Week 3 Flashcards
Problems with replication
Two locations likely to differ in several things, not just presence/absence of
whelks
Even though there are now three counts, the experimental treatments have
not been replicated
The experimental treatments have now been replicated
The three counts in each plot are valid sub-samples
Problems with replication card 2
Pseudoreplication in space
Aim Compare %N in leaves of different species Should Sample leaves from at least two trees of each species
Problems with replication card 3
Pseureplication in time Aim Compare numbers in Wet and Dry Should Sample Wet and Dry in at least two years
Problems with confounding
Placebo effect
Experiment testing effect of Vitamin C on duration of colds
Over 50% of participants guessed correctly which group they were in
Those showed a “placebo” effect
Problems with independence
Experiment objective Test effects of “stuff” on physiology of fish, measured by swimming, breathing, etc. Procedure Catch fish and assign them to the two experimental treatments in turn
Problems with independence card 2
Experiment objective Test effects of “stuff” on physiology of fish, measured by swimming, breathing, etc. Procedure Catch fish and assign them to the two experimental treatments in turn Problem Fish will differ before experiment starts Solution Assign fish randomly
Problems with independence card 3
- Study looking at plants and animals in rock pools: randomly select pools at the start
- Returning to the same pools on later times is likely to give non-independent results
- Study looking at plants and animals in rock pools: randomly select pools at the start
- One solution - if possible and appropriate - is to randomly select new pools
Enhancements to design
Use a balanced design when possible
Balanced designs have equal numbers of replicates in all treatments
Analysis is usually easier
The effects of violations of assumptions are usually minimised
May conflict with the requirements of a stratified sampling scheme
Use a multifactor design when possible
These designs are usually more efficient (more powerful for same effort)
These designs are usually more informative
Ensure that all combinations of treatments are included
This is referred to as an orthogonal design
Non-orthogonal designs can be difficult to analyse
Enhancements to design card 2
Hypothesis (HA) Salinity and temperature affect survival of Trochus larvae Experiment Measure survival of larvae in different combinations of salinity and temperature
Balanced All “cells” have the same number of replicates Complete All combinations of factors – salinity and temperature – are included
When designing a study, with replication, what do you need?
e. g. whelks study
- you need more than at least two areas with the predators, and two areas without the predators
- the areas need to be spread out
- you can use sub samples so that it’s easier to count the number of whelks
When is replication likely to be wrong?
There isn’t a wrong type of replication, more often it’s not enough replication that’s the problem
Placebo effect in human studies
In human studies we have to worry and be very careful on placebo type effects
In a fish catching study, why should the ease of which fish will be caught be mixed up?
They should be mixed up so that the fish that are caught are a suitably random selection of the population.