1.3 Intermediate Filaments and Cell Polarity Flashcards
Where are intermediate filaments found (2)?
- in vertebrates, nematodes and mollusks
- in cytoplasm of cells prone to mechanical stress
Where are intermediate filaments not found?
animals that have rigid exoskeletons
Intermediate filaments do not use [ ], unlike actin and tubulin.
NTPs
Intermediate filaments (IF) are closely related to [ ].
nuclear lamins
What is the function of nuclear lamins?
form meshwork in nuclear envelope, and provide anchoring point for chromosomes
Nuclear lamins duplicated, and duplicates evolved into [ ].
rope-like IF
IF are much more [ ] than actin and tubulin.
diverse
IF proteins are encoded by [ ] different genes in humans, with functions specific to cell type.
70
All intermediate filaments are [ ].
elongated proteins
Conserved [ ] domain.
central alpha-helical domain
Parallel dimers used to form [ ].
anti-parallel tetramer
Tetramer lacks [ ] (both ends are the [ ]), unlike actin and tubulin.
- polarity
- same
[ ] stack laterally to form the filament. Held together through [ ] interactions.
- Eight
- hydrophobic
Intermediate filaments are very [ ].
flexible, stable and difficult to break
What is the most diverse type of IF proteins?
keratin
[ ] found in human genome. Approximately [ ] types of keratins in human epithelial cells. Approximately [ ] specific to hair and nail cells.
- 54
- 20
- 10
Keratin filaments are [ ] of type 1 and type 2 keratin proteins.
equal proportion
What are the characteristics of type 1 and type 2 keratin?
- Type 1 keratin: acidic
- Type 2 keratin: neutral/basic
Type 1 and 2 form a [ ] used to make filaments.
heterodimer subunit
Keratin filament networks are cross-linked via [ ].
disulfide bonds
[ ] makes the filament networks very strong, and survive death of the cell
cross-linking
Keratin filaments impart strength on these specialized epithelial cells by anchoring intermediate filaments at the sites called [ ].
desmosomes and hemidesmosomes.
What site type are desomosomes and hemidesmosomes?
- desmosomes: site of cell-cell contact
- site of cell-matrix contact
What is filaggrin?
accessory protein that bundles keratin filaments in outermost layers of the skin. Imparts greater toughness in the outer layer
Individuals with filaggrin mutations are predisposed to [ ].
eczema
What is epidermolysis bullosa simplex?
caused by keratin mutations, slightest mechanical stress ruptures basal cells and produces blisters
Where are neurofilaments found?
in high concentration in axons of vertebrate neurons
What are the three types of neurofilaments?
- NF-L
- NF-M
- NF-H
What is ALS (3)?
- amyotrophic lateral sclerosis (ALS) also known as Loug Gehrig’s disease
- associated with an abnormal assembly of neurofilaments in motor neuron cell bodies and axon
- degeneration of axons leads to muscle atrophy and death
In mouse model, ALS symptoms arise with [ ].
overexpression of NF-L or NF-H
What are plakins?
linker proteins that connect intermediate filaments to other cytoskeletal structures
What are plectin?
a type of plakin protein that links intermediate filaments to microtubules, actin filaments, and myosin filaments, and the plasma membrane
Plectin and other plakins interact with [ ] that connect the cytoskeleton to the nuclear envelope.
protein complexes
The protein complexes consist of [ ] proteins and [ ] proteins.
- SUN
- KASH
Where are the SUN and KASH proteins located?
- SUN proteins are in the inner nuclear membrane
- KASH proteins are in the outer nuclear membrane
SUN and KASH proteins bind to each other in the [ ].
lumen of nuclear envelope
SUN and KASH connect the [ ] and [ ].
nuclear and cytoplasmic cytoskeletons
SUN proteins bind to [ ].
nuclear lamina or chromosomes
KASH proteins bind to [ ].
actin filaments (directly) and microtubules and IF (indirectly through motor proteins and plaskins, respectively)
The linkage between cytoplasmic and nuclear cytoskeleton facilitates [ ] (3).
- chromosome movement during meiosis
- nuclear migration
- cytoskeletal organization
What is cell polarity?
refers to the asymmetry of a cell’s structure and organization
Cell polarity determines [ ] (3).
- direction of protein secretion
- signaling, orientation of cell division
- path of migration
Cells polarize in response to [ ].
intracellular and extracellular cues
Cytoskeleton acts to transduce [ ] and generate [ ].
- polarity signals
- cellular organization and behavior
What are the Rho family of proteins (3)?
- Cdc42
- Rac
- Rho
What are Rho family proteins?
monomeric GTPases that act as molecular switches. They cycle between active GTP-bound and inactive GDP-bound state
[ ] determine the active state of the rho family of proteins.
regulatory proteins
What are GEFs?
guanine nucleotide exchange factors. required to activate GTPases by GDP with GTP
What are GAPs?
GTPase activating proteins. The inactivate GTPases by promoting hydrolysis of GTP
What are GDIs?
guanine nucleotide dissociation inhibitors. Bind to GDP-bound forms and block GTP exchange by GEF proteins
Active Cdc42 promotes [ ].
formation of filopodia on cell surface
Rac promotes [ ].
actin polymerization at cell periphery, and sheet-like protrusions
Rho promotes [ ].
bundling of myosin filaments in stress fibers of non-muscle cells
[ ] is most highly conserved and often serves as a master regulatory of cell polarity.
Cdc42
Clusters of Cdc42 transmits a signal that activates a protein called [ ].
formin
Formin causes the assembly of [ ].
actin filaments
What is the function of PAR proteins?
generate anterior-posterior polarity
Stationary cells [ ] polarity over the life of the cell.
maintain
Cell migration requires [ ] polarity.
dynamic
Polarization also allows for protrusion of [ ], which is driven through [ ].
- leading edge
- nucleation of branced actin filaments
Rac promotes the formation of [ ].
branched actin networks in lamellidodium
Rho promotes [ ].
the formin-dependent nucleation and elongation of staight actin filaments
Rock leads to [ ] and activates [ ].
- downstream inactivation of an actin-destabilizing protein
- myosin. Along with actin bundle formation, this increases contractility at the rear of the cell
External signals can drive the process of cell migration via [ ].
chemotaxis
What is chemotaxis?
the movement of a cell towards or away from a diffusible chemical source
[ ] triggers Rho family proteins.
ligand binding at the receptor
Neutrophils can detect [ ] which enables them to migrate towrads bacterial targets.
low concentrations of select diffusible peptides derived from bacterial proteins