteritis
    • ?
    • characterized by/
  • Diarrhea
    • ?
    • defined as/
    • In bacterial gastroenteritis, diarrhea often results from/
  • Dysentery usually involves/
A
  • Gastroenteritis:
    • a syndrome involving inflammation of the stomach and intestines
    • characterized by gastrointestinal symptoms such as vomiting, diarrhea, abdominal cramps and nausea.
  • Diarrhea
    • the most common consequence of these infections
    • defined as a frequent, and usually profuse, watery discharge.
    • In bacterial gastroenteritis, diarrhea often results from toxins and usually involves the small intestine.
  • Dysentery usually involves
    • frequent, low volume stools containing blood and pus.
    • inflammation (often from pathogen invasion into the intestines)
    • the colon.
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2
Q

Gastroenteritis

  • Frequency of gastroenteritis
    • frequency
    • occurs in/
    • high risk populations
    • worldwide, diarrheal illnesses/
  • Transmission
  • Outcome of Exposure depend upon/
  • Virulence of Some GI Pathogens
  • Agents
    • viruses
    • bacteria
A
  • Frequency of gastroenteritis
    • Gastroenteritis is extremely common
    • Occurs in both children and adults, but is a particular problem with young children <2 years
    • high risk populations: e.g., children in day care centers, patients receiving antibiotics, the immunocompromised, travelers to underdeveloped countries.
    • Worldwide, diarrheal illnesses are the second leading cause of death
  • Transmission
    • usually acquired by ingestion;
    • often (but not always) involves fecal-oral transmission.
  • Outcome of Exposure depend upon
    • the virulence of the pathogen and host GI tract defenses.
  • Virulence of Some GI Pathogens
    • Shigella spp. > Campylobacter jejuni > Nontyphoid Salmonella > Vibrio cholerae > Giardia spp.
    • Viruses like norovirus are also often exceptionally virulent (low ID50)
  • Agents
    • viruses cause most gastroenteritis in the USA.
    • bacteria cause most of the severe cases.
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3
Q

Defenses Present in the Human GI Tract

A
  • normal flora-compete out microorganisms (including some pathogens)
  • gastric acid-kills many ingested microorganisms
  • motility-helps remove many ingested microorganisms
  • mucus-forms a protective layer that microorganisms (or their toxins) must penetrate
  • bile
  • shedding and replacement of the epithelium
  • IgA- inhibits microbial adherence to intestines and neutralizes toxins
  • local lymphoid tissue-besides producing IgA, also helps to fight invasive microorganisms (cellular immunity)
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4
Q

Mechanisms of Infectious Diarrhea/Gastroenteritis (p.12-17)

  • Increased Secretion
  • Decreased Absorption from Intestinal Damage
  • Inflammation
  • Changed GI motility
A
  • Increased Secretion:
    • from enterotoxins (e.g., cholera, ETEC)
  • Decreased Absorption from Intestinal Damage
    • high osmotic pressure in lumen then causes diarrhea
    • viral (e.g., rotaviruses, noroviruses)
    • enterotoxin-mediated (e.g., C. perfringens type A food poisoning)
  • Inflammation:
    • usually results from invasion (e.g., Salmonella, Shigella)
    • can also result from an enterotoxin with proinflammatory properties (e.g., Clostridium difficile).
    • Inflammatory diarrheas often result in increased fecal leukocytes
  • Changed GI motility:
    • e.g., during viral gastroenteritis, viruses may impede gastric emptying, which triggers vomiting.
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5
Q

Epidemiology of Gastroenteritis:
Endemic Infections

  • Definition
  • Examples in USA
  • Who’s affected
A
  • Definition: diseases that occur in the usual living conditions of the patient and their family.
  • Examples in USA:
    • rotaviruses and other viruses (e.g., enteric adenoviruses) causing viral gastroenteritis.
    • involve brief incubation periods, vomiting and diarrhea (sometimes fever), and fecal-oral spread.
  • Who’s affected: particularly common and severe in infants and young children because of their lower immune function and the spread of these viruses by the fecal-oral route.
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6
Q

