Week 8 Flashcards
Difference between B cell and T cells in terms of antigen presentation
B cells can recognize antigen in its native form as soluble protein, unlike T cells which require antigen to be degraded and presented on the surface of an antigen presenting cell in the context of MHC
How does primary antibody diversity occur in B cells? Where?
V(D)J rearrangement and junctional diversity - Bone marrow (variable region)
How does affinity maturation work in B cells? What type of mutations? Where?
Somatic hypermutations making certain antibodies better and selecting for them. Lymph node (Fc Region)
Describe Ig Isotype Switching? Where?
biological mechanism that changes a B cell’s production of antibody from one class to another; always starts IgM? Lymph node (Fc region)
How do B cells act as APCs?
bring in a soluble protein antigen by receptor-mediated endocytosis. and present it to activated or memory helper T cells
What are CDRs?
Complementarity-determining regions (CDRs) are part of the variable chains in immunoglobulins (antibodies) and T cell receptors, generated by B-cells and T-cells respectively, where these molecules bind to their specific antigen; Give B cell receptors their specificity
How is the antibody secreted from the B cell?
Through RNA splicing, which cuts off its membrane bound domain
Does light or heavy chain determine isotype?
Heavy
What does the Fc region bind to?
C3b and Fc receptor on phagocytic cells
How many variable and constant regions do the heavy and light chains have?
Heavy: 3 constant, 1 variable
Light: 1 constant, 1 variable
What do V L C D stand for in Ig Locus
V - variable
L- leader sequence
C- constant
D - diversity (only found in heavy chain locus)
Between the V and C exons there are what?
J- joining segments
What is changed in isotope switching/class recombination?
Only the germline code(variable region) but does not generate receptor diversity to bind antigen- alters Ig function
What is the first isotype to be expressed in B cells? What is the other isotype which is co-expressed in native B cells?
IgM, IgD
IgM has great ___? How?
Avidity; sum of affinities of all receptors that hold it together
What Ig isotype causes agglutination of incompatible blood types?
IgM
What is the most prevalent isotype in serum?
IgG
How many subclasses of IgG? Name them? Important 2?
IgG(1-4); 1 & 3 critical for opsonization and complement activation
Whats unique about IgG in terms of its size?
Small so it can cross placenta unlike IgM; can provide passive immunity
What is IgG important for?
Resistance against Viruses + Bacteria + Bacterial Toxins
- Think _G_Ps mainly deal with antibiotics and antivirals
What is IgE important for?
Allergies and Infections (attaches to basophils and mast cells (as do IgG)); Think EWWWWW0- allergies/anaphylaxiz/infections/helminths
Who is the poor useless Isotype?
IgD; this _D_um guy does nothing
What does IgA do? Subclasses?
Ascends to mucosal membranes/glandular secretions; its a dimer joined by J chain; IgA(1-2)
In bone marrow what are steps of B cell maturation
Pro B cell –> Pre-B cell –> Immature B cells (then goes through negative selection)–> Naive
When are BCRs expressed in the steps of B cell maturation?
Starting in preB cells (only one chain) by next step complete antigen receptor
What V/D/J genes do the heavy and light chains possess?
Heavy: V D J
Light: V J
What allows for the diversity of our antibodies?
Random recombination of limited set of inherited germinline DNA
How many possible B-cell clones from the limited genes in the Ig locus?
10^12
How many alleles for the heavy chain? How many for light chain? What are they?
1;2; k and lambda(only one of them expressed due to bi-allelic exclusion)
What nucleotides are added in DNA repair which contributes to junctional diversity?
P and N
Does affinity maturation occur in plasma cells or memory cell?
Memory
How does somatic hypermutation induce affinity maturation?
Activated B cells migrate into follices to form germinal centers where they proliferate producing a lot of antbodies resulting in decreasing levels of antigens so only B cells with high affinity to antigen can bind to low levels of antigen and survive;
B cells mutate their antibody genes in the dark zone of the germinal center; those with high affinity for antigen can captuare and process it on MHC II molecules for CD4+ cells’ B cells that can present antigents to Tfh cells will receive survival and cytogenic cytokine(IL-20( via CD40 and reenter dark zone to undergo additional mutations
What region of the heavy chain does isotype switching occur in?