Rotaviruses (p.28)

  • organism
  • transmission
  • clinical
  • pathogenesis
  • diagnosis
  • treatment
  • vaccine
A
  • organism: Reovirus with segmented ds RNA genome.
  • transmission: fecal-oral route, most common in winter.
  • clinical:
    • prevaccination was the most common cause of diarrhea in young children (also affect the elderly);
    • Often a severe diarrhea, with vomiting and fever; 1-2 day incubation, illness lasts up to 1 week.
    • Can be fatal.
  • pathogenesis: kills intestinal cells, resulting in malabsorption;
    • may make an enterotoxin?
  • diagnosis: antigen detection in stool; EM.
  • treatment: rehydration.
  • vaccine:
    • now given universally at 2,4 and 6 months (RotaTeq) or 2 and 4 months (RotaRix);
    • >85% effective in preventing severe illness.
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7
Q

Epidemiology of Gastroenteritis:
Epidemic Infections

  • Definition
  • Who’s affected
  • Where
  • Agents
A
  • Definition: diseases that occur in large clusters beyond the family unit.
  • Who’s affected: usually result from breakdown in public health sanitary measures.
  • Where: very common in developing countries (e.g., cholera).
  • Agents:
    • Worldwide, these include many agents (most notably, Vibrio cholerae, see below).
    • uncommon in USA, but do occur, e.g., outbreak of cryptosporidiosis in Milwaukee in the early 1990’s was due to breakdown in water treatment; recent cruise ship outbreaks due to Noroviruses.
    • Among leading cause of waterborne diseases in USA are Cryptosporidium parvum and Giardia spp.
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8
Q

Vibrio cholerae (p.14-15+34+37+41-42)

  • organism
  • transmission
  • clinical
  • pathogenesis
  • diagnosis
  • treatment
  • control
A
  • organism: Gram-negative bacterial rod (oxidase-positive).
  • transmission: fecally-contaminated water (also food).
  • clinical: Severe dehydration due to fluid/electrolyte loss (some vomiting) that can lead to cardiac, kidney, etc. malfunction.
  • pathogenesis:
    • mediated by an enterotoxin that increases intestinal cyclic AMP, activating chloride secretion.
    • Watery diarrhea-no inflammation.
  • diagnosis: Culture.
  • treatment: Fluid/electrolyte replacement and antibiotics.
  • control: Water sanitation, vaccines?
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9
Q

Noroviruses (p.44)

  • organism
  • transmission
  • clinical picture
  • pathogenesis
  • diagnosis
  • treatment
  • control
A
  • organism: Group of caliciviruses (ss RNA virus), e.g., Norwalk virus
  • transmission:
    • Fecal-oral, often from ingestion of fecally-contaminated food or water
    • can also involve direct ingestion.
    • Easily spread
    • Often occurs in epidemics;
    • Persistent shedding?
  • clinical picture:
    • More common cause of gastroenteritis in adults and older children than rotavirus.
    • Typical symptoms of viral gastroenteritis (like rotavirus), i.e.,vomiting and diarrhea.
    • Sudden onset.
    • Incubation period is 1/2 day to 2 days; lasts for 1-2 days.
  • pathogenesis: Causes damage to the intestinal mucosa, resulting in malabsorption
  • diagnosis: EM or serologic tests for antigens in feces; PCR
  • treatment: Fluid and electrolyte replacement.
  • control: Handwashing, careful food/water preparation, disinfect contaminated surfaces (fairly difficult- use 10% bleach).
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10
Q

Epidemiology of Gastroenteritis:
Food Poisoning

  • Definition
  • Agents
  • Contributing factors
  • Bacterial foodborne diseases can be either intoxications or infections:
    • Intoxications
      • Foodborne botulism
      • Staphylococcal food poisoning and Bacillus cereus emetic food poisoning (emetic form)
A
  • Definition: food is the transmission vehicle.
  • Agents: ~40% from bacteria, ~60% from viruses (e.g., noroviruses), 1% from parasites (e.g., Cyclospora) and 2-3% from chemicals.
  • Contributing factors: improper cooking or storage of foods.
  • Bacterial foodborne diseases can be either intoxications or infections:
    • Intoxications-no viable pathogen need be ingested, only a microbial toxin.
      • Foodborne botulism (Clostridium botulinum makes an incredibly powerful neurotoxin with a neuron-specific proteolytic activity).
        • Causes flaccid paralysis.
        • Can be fatal.
      • Staphylococcal food poisoning and Bacillus cereus emetic food poisoning (emetic form); both involve vomiting and some diarrhea.
        • Onset is very fast (<6 hours).
        • Caused by heat-stable enterotoxins (probably have a neurotoxic action).
        • Not usually fecal-oral spread.
        • Treatment is symptomatic.
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11
Q
Epidemiology of Gastroenteritis:
Food Poisoning (p.61)
  • Bacterial foodborne diseases can be either intoxications or infections:
    • Infections
      • In vivo toxin production examples
      • Invasion
A
  • Bacterial foodborne diseases can be either intoxications or infections:
    • Infections-viable pathogen must be ingested. Can involve either in vivo toxin production or invasion.
      • In vivo toxin production examples: Clostridium perfringens, B. cereus diarrheal form of food poisoning and EHEC (e.g., E. coli O157).
        • Diarrheal symptoms vary in development from 8-16 hours (C. perfringens, B. cereus diarrheal form) to ~4 days (E. coli O157:H7).
        • Treatment is symptomatic (no antibiotics).
      • Invasion-symptoms often include fever (from inflammation) as well as diarrhea.
        • Can be limited invasion involving pathogens such as Shigella spp., Campylobacter jejuni, or nontyphoid Salmonella.
        • Alternatively, can involve systemic invasion, notably Salmonella typhi, which causes typhoid fever.
        • Invasives cause disease with relatively slow onset (>16 hours to several days).
        • Fecal leucocytes are often elevated.
        • Treatment may include antimicrobials.
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12
Q

EHEC (Enterohaemorrhagic E. coli) (p.56)

  • organism
  • transmission
  • clinical picture
  • pathogenesis
  • diagnosis
  • treatment
A
  • organism: Gram-negative bacterial rod, these E. coli include O157:H7.
  • transmission: ingestion of contaminated foods (e.g., hamburgers, apple cider). Also petting zoos!
  • clinical picture: Causes two illnesses;
    • Hemorhhagic colitis,
      • shiga toxin primarily affects the colon.
      • Causes bloody diarrhea but no bacterial invasion (so usually few or no fecal leukocytes or substantial fever).
      • Children and elderly most often become ill.
      • Disease develops about 4 days after ingestion of contaminated food and lasts about a week.
    • Hemolytic uremic syndrome:
      • mostly in children
      • ~10% of HC cases, sufficient amounts of shiga toxin are absorbed from the gut to enter the circulation and damage the kidneys.
      • This causes acute renal failure.
      • Life-threatening.
  • pathogenesis:
    • Symptoms result primarily from production of shiga toxin in the colon.
    • Shiga toxin kills mammalian cells by inhibiting protein synthesis.
  • diagnosis: Isolation by culturing and DNA hybridization tests for shiga toxin genes or serologic tests for shiga toxin production.
  • treatment:
    • For HUS, may require dialysis.
    • For HC, fluid replacement.
    • Antimicrobials generally considered ineffective and may be harmful.
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13
Q

Salmonella spp. (p.18-19)