Fc
What initiates somatic hypermutation?
Activation induced Cytidine Deaminase (AID)
Successful B cells which underwent somatic hypermutation express what to re-enter dark zone?
CXCR4
What important molecules/cytokines to TFH provide to allow for affinity maturation in B cells?
CD40 & IL-21
Immature B cells express what Igs ? Naive B cells express?
IgM; IgM & IgD
Describe steps of isotype switching?
- B cell is activated at periphery of primary follicle (takes in pathogen presents it on MHC II to CD4 helper T cell)
2.Migrates into follicle and proliferates forming dark zone - Helper T cells influnece cytokine switching through cytokines; cytokine switching causes isotype switching
- B cells leave into light zone
What cytokine release by Tfh stimulates isotype switching to IgE
IL-4
What cytokine release by Tfh stimulates isotype switching to IgA
Those released in mucosal tissues; TGF beta, BAFF, Il-5
How does isotype switching occur genetically speaking?
Depending on the transcription factor it binds to switcxh gergion of IgM and IgG chain and brings them together cutting out intervening DNA(looping it out_; based on what is looped out different isotypes)
What cytokine promotes change to IgG1 and IgG3
IL-21
Describe oponization, complement activation, neutralization by antibodies?
Neutralization- binds to antigen so it cannot affect cells
Opsonization- Fc tail of antibody sticks out so it can bind to phagocytes (such as NK cells which have Fc receptors)
Complement activation- can activate complement through Fc tail (through lysis, phagocytosis or inflammation)
What happens in Graves disease?
Antibody stimulates TSH receptor without hormones causing an overproduction of thyroid homrones
What causes myasthenia gravis?
Antibody inhibits binding of NT to receptor at NMJ causing muscle fatigue/weakeness
Function of IgG isotype?
▪ Neutralization of microbes and toxins
▪ Opnsonization of antigens for phagocytosis by macrophages and neutrophils
▪ Activation of the classical pathway of complement
▪ Antibody-dependent cellular cytotoxicity mediated by NK cells
▪ Neonatal immunity – transfer of maternal antibody across placenta and gut
▪ Feedback inhibition of B-cell activation
Function of IgM isotype?
Activation of the classical pathway of complement
Describe antibody dependent cellular cytotoxicity
IgG1 and IgG3 bind to antigens on the surface of infected cells, and their Fc regions are recognized by an Fcγ receptor on natural killer (NK) cells.
The NK cells are activated and kill the antibody-coated cells.
Involved in asthma
What Ig isotopes have an Fc region recognized by Fc-gamma receptor of NK cells
IgG1 and IgG3
What are the best antibodies at fixing complement
IgG ; they fix the C1 structure and allow for the cascade to begin
What produces IgA ?
Plasma cells in the lamina propia
Describe location of IgA and process of its release?
The dimeric IgA binds to a poly-Ig receptor in the lamina propria and is actively transported through epithelial cells through endocytosis and then secreted with a portion of the polyIg receptor
What happens when B cells are activated
- Express proteins that promote survival
- Present antigens to T cells
- Increase expression of cytokine reeptors to make them more responsive to them
- Increased expression of CCR7 allowing for migration from follicle to T-cell zone
- Generate plasma cells for antibody secretion
What is expressed to allow activated B cells to go to T cell zone?
CCR7
What does genetic deficiency in CD40l cause?
Genetic deficiency of CD40 L greatly reduces class switching and causes abnormally high level of IgM, “hyper-IgM” syndrome 1
Patients are “immune” from developing allergies but get reccurrent sinopulmonary bacterial infections
T-dependent vs T-independent antibody responses? When?
Antibody responses to protein antigens require T cell help, and the antibodies produced typically show isotype switching and are of high affinity ; Nonprotein (e.g., polysaccharide) antigens are able to activate B cells without T cell help but require other signals (e.g. complement protein)
Whats produced in T-dependent vs T-independent antibody responses?
T-dependent- ,memory cells and long lived plasma cells
T-independent- mainly IgM, low affinity anitbodies, short lived plasma cells
How do TI-1 antigens work?
combination of the repeated structure cross-linking with the B-cell receptor with the PRR is enough to cause the B-cell to undergo proliferation and differentiation;
usually polysaccharides
Difference in high concentration vs low concentration TI-1 antigen response?
At high concentrations they elicit a polyclonal response.
At low concentrations these antigens can elicit a specific antibody response
How do TI-2 antigens work?
usually linear polymeric antigens that
have a repeating unit structure – such as polysaccharides. The repeating
structure allows simultaneous binding to, and cross-linking of, multiple
BCRs. This massive BCR cross-linking is thought to provide a sufficient
activation signal to over-ride the need for T cell help.
usually polymers
TI-2 cells can only activate ___ cells
mature
T/F ●Sometimes there is cytokine “help” and then the isotype can change to IgG for TI-2 antigens
T
4 types of hypersensitivies
1 - Allergies/Atophy/Anaphylaxis
2- Antibody recognizes target on cell and creates inflammatory reaction
3- Antiobody antigen immune complex formed and float in vasculature
4- Delayed; involves T cells
Type 1 hypersensitivity is mediated by what isotype
IgG
What are the 2 steps of Type 1 H
1- Sensitization - T cells picks up pathogen differentiates into Th2 which changes isotype from IgM to IgE; this attaches to Fc receptors on mast cells and sensitizes them
- 2nd exposure- Th2 cells see antigen again and activate B cells to release IgE which causes mast cell degrranulation
Type 2 H is antibody mediated/cytotoxic and is usually caused by what isotypes?
IgG , IgM
What usually causes Type 2 H
Drugs such as pencillin which fix to cell surfaces(causes death of platelets and RBCs); neutralized by anti drug IgG antibodies
What isotypes causes Type 3 H
IgA or IgG
T/F Large Ag/Ab immyune complex are hard to clear
F - Large complexes are cleared quickly; Small complexes are deposited on vessels 🡪 ligate FcR on leukocytes 🡪 tissue injury
Examples of Type 3 and Type 2 H
2- autoimmune blood disorders (hemolytic anemia, thrombocytopenia, transfusion reactions, autoimmune hemolytic anemia, fetal erythroblastosis)
3- Arthus skin reaction, serum sickness, farmer’s lung (hay-induced damage), rheumatoid arthritis, glomerulonephritis, SLE
What mediates Type 4 H
Effector T cells(Th1 cells which release cytokines and recruit phagocytes)
Examples of Type 4 H response
TB test; Poison ivy response, Patch testing for conatc dermatitis
Central vs Peripheral Tolerance
Central- Negative selection in BM/Thymus ; Peripheral- mechanism which limits activity of immune response
Give examples of peripheral tolerance
T reg cells; Clonal anergy/exhaustion; Clonal deletion
Where are autoantigens presented in the thymus
Medullary cells
By what are autoantigens expressed in thymus
Autoimmune regulatore gene (AIRE)
What happens when you are deficiency in AIRE
Can get APECED ; destruction of endocrine tissues islet cells(insulin production) and susceptible to fungal infections
T/F T reg cells have some affinity for self
True= they are self reactive in thymus but when they are activated they turn the immune response down
Does positive selection occur in B cells
Nope ; just T cells
What are immunoprivileged tissues
tissues that the immune system does not actively sample antigens from ex brain, testes, uterus
makes them resistant to inflammation however damage to this site can induce a dangerous autoimmune response
2 main functions of peripheral tolerance
o Control any self-reactive cells that “slipped through the cracks” of central tolerance
o Induce tolerance to important harmless antigens (i.e. foods) that are not present during thymic selection
**in peripheral lymphoid organs
Anergy
a state of hyporesponsiveness/inactivation of T cells because it doesn’t get co-stimulation