  • organism
  • transmission
  • clinical picture
  • pathogenesis
  • diagnosis
  • treatment
  • vaccine
A
  • organism:
    • Gram-negative bacterial rod, belong to Enterobacteriaceae
    • S. typhi (causes typhoid fever)
    • nontyphoid Salmonella (cause gastroenteritis and, less commonly, septicemia).
  • transmission: Fecal-oral route;
    • nontyphoid Salmonella are the #1 cause of bacterial food borne disease in the USA (millions of cases/year);
    • typhoid fever still important in developing countries. Can be carriers.
  • clinical picture:
    • For typhoid fever, multiorgan disease with fever, diarrhea (late), can lead to intestinal perforation. Slow developing.
    • For nontypoid Salmonella gastroenteritis, nausea, vomiting, cramps and diarrhea, with fever in >50% of patients. Develops about 1-2 days after ingestion of contaminated food.
  • pathogenesis:
    • Both S. typhi and nontyphoid Salmonella invade through M cells into the Peyer’s Patches.
    • Nontyphoid Salmonella remain localized at the intestines,
    • S. typhi can survive in macrophages and is transported in these cells to reticuloendothelial tissue throughout the body (particularly to the liver).
    • Symptoms result from invasion-induced inflammation (at least in part, caused by endotoxin).
  • diagnosis: Culture and serotyping.
  • treatment:
    • Antimicrobials may be used for gastroenteritis, along with fluid and electrolyte replacement.
    • They are routinely used for typhoid fever.
  • vaccine: available for typhoid fevers (travelers to developing countries)
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14
Q

Epidemiology of Gastroenteritis:
Hospital-Acquired Gastroenteritis

  • Who’s affected
  • Agents
  • Cause
  • Treatment
  • Relapse
A
  • Who’s affected:
    • institutionalized patients, particularly those receiving antimicrobial therapy, are at increased risk for developing diarrheal disease.
    • Risk increases with age.
  • Agents:
    • range in severity
    • mild diarrhea (a mild infection with C. difficile or an infection with enterotoxigenic C. perfringens)
    • life-threatening (a severe case of C. difficile-mediated pseudomembranous colitis and/or toxic megacolon).
  • Cause: antimicrobials disturb normal GI flora, opening opportunities for pathogens to grow in GI tract.
  • Treatment: first step in treatment is usually to discontinue current antimicrobial, then treat with an effective antimicrobial against offending pathogen.
  • Relapse: even with effective antimicrobial therapy, can have relapses (often due to spores).
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15
Q

Clostridium difficile (p.72-75)

  • organism
  • transmission
  • clinical picture
  • pathogenesis
  • diagnosis
  • treatment
  • Prevention
A
  • organism: Gram-positive, anaerobic, spore-forming rod.
  • transmission:
    • Incidence of C. difficile GI disease has doubled since 2000.
    • Infections also becoming more severe/fatal.
    • Classical nosocomial infection involves hospital/nursing home environment with environmental person-to-person transmission.
    • New epidemic strain: makes more toxins A and B, another toxin named CDT, more antibiotic resistant. First noted in Quebec (and Pittsburgh).
  • clinical picture: Disease ranges from
    • antibiotic-associated diarrhea ( a mild diarrhea)
    • pseudomembranous colitis (can involve systemic symptoms, such as high fever, along with severe dehydration).
    • 1-3% develop toxic megacolon-rapidly fatal due to colonic perforation.
  • pathogenesis:
    • Mediated by toxins (A and B) that damage the colonic mucosa by glucosylating Rho proteins.
    • These toxins induce a severe inflammation.
  • diagnosis: Perform fecal toxin tests for toxins A and B.
  • treatment:
    • Fluid/electrolyte replacement and antimicrobials (e.g., metronidazole or vancomycin).
    • Fidaxomicin
    • Fecal transplants?
  • Prevention: gloves, handwashing, restrict equipment, disinfection (10% bleach)
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16
Q

Epidemiology of Gastroenteritis:
Gastroenteritis in Immunocompromised People

  • Agents
    • Immunocompromised are more sensitive to/
    • Immunocompromised are also affected by/
  • Who’s affected
A
  • Agents:
    • Immunocompromised are more sensitive to “true GI pathogens” (such as Salmonella and Shigella)
      • i.e., lower doses are needed to cause an infection and disease is often more severe and long-lasting.
    • Immunocompromised are also affected by unusual opportunists that don’t normally cause GI disease.
  • Who’s affected:
    • transplant recipients
      • often viruses are responsible (most commonly cytomegalovirus or Epstein-Barr virus)
    • AIDS patients
      • 50-60% of AIDS patients in the US develop a diarrhea disease-these can become prolonged, life threatening illnesses.
      • These can be difficult to manage.
17
Q

Some Common Causes of Diarrhea in AIDS Patients

A

Entamoeba histolytica (a parasite)
Cryptosporidium parvum
Giardia spp.
Isospora (a parasite)
Salmonella spp.
Shigella spp.
Campylobacter jejuni
Mycobacterium avium intracellulare
Cytomegalovirus
Herpes simplex virus

18
Q

Cryptosporidium parvum

  • organism
  • transmission
  • clinical
  • pathogenesis
  • diagnosis
  • treatment
A
  • organism: Parasite that forms resistant cyst.
  • transmission: Fecal-oral contamination, e.g., drinking contaminated water. Animal reservoir.
  • clinical: Ranges
    • moderate diarrhea lasting up to several weeks (in immunocompetent)
    • serious diarrhea that becomes chronic in immunodeficient (may contribute to death).
  • pathogenesis: Not well understood.
  • diagnosis: Staining of concentrated feces with a modified acid-fast stain to show cysts.
  • treatment:
    • No really effective antimicrobial treatment for immunocompromised adults at present (paromomycin sometimes used for AIDS patients).
    • Improvement of immune status due to antiretroviral therapy can lessen cryptosporidiosis in AIDS patients.
    • Nitazoxanide is FDA-approved for treatment of people with healthy immune systems.
19
Q

Epidemiology of Gastroenteritis:
Traveler’s Diarrhe

  • Frequency
  • Agents
  • Prophylaxis
  • Treatment
A
  • Frequency: with increased business, military, and vacation travel, these are becoming a more common problem.
  • Agents: most common cause is ETEC, but many other microorganisms (including viruses) can also cause this illness-can involve more exotic organisms than found domestically.
  • Prophylaxis: efficacy unclear, may promote antibiotic resistance.
  • Treatment:
    • adult overseas traveler might take thermometer, loperamide (an anti-intestinal motility agent) and broad-spectrum antimicrobial with them.
    • If they become sick, they should take their temperature.
      • If no fever, use loperamide.
      • If fever, take antimicrobial (good chance caused by invasive bacterium).
20
Q

Enterotoxigenic E. coli (ETEC)

  • organism
  • transmission
  • clinical picture
  • pathogenesis
  • diagnosis
  • treatment
A
  • organism: Gram-negative bacterial rod. Belongs to Enterobacteriacae.
  • transmission: Fecal-oral; usually through contaminated foods or water.
  • clinical picture: Watery diarrhea (no fever).
  • pathogenesis: Involves enterotoxins, heat-labile enterotoxin (which acts like cholera toxin and increases intestinal cAMP) and/or heat-stable enterotoxin (which increases intestinal cGMP).
  • diagnosis: Isolate by culture and do DNA tests for presence of toxin genes.
  • treatment: Fluid/electrolyte replacement and symptomatic.
21
Q

Diagnosis of Gastroenteritis

  • First step is to obtain a good history:
  • If mild, watery diarrhea with no fever
  • If fever or bloody diarrhea (or patient is immunocompromised or taking antibiotics):
A
  • First step is to obtain a good history:
    • Recent travels?
    • Does the patient know anyone else who is also sick (identifying a common source)?
    • What are the symptoms? Diarrhea? Vomiting? Fever?
    • When did symptoms start?
    • Frequency of bowel movements? Is the stool bloody?
    • Recent antibiotic use?
    • Remember: not all diarrhea, etc. is from infectious agents.
  • If mild, watery diarrhea with no fever: Usually just treat symptomatically (no further diagnostic tests unless illness does not go away).
  • If fever or bloody diarrhea (or patient is immunocompromised or taking antibiotics):
    • Do a microscopic exam for fecal leukocytes (may also show parasites).
    • Culture for routine GI pathogens (e.g., Salmonella, Shigella); if patient is sufficiently immunosuppressed may need to consider more exotics if the patient doesn’t respond but don’t try initially to culture all these -too expensive.
    • C. difficile toxin test, if appropriate.
22
Q

Management of Gastroenteritis (p.92)

  • In the immunocompetent:
    • Always address…
      • For mild diarrhea
      • for moderate diarrhea
      • for serious diarrhea
    • If noninflammatory diarrhea
    • Symptomatic therapy for noninflammatory diarrhea:
    • If inflammatory diarrhea (blood, fever, fecal leukocytes):
  • In AIDS / immunocompromised patients
    • If routine cultures show a typical GI pathogen (Salmonella, Giardia),
    • If routine cultures are negative,
A
  • In the immunocompetent:
    • Always address fluid/electrolyte loss, particularly in children.
      • For mild diarrhea can use pedialyte or mineral water plus saltine crackers;
      • for moderate diarrhea can use Oral Rehydration Solution (ORS);
      • for serious diarrhea may need i.v., fluids
    • If noninflammatory diarrhea
      • e.g., due to rotavirus, noroviruses, ETEC, C. perfringens, S. aureus):
      • also give symptomatic therapy, unless there is no resolution (then might consider parasites).
    • Symptomatic therapy for noninflammatory diarrhea:
      • Absorbants (Attapulgite, e.g., Kaopectate in Canada)
      • Anti-intestinal motility agents (loperamide, i.e., Immodium A-D; diphenoxlate-atropine, i.e., Lomotil)
        • Do not use for inflammatory diarrheas! Prolongs contact of invasive bacteria with intestines.
      • Anti-secretory agents (bismuth salts, e.g., Peptobismol)
    • If inflammatory diarrhea (blood, fever, fecal leukocytes):
      • also give antimicrobials to adults, e.g., quinolones.
      • Be cautious with children - could be EHEC.
  • In AIDS / immunocompromised patients
    • If routine cultures show a typical GI pathogen (Salmonella, Giardia),
      • treat this first with appropriate antimicrobials.
    • If routine cultures are negative,
      • then treat symptomatically, e.g., with loperamide-
      • if no response, then order more extensive cultures.
23
Q

Summary

  • Gastroenteritis caused by infectious agents/
  • Infectious gastroenteritis requires/
  • A number of infectious agents are able to cause gastroenteritis; typically, each infectious agent causing gastroenteritis is associated with/
  • Infectious agents use several mechanisms/
  • diagnosing which specific pathogen is responsible for a particular case of gastroenteritis is often/
  • Treatment of gastroenteritis varies according to disease severity;
    • milder cases
    • more serious cases
    • all cases of gastroenteritis
A
  • Gastroenteritis caused by infectious agents is one of the most common illnesses seen by physicians; this illness can be life-threatening in certain situations.
  • Infectious gastroenteritis requires that the infectious agent overcome the defenses naturally present in the GI tract; the likelihood of this happening depends upon both the virulence of the pathogen and the status of the host.
  • A number of infectious agents are able to cause gastroenteritis; typically, each infectious agent causing gastroenteritis is associated with a specific epidemiologic scenario.
  • Infectious agents use several mechanisms (including enterotoxin-mediated secretion, malabsorption, inflammation, and altered motility) to induce the diarrheal symptoms of gastroenteritis.
  • diagnosing which specific pathogen is responsible for a particular case of gastroenteritis is often difficult; this is usually attempted only for serious or chronic cases.
  • Treatment of gastroenteritis varies according to disease severity;
    • milder cases often can be treated symptomatically,
    • antimicrobials should be considered in more serious cases.
    • Fluid/electrolyte replacement is critical for all cases of gastroenteritis